Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041268 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 4.1e-81 304.7 153 100.0
CSS0006996 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 4.6e-77 291.2 161 94.4
CSS0044007 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 1.9e-62 242.7 142 88.7
CSS0019813 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 6.1e-61 237.7 142 87.3
Dinv44116 Davidia involucrata HOM05D006638 ORTHO05D008246 1.3e-47 193.4 139 74.1
Rhsim05G0215700 Rhododendron simsii HOM05D006638 ORTHO05D008246 1.3e-47 193.4 141 74.5
Hma1.2p1_0001F.1_g001240 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 7.5e-43 177.6 122 76.2
Lj7A537T49 Lonicera japonica HOM05D006638 ORTHO05D008246 8.3e-42 174.1 152 69.1
QL04p037061 Quercus lobata HOM05D006638 ORTHO05D008246 4.1e-41 171.8 120 74.2
TAR636G0703 Trochodendron aralioides HOM05D006638 ORTHO05D008246 4.5e-40 168.3 139 67.6
Haze_02520 Corylus avellana HOM05D006638 ORTHO05D008246 2.3e-39 166.0 107 77.6
ClCG05G000210 Citrullus lanatus HOM05D006638 ORTHO05D008246 1.1e-38 163.7 119 72.3
SalBow1G6174 Salvia bowleyana HOM05D006638 ORTHO05D008246 1.9e-38 162.9 102 78.4
COL.COLO4_12484 Corchorus olitorius HOM05D006638 ORTHO05D008246 2.5e-38 162.5 111 76.6
Prupe.2G137100 Prunus persica HOM05D006638 ORTHO05D008246 3.3e-38 162.2 144 61.8
RcHm_v2.0_Chr1g0349031 Rosa chinensis HOM05D006638 ORTHO05D008246 4.3e-38 161.8 111 73.0
PGSC0003DMG400025975 Solanum tuberosum HOM05D006638 ORTHO05D008246 9.5e-38 160.6 112 75.0
CANSAT56G0739 Cannabis sativa HOM05D006638 ORTHO05D008246 1.2e-37 160.2 126 66.7
CsaV3_3G007360 Cucumis sativus L. HOM05D006638 ORTHO05D008246 1.2e-37 160.2 128 68.0
Solyc01g090880.3 Solanum lycopersicum HOM05D006638 ORTHO05D008246 1.6e-37 159.8 112 75.0
Glyma.03G033200 Glycine max HOM05D006638 ORTHO05D008246 2.1e-37 159.5 108 74.1
Manes.17G011000 Manihot esculenta HOM05D006638 ORTHO05D008246 2.1e-37 159.5 141 67.4
Potri.004G225600 Populus trichocarpa HOM05D006638 ORTHO05D008246 2.1e-37 159.5 135 64.4
CiPaw.14G025400 Carya illinoinensis HOM05D006638 ORTHO05D008246 2.8e-37 159.1 108 75.0
Atru.BG.68.p Acer truncatum HOM05D006638 ORTHO05D008246 3.6e-37 158.7 104 78.8
MELO3C005958.2 Cucumis melo HOM05D006638 ORTHO05D008246 3.6e-37 158.7 128 67.2
MSTRG.4914 Avicennia marina HOM05D006638 ORTHO05D008246 4.7e-37 158.3 102 78.4
Nn2g12739 Nelumbo nucifera HOM05D006638 ORTHO05D008246 4.7e-37 158.3 144 62.5
Phvul.010G071600 Phaseolus vulgaris HOM05D006638 ORTHO05D008246 4.7e-37 158.3 132 62.9
TWI23G0519 Tripterygium wilfordii HOM05D006638 ORTHO05D008246 4.7e-37 158.3 111 75.7
Aqoxy7G00747 Aquilegia oxysepala HOM05D006638 ORTHO05D008246 8.0e-37 157.5 107 76.6
MD07G1114500 Malus domestica HOM05D006638 ORTHO05D008246 8.0e-37 157.5 121 67.8
Sabra01G0171300 Salix brachista HOM05D006638 ORTHO05D008246 8.0e-37 157.5 104 77.9
Atru.chr5.234 Acer truncatum HOM05D006638 ORTHO05D008246 1.0e-36 157.1 149 62.4
Oeu000021.1 Olea europaea HOM05D006638 ORTHO05D008246 1.0e-36 157.1 108 75.9
Sopen01g036620 Solanum pennellii HOM05D006638 ORTHO05D008246 1.0e-36 157.1 108 75.9
Cpa.g.sc49.148 Carica papaya HOM05D006638 ORTHO05D008246 1.8e-36 156.4 129 67.4
FvH4_7g11040 Fragaria vesca HOM05D006638 ORTHO05D008246 1.8e-36 156.4 108 74.1
Thecc.01G384300 Theobroma cacao HOM05D006638 ORTHO05D008246 1.8e-36 156.4 138 64.5
CAN.G1872.5 Capsicum annuum HOM05D006638 ORTHO05D008246 2.3e-36 156.0 112 73.2
Nitab4.5_0000859g0190 Nicotiana tabacum HOM05D006638 ORTHO05D008246 2.3e-36 156.0 107 74.8
DCAR_029874 Daucus carota HOM05D006638 ORTHO05D008246 3.0e-36 155.6 128 65.6
FAN06G4764 Fragaria x ananassa HOM05D006638 ORTHO05D008246 3.0e-36 155.6 142 60.6
Migut.N01611 Erythranthe guttata HOM05D006638 ORTHO05D008246 5.2e-36 154.8 147 59.9
Lalb_Chr07g0190301 Lupinus albus HOM05D006638 ORTHO05D008246 5.2e-36 154.8 108 71.3
SGA_v2.0_scaffold43G16517 Striga asiatica HOM05D006638 ORTHO05D008246 5.2e-36 154.8 149 61.1
THA.LOC104809455 Tarenaya hassleriana HOM05D006638 ORTHO05D008246 6.8e-36 154.5 114 74.6
FAN03G2254 Fragaria x ananassa HOM05D006638 ORTHO05D008246 8.9e-36 154.1 142 59.9
Nitab4.5_0011151g0010 Nicotiana tabacum HOM05D006638 ORTHO05D008246 8.9e-36 154.1 108 74.1
Actinidia33482 Actinidia chinensis HOM05D006638 ORTHO05D008246 1.2e-35 153.7 117 72.6
FAN10G1288 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.5e-35 153.3 142 59.9
FAN10G2039 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.5e-35 153.3 142 59.9
Eucgr.H00160 Eucalyptus grandis HOM05D006638 ORTHO05D008246 5.7e-35 151.4 150 59.3
arahy.Tifrunner.gnm1.ann1.WQW1G6 Arachis hypogaea HOM05D006638 ORTHO05D008246 7.5e-35 151.0 101 75.2
Ca_19858_v3 Cicer arietinum L. HOM05D006638 ORTHO05D008246 1.3e-34 150.2 105 72.4
Thhalv10008640m.g Eutrema salsugineum HOM05D006638 ORTHO05D008246 1.3e-34 150.2 106 71.7
PSO170G5140 Papaver somniferum HOM05D006638 ORTHO05D008246 1.3e-34 150.2 152 60.5
unitig_748.g7114 Utricularia gibba HOM05D006638 ORTHO05D008246 1.3e-34 150.2 134 60.4
BraA09t41748Z Brassica rapa HOM05D006638 ORTHO05D008246 1.7e-34 149.8 142 56.3
Duzib133G1291 Durio zibethinus HOM05D006638 ORTHO05D008246 2.2e-34 149.4 136 60.3
Lj3g0022109 Lotus japonicus HOM05D006638 ORTHO05D008246 2.2e-34 149.4 134 57.5
Hund17047 Selenicereus undatus HOM05D006638 ORTHO05D008246 2.2e-34 149.4 101 76.2
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 2.2e-34 149.4 108 74.1
arahy.Tifrunner.gnm1.ann1.B645Y9 Arachis hypogaea HOM05D006638 ORTHO05D008246 3.7e-34 148.7 108 70.4
PGR142G0596 Punica granatum HOM05D006638 ORTHO05D008246 3.7e-34 148.7 150 60.0
Rhsim01G0151400 Rhododendron simsii HOM05D006638 ORTHO05D008246 6.4e-34 147.9 105 70.5
Sed0019776 Sechium edule HOM05D006638 ORTHO05D008246 6.4e-34 147.9 105 72.4
CDE02G4315 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 8.3e-34 147.5 107 72.0
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 8.3e-34 147.5 120 65.0
Sp1g10860 Schrenkiella parvula HOM05D006638 ORTHO05D008246 1.4e-33 146.7 106 69.8
EL10Ac1g00836 Beta vulgaris HOM05D006638 ORTHO05D008246 1.8e-33 146.4 101 76.2
BcaC07g41715 Brassica carinata HOM05D006638 ORTHO05D008246 1.8e-33 146.4 141 56.0
BcaC07g42567 Brassica carinata HOM05D006638 ORTHO05D008246 1.8e-33 146.4 110 68.2
Aa31LG1G2420 Aethionema arabicum HOM05D006638 ORTHO05D008246 2.4e-33 146.0 111 67.6
HanXRQChr12g0384211 Helianthus annuus HOM05D006638 ORTHO05D008246 2.4e-33 146.0 127 63.0
Medtr4g027430 Medicago truncatula HOM05D006638 ORTHO05D008246 2.4e-33 146.0 105 70.5
C08p47510 Brassica napus HOM05D006638 ORTHO05D008246 5.4e-33 144.8 141 56.0
Gorai.008G106400 Gossypium raimondii HOM05D006638 ORTHO05D008246 5.4e-33 144.8 110 69.1
Psat0s3685g0120 Pisum sativum HOM05D006638 ORTHO05D008246 7.0e-33 144.4 106 68.9
CARHR012550 Cardamine hirsuta HOM05D006638 ORTHO05D008246 9.2e-33 144.1 106 68.9
AL1G23530 Arabidopsis lyrata HOM05D006638 ORTHO05D008246 1.6e-32 143.3 110 66.4
Carub.0001s1192 Capsella rubella HOM05D006638 ORTHO05D008246 1.6e-32 143.3 109 67.0
Cc02_g24450 Coffea canephora HOM05D006638 ORTHO05D008246 2.0e-32 142.9 121 65.3
Gohir.A12G095100 Gossypium hirsutum HOM05D006638 ORTHO05D008246 2.0e-32 142.9 128 64.8
Gohir.D12G097700 Gossypium hirsutum HOM05D006638 ORTHO05D008246 2.0e-32 142.9 112 69.6
Sc23g0003780 Simmondsia chinensis HOM05D006638 ORTHO05D008246 2.0e-32 142.9 153 59.5
AT1G12244 Arabidopsis thaliana HOM05D006638 ORTHO05D008246 4.6e-32 141.7 104 67.3
ECA234G0121 Erigeron canadensis HOM05D006638 ORTHO05D008246 5.9e-32 141.4 106 67.9
BolC8t52292H Brassica oleracea HOM05D006638 ORTHO05D008246 1.0e-31 140.6 141 54.6
TPR.G27556 Trifolium pratense HOM05D006638 ORTHO05D008246 1.3e-31 140.2 141 54.6
Lsat_1_v5_gn_4_45501 Lactuca sativa HOM05D006638 ORTHO05D008246 2.1e-29 132.9 131 58.8
Lj1g0022300 Lotus japonicus HOM05D006638 ORTHO05D008246 2.3e-28 129.4 134 53.7
HPP92_022319 Vanilla planifolia HOM05D006638 ORTHO05D008246 4.0e-28 128.6 107 65.4
VMungo0331G0589 Vigna mungo HOM05D006638 ORTHO05D008246 8.9e-28 127.5 130 55.4
HPP92_022327 Vanilla planifolia HOM05D006638 ORTHO05D008246 4.4e-27 125.2 107 63.6
TAR629G0886 Trochodendron aralioides HOM05D006638 ORTHO05D008246 7.5e-27 124.4 146 55.5
ATR0317G113 Amborella trichopoda HOM05D006638 ORTHO05D008246 6.4e-26 121.3 102 60.8
Peaxi162Scf00803g00218 Petunia axillaris HOM05D006638 ORTHO05D008246 4.1e-25 118.6 105 59.0
Zm00001eb023510 Zea mays HOM05D006638 ORTHO05D008246 2.3e-23 112.8 113 57.5
Os10g0555200 Oryza sativa ssp. japonica HOM05D006638 ORTHO05D008246 1.8e-20 103.2 115 54.8
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 7.5e-19 97.8 73 65.8
AagrBONN_evm.TU.Sc2ySwM_228.3890 Anthoceros agrestis HOM05D006638 ORTHO05D008246 2.3e-15 86.3 114 45.6
Medtr2g064700 Medicago truncatula HOM05D006638 ORTHO05D008246 4.3e-14 82.0 76 56.6
MBI04_g09497_MAGBIO Magnolia biondii HOM05D006638 ORTHO05D008246 9.5e-14 80.9 98 51.0
Mapoly0010s0011 Marchantia polymorpha HOM05D006638 ORTHO05D008246 9.5e-14 80.9 82 53.7
Lsat_1_v5_gn_6_51920 Lactuca sativa HOM05D006638 ORTHO05D008246 1.2e-13 80.5 58 67.2
Ah.01g003990 Amaranthus hybridus HOM05D006638 ORTHO05D008246 6.2e-13 78.2 59 72.9
SMO340G0150 Selaginella moellendorffii HOM05D006638 ORTHO05D008246 1.3e-10 70.5 101 41.6
FAN01G0965 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.7e-10 70.1 57 66.7
Pp3c1_23680 Physcomitrium patens HOM05D006638 ORTHO05D008246 3.8e-10 68.9 80 45.0
Medtr2g064670 Medicago truncatula HOM05D006638 ORTHO05D008246 1.4e-09 67.0 41 73.2
Solyc12g035620.2 Solanum lycopersicum HOM05D006638 ORTHO05D008246 1.4e-09 67.0 48 64.6
vmacro21035 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 6.0e-08 61.6 34 85.3
Lsat_1_v5_gn_1_125220 Lactuca sativa HOM05D006638 ORTHO05D008246 1.0e-07 60.8 73 47.9
Hma1.2p1_0001F.1_g001250 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 1.1e-06 57.4 34 82.4


User provided reference genes

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