Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041251 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D000148 2.8e-55 218.4 110 100.0
GSVIVG01018205001 Vitis vinifera HOM05D000159 ORTHO05D000148 4.1e-19 98.2 133 50.4
Potri.014G057800 Populus trichocarpa HOM05D000159 ORTHO05D000148 9.2e-19 97.1 131 49.6
TAR629G1949 Trochodendron aralioides HOM05D000159 ORTHO05D000148 6.0e-18 94.4 130 49.2
Gorai.008G107300 Gossypium raimondii HOM05D000159 ORTHO05D000148 1.0e-17 93.6 123 49.6
Aqoxy5G03857 Aquilegia oxysepala HOM05D000159 ORTHO05D000148 1.7e-17 92.8 128 49.2
Hma1.2p1_0341F.1_g130340 Hydrangea macrophylla HOM05D000159 ORTHO05D000148 2.3e-17 92.4 129 49.6
Gohir.A12G095900 Gossypium hirsutum HOM05D000159 ORTHO05D000148 6.6e-17 90.9 122 49.2
Duzib138G1333 Durio zibethinus HOM05D000159 ORTHO05D000148 8.7e-17 90.5 133 48.1
Dinv44105 Davidia involucrata HOM05D000159 ORTHO05D000148 1.1e-16 90.1 120 51.7
Cfa011131 Carpinus fangiana HOM05D000159 ORTHO05D000148 1.5e-16 89.7 118 54.2
Dinv43653 Davidia involucrata HOM05D000159 ORTHO05D000148 1.5e-16 89.7 116 50.0
Gohir.D12G098600 Gossypium hirsutum HOM05D000159 ORTHO05D000148 1.5e-16 89.7 122 49.2
Thecc.01G386500 Theobroma cacao HOM05D000159 ORTHO05D000148 2.5e-16 89.0 133 47.4
QL04p035625 Quercus lobata HOM05D000159 ORTHO05D000148 7.3e-16 87.4 136 46.3
CSS0018684 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D000148 1.2e-15 86.7 135 47.4
vmacro13462 Vaccinium macrocarpon HOM05D000159 ORTHO05D000148 1.2e-15 86.7 111 52.3
Cc02_g24550 Coffea canephora HOM05D000159 ORTHO05D000148 2.8e-15 85.5 131 43.5
Manes.05G050800 Manihot esculenta HOM05D000159 ORTHO05D000148 2.8e-15 85.5 132 44.7
Lj9A562T32 Lonicera japonica HOM05D000159 ORTHO05D000148 8.1e-15 84.0 131 48.1
Sabra02G0110800 Salix brachista HOM05D000159 ORTHO05D000148 2.4e-14 82.4 126 45.2
Nn6g33926 Nelumbo nucifera HOM05D000159 ORTHO05D000148 3.1e-14 82.0 124 49.2
Ciclev10020532m.g Citrus clementina HOM05D000159 ORTHO05D000148 9.0e-14 80.5 133 42.9
MELO3C005966.2 Cucumis melo HOM05D000159 ORTHO05D000148 3.4e-13 78.6 123 48.0
CsaV3_3G007450 Cucumis sativus L. HOM05D000159 ORTHO05D000148 3.4e-13 78.6 124 48.4
CiPaw.13G030600 Carya illinoinensis HOM05D000159 ORTHO05D000148 4.4e-13 78.2 127 47.2
Rhsim07G0032800 Rhododendron simsii HOM05D000159 ORTHO05D000148 5.8e-13 77.8 121 48.8
Gohir.A11G077800 Gossypium hirsutum HOM05D000159 ORTHO05D000148 1.7e-12 76.3 130 41.5
Nn1g00969 Nelumbo nucifera HOM05D000159 ORTHO05D000148 2.9e-12 75.5 128 41.4
PSO063G5655 Papaver somniferum HOM05D000159 ORTHO05D000148 6.4e-12 74.3 127 40.9
PSO782G4298 Papaver somniferum HOM05D000159 ORTHO05D000148 6.4e-12 74.3 127 40.9
Cpa.g.sc149.4 Carica papaya HOM05D000159 ORTHO05D000148 8.4e-12 73.9 133 41.4
Gohir.D11G082200 Gossypium hirsutum HOM05D000159 ORTHO05D000148 1.1e-11 73.6 126 41.3
Gorai.007G087900 Gossypium raimondii HOM05D000159 ORTHO05D000148 1.1e-11 73.6 126 41.3
MD07G1111600 Malus domestica HOM05D000159 ORTHO05D000148 1.9e-11 72.8 146 39.0
Actinidia22829 Actinidia chinensis HOM05D000159 ORTHO05D000148 2.4e-11 72.4 139 41.7
ClCG05G000290 Citrullus lanatus HOM05D000159 ORTHO05D000148 4.2e-11 71.6 126 43.7
Prupe.2G135000 Prunus persica HOM05D000159 ORTHO05D000148 7.1e-11 70.9 147 39.5
Atru.chr5.211 Acer truncatum HOM05D000159 ORTHO05D000148 1.2e-10 70.1 161 36.6
COL.COLO4_12462 Corchorus olitorius HOM05D000159 ORTHO05D000148 1.2e-10 70.1 136 41.2
CDE11G0748 Ceratophyllum demersum HOM05D000159 ORTHO05D000148 4.6e-10 68.2 139 37.4
Actinidia12173 Actinidia chinensis HOM05D000159 ORTHO05D000148 6.0e-10 67.8 124 46.8
Sabra14G0042000 Salix brachista HOM05D000159 ORTHO05D000148 7.8e-10 67.4 86 48.8
Actinidia22775 Actinidia chinensis HOM05D000159 ORTHO05D000148 1.3e-09 66.6 137 39.4
Oeu063208.1 Olea europaea HOM05D000159 ORTHO05D000148 1.3e-09 66.6 117 43.6
Eucgr.D02505 Eucalyptus grandis HOM05D000159 ORTHO05D000148 2.3e-09 65.9 129 41.1
DCAR_015862 Daucus carota HOM05D000159 ORTHO05D000148 5.1e-09 64.7 129 40.3
Sed0004480 Sechium edule HOM05D000159 ORTHO05D000148 1.5e-08 63.2 140 36.4
Haze_02732 Corylus avellana HOM05D000159 ORTHO05D000148 9.6e-08 60.5 108 44.4
HanXRQChr06g0168831 Helianthus annuus HOM05D000159 ORTHO05D000148 1.3e-07 60.1 99 43.4
CDE02G0489 Ceratophyllum demersum HOM05D000159 ORTHO05D000148 2.1e-07 59.3 140 38.6
VMungo1383G3157 Vigna mungo HOM05D000159 ORTHO05D000148 3.6e-07 58.5 67 50.7
MSTRG.20716 Avicennia marina HOM05D000159 ORTHO05D000148 4.8e-07 58.2 109 41.3
Phvul.008G157100 Phaseolus vulgaris HOM05D000159 ORTHO05D000148 4.8e-07 58.2 67 52.2
Lj1g0005415 Lotus japonicus HOM05D000159 ORTHO05D000148 1.1e-06 57.0 55 58.2
PGR004G1093 Punica granatum HOM05D000159 ORTHO05D000148 1.8e-06 56.2 119 39.5
TWI59G0325 Tripterygium wilfordii HOM05D000159 ORTHO05D000148 3.1e-06 55.5 110 40.9
TPR.G39073 Trifolium pratense HOM05D000159 ORTHO05D000148 4.0e-06 55.1 61 54.1
TWI23G0392 Tripterygium wilfordii HOM05D000159 ORTHO05D000148 4.0e-06 55.1 113 41.6
Glyma.11G163828 Glycine max HOM05D000159 ORTHO05D000148 6.9e-06 54.3 56 55.4
Medtr7g444860 Medicago truncatula HOM05D000159 ORTHO05D000148 6.9e-06 54.3 61 52.5
Glyma.01G075800 Glycine max HOM05D000159 ORTHO05D000148 9.0e-06 53.9 47 63.8
Psat3g157680 Pisum sativum HOM05D000159 ORTHO05D000148 9.0e-06 53.9 57 56.1


User provided reference genes

Program Settings