Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041198 Camellia sinensis var. sinensis HOM05D014704 ORTHO05D008628 8.7e-190 666.8 326 100.0
CSS0041107 Camellia sinensis var. sinensis HOM05D014704 ORTHO05D008628 4.5e-130 468.4 350 71.1
CSS0006900 Camellia sinensis var. sinensis HOM05D014704 ORTHO05D008628 6.1e-111 404.8 350 62.3
CSS0033110 Camellia sinensis var. sinensis HOM05D014704 ORTHO05D008628 5.4e-99 365.2 333 61.9
CSS0014257 Camellia sinensis var. sinensis HOM05D014704 ORTHO05D008628 2.7e-98 362.8 354 58.2
CSS0008735 Camellia sinensis var. sinensis HOM05D014704 ORTHO05D008628 1.4e-91 340.5 335 56.7
CSS0033289 Camellia sinensis var. sinensis HOM05D014704 ORTHO05D008628 5.4e-91 338.6 311 60.8
CSS0008493 Camellia sinensis var. sinensis HOM05D014704 ORTHO05D008628 4.6e-90 335.5 335 56.4
CSS0027761 Camellia sinensis var. sinensis HOM05D014704 ORTHO05D008628 6.2e-55 218.8 341 44.0
CSS0046152 Camellia sinensis var. sinensis HOM05D015870 ORTHO05D008628 9.7e-24 115.2 74 73.0
CSS0007065 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 2.6e-21 107.1 75 64.0
CSS0021922 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 2.6e-21 107.1 90 58.9
CSS0025772 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 2.2e-20 104.0 73 63.0
CSS0013817 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 5.0e-20 102.8 75 61.3
CSS0024495 Camellia sinensis var. sinensis HOM05D000132 ORTHO05D000058 6.5e-20 102.4 64 70.3
CSS0006552 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 2.1e-18 97.4 90 54.4
CSS0018264 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 6.1e-18 95.9 69 59.4
CSS0003582 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 4.4e-16 89.7 74 58.1
CSS0009899 Camellia sinensis var. sinensis HOM05D015870 ORTHO05D008628 1.7e-15 87.8 50 80.0
CSS0014448 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 4.8e-15 86.3 56 62.5
CSS0028595 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 4.1e-14 83.2 52 67.3
Actinidia20119 Actinidia chinensis HOM05D010691 ORTHO05D008628 3.5e-13 80.1 74 48.6
CSS0019235 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 2.5e-11 73.9 53 58.5
CSS0045163 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 2.5e-11 73.9 53 58.5
CSS0046786 Camellia sinensis var. sinensis HOM05D016873 ORTHO05D111585 9.4e-11 72.0 51 68.6
MBI18_g24630_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 1.6e-10 71.2 64 51.6
MBI17_g23155_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D004604 2.1e-10 70.9 85 38.8
CSS0048395 Camellia sinensis var. sinensis HOM05D015870 ORTHO05D008628 2.7e-10 70.5 42 76.2
MBI05_g23627_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 3.6e-10 70.1 64 50.0
MBI13_g19838_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 3.6e-10 70.1 70 48.6
MBI14_g46090_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 4.7e-10 69.7 60 48.3
CSS0049846 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 2.3e-09 67.4 49 61.2
CSS0036293 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 6.8e-09 65.9 49 59.2
Dinv05537 Davidia involucrata HOM05D041055 ORTHO05D008628 6.8e-09 65.9 74 41.9
MBI11_g15179_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 6.8e-09 65.9 59 50.8
Actinidia34913 Actinidia chinensis HOM05D000047 ORTHO05D000589 8.8e-09 65.5 78 39.7
MBI10_g31175_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 2.0e-08 64.3 60 50.0
MBI14_g35940_MAGBIO Magnolia biondii HOM05D007969 ORTHO05D008628 2.0e-08 64.3 59 50.8
vmacro07682 Vaccinium macrocarpon HOM05D000026 ORTHO05D000127 2.6e-08 63.9 71 39.4
CSS0037268 Camellia sinensis var. sinensis HOM05D013314 ORTHO05D110238 3.4e-08 63.5 35 85.7
MBI17_g00994_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 5.7e-08 62.8 64 46.9
Dinv23015 Davidia involucrata HOM05D012821 ORTHO05D008628 7.5e-08 62.4 62 50.0
CSS0021535 Camellia sinensis var. sinensis HOM05D016873 ORTHO05D110224 9.8e-08 62.0 55 60.0
MBI11_g38181_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 9.8e-08 62.0 55 47.3
Nn2g14688 Nelumbo nucifera HOM05D014704 ORTHO05D008628 1.3e-07 61.6 72 41.7
CSS0008940 Camellia sinensis var. sinensis HOM05D013314 ORTHO05D113385 1.7e-07 61.2 35 85.7
Dinv11091 Davidia involucrata HOM05D013497 ORTHO05D008628 2.2e-07 60.8 62 48.4
MBI18_g27539_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 2.2e-07 60.8 64 46.9
MBI16_g17767_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 3.7e-07 60.1 53 50.9
MBI17_g01776_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 4.8e-07 59.7 69 43.5
CSS0043930 Camellia sinensis var. sinensis HOM05D015870 ORTHO05D008628 6.3e-07 59.3 39 71.8
CSS0021277 Camellia sinensis var. sinensis HOM05D016873 ORTHO05D111299 8.3e-07 58.9 58 58.6
CSS0001433 Camellia sinensis var. sinensis HOM05D013314 ORTHO05D112856 1.1e-06 58.5 35 82.9
Dinv04833 Davidia involucrata HOM05D013497 ORTHO05D008628 1.1e-06 58.5 76 35.5
MBI19_g16318_MAGBIO Magnolia biondii HOM05D007969 ORTHO05D008628 1.4e-06 58.2 52 50.0
CSS0044758 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 2.4e-06 57.4 42 61.9
Dinv04982 Davidia involucrata HOM05D012821 ORTHO05D001422 3.1e-06 57.0 68 44.1
MBI13_g38682_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 3.1e-06 57.0 70 41.4
MBI18_g12424_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 3.1e-06 57.0 60 46.7
Dinv10876 Davidia involucrata HOM05D000047 ORTHO05D008628 5.4e-06 56.2 77 37.7
MBI05_g38502_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 5.4e-06 56.2 48 50.0
SGA_v2.0_scaffold601G53143 Striga asiatica HOM05D010691 ORTHO05D008628 9.1e-06 55.5 41 58.5


User provided reference genes

Program Settings