Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041194 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 1.2e-211 739.6 375 100.0
CSS0008381 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 2.1e-208 728.8 375 98.1
Hma1.2p1_1286F.1_g273130 Hydrangea macrophylla HOM05D006606 ORTHO05D008429 6.3e-160 567.8 377 78.0
Dinv22706 Davidia involucrata HOM05D006606 ORTHO05D008429 5.3e-159 564.7 378 77.8
Rhsim02G0071700 Rhododendron simsii HOM05D006606 ORTHO05D008429 5.9e-158 561.2 375 76.3
Cc03_g10820 Coffea canephora HOM05D006606 ORTHO05D008429 4.1e-151 538.5 382 72.5
Nitab4.5_0006519g0030 Nicotiana tabacum HOM05D006606 ORTHO05D008429 3.5e-150 535.4 377 71.9
CAN.G484.128 Capsicum annuum HOM05D006606 ORTHO05D008429 5.9e-150 534.6 381 70.9
Nitab4.5_0000978g0190 Nicotiana tabacum HOM05D006606 ORTHO05D008429 1.0e-149 533.9 377 70.8
Actinidia28936 Actinidia chinensis HOM05D006606 ORTHO05D008429 1.3e-149 533.5 303 86.8
Potri.014G146900 Populus trichocarpa HOM05D006606 ORTHO05D008429 1.7e-149 533.1 383 72.1
HanXRQChr10g0293961 Helianthus annuus HOM05D006606 ORTHO05D008429 6.5e-149 531.2 377 72.9
PGSC0003DMG401004586 Solanum tuberosum HOM05D006606 ORTHO05D008429 8.5e-149 530.8 387 69.8
Solyc12g098710.2 Solanum lycopersicum HOM05D006606 ORTHO05D008429 1.9e-148 529.6 386 70.2
Cfa008709 Carpinus fangiana HOM05D006606 ORTHO05D008429 5.5e-148 528.1 378 72.5
SalBow6G4530 Salvia bowleyana HOM05D006606 ORTHO05D008429 1.2e-147 526.9 384 72.1
CiPaw.03G116300 Carya illinoinensis HOM05D006606 ORTHO05D008429 2.7e-147 525.8 382 70.7
TAR362G1133 Trochodendron aralioides HOM05D006606 ORTHO05D008429 4.7e-147 525.0 375 70.9
MSTRG.21987 Avicennia marina HOM05D006606 ORTHO05D008429 1.8e-146 523.1 375 70.9
GSVIVG01031662001 Vitis vinifera HOM05D006606 ORTHO05D008429 8.8e-146 520.8 300 83.3
Migut.N00458 Erythranthe guttata HOM05D006606 ORTHO05D008429 7.5e-145 517.7 382 69.6
Gohir.A02G065800 Gossypium hirsutum HOM05D006606 ORTHO05D008429 1.7e-144 516.5 382 69.4
arahy.Tifrunner.gnm1.ann1.B1TKD1 Arachis hypogaea HOM05D006606 ORTHO05D008429 3.7e-144 515.4 340 75.3
Cpa.g.sc8.304 Carica papaya HOM05D006606 ORTHO05D008429 4.8e-144 515.0 391 69.6
QL10p044478 Quercus lobata HOM05D006606 ORTHO05D008429 4.8e-144 515.0 377 72.9
Sabra14G0110300 Salix brachista HOM05D006606 ORTHO05D008429 1.1e-143 513.8 430 65.1
Lalb_Chr23g0278211 Lupinus albus HOM05D006606 ORTHO05D008429 2.4e-143 512.7 375 70.1
Gorai.005G080900 Gossypium raimondii HOM05D006606 ORTHO05D008429 4.1e-143 511.9 382 68.3
Oeu013395.1 Olea europaea HOM05D006606 ORTHO05D008429 4.1e-143 511.9 298 83.2
PSO675G4216 Papaver somniferum HOM05D006606 ORTHO05D008429 4.1e-143 511.9 293 82.9
Lj4g0003716 Lotus japonicus HOM05D006606 ORTHO05D008429 7.0e-143 511.1 375 70.1
Aqoxy2G04062 Aquilegia oxysepala HOM05D006606 ORTHO05D008429 1.2e-142 510.4 380 69.7
Glyma.18G004400 Glycine max HOM05D006606 ORTHO05D008429 1.2e-142 510.4 375 69.6
Lalb_Chr11g0075821 Lupinus albus HOM05D006606 ORTHO05D008429 1.6e-142 510.0 331 76.4
Ah.04g149880 Amaranthus hybridus HOM05D006606 ORTHO05D008429 2.0e-142 509.6 378 69.0
CANSAT78G0692 Cannabis sativa HOM05D006606 ORTHO05D008429 2.0e-142 509.6 294 82.0
PSO017G6954 Papaver somniferum HOM05D006606 ORTHO05D008429 2.0e-142 509.6 376 70.2
Glyma.11G252500 Glycine max HOM05D006606 ORTHO05D008429 4.5e-142 508.4 305 80.7
Gohir.D02G071700 Gossypium hirsutum HOM05D006606 ORTHO05D008429 4.5e-142 508.4 383 68.7
arahy.Tifrunner.gnm1.ann1.V8KL47 Arachis hypogaea HOM05D006606 ORTHO05D008429 5.9e-142 508.1 378 68.3
Duzib041G0430 Durio zibethinus HOM05D006606 ORTHO05D008429 5.9e-142 508.1 381 69.0
RcHm_v2.0_Chr4g0410061 Rosa chinensis HOM05D006606 ORTHO05D008429 5.9e-142 508.1 305 80.3
TPR.G18107 Trifolium pratense HOM05D006606 ORTHO05D008429 5.9e-142 508.1 377 68.4
MELO3C017709.2 Cucumis melo HOM05D006606 ORTHO05D008429 1.3e-141 506.9 295 82.4
Nn1g09788 Nelumbo nucifera HOM05D006606 ORTHO05D008429 1.3e-141 506.9 387 70.5
Thecc.08G146500 Theobroma cacao HOM05D006606 ORTHO05D008429 2.3e-141 506.1 379 68.3
Lsat_1_v5_gn_2_48240 Lactuca sativa HOM05D006606 ORTHO05D008429 6.6e-141 504.6 384 68.5
Medtr8g097190 Medicago truncatula HOM05D006606 ORTHO05D008429 8.6e-141 504.2 379 67.5
VMungo1383G1705 Vigna mungo HOM05D006606 ORTHO05D008429 1.5e-140 503.4 379 68.6
AUR62020943 Chenopodium quinoa HOM05D006606 ORTHO05D008429 2.5e-140 502.7 377 65.8
DCAR_023800 Daucus carota HOM05D006606 ORTHO05D008429 3.3e-140 502.3 378 69.3
FAN12G1058 Fragaria x ananassa HOM05D006606 ORTHO05D008429 3.3e-140 502.3 298 81.2
FAN12G2609 Fragaria x ananassa HOM05D006606 ORTHO05D008429 3.3e-140 502.3 298 81.2
Medtr3g084950 Medicago truncatula HOM05D006606 ORTHO05D008429 3.3e-140 502.3 375 67.7
Phvul.001G263600 Phaseolus vulgaris HOM05D006606 ORTHO05D008429 3.3e-140 502.3 305 78.4
SGA_v2.0_scaffold178G39486 Striga asiatica HOM05D006606 ORTHO05D008429 3.3e-140 502.3 372 70.4
ClCG07G015730 Citrullus lanatus HOM05D006606 ORTHO05D008429 5.5e-140 501.5 352 71.6
MD04G1028100 Malus domestica HOM05D006606 ORTHO05D008429 5.5e-140 501.5 354 71.8
FvH4_4g12260 Fragaria vesca HOM05D006606 ORTHO05D008429 9.5e-140 500.7 298 80.9
Sed0006939 Sechium edule HOM05D006606 ORTHO05D008429 9.5e-140 500.7 357 71.4
TWI09G1191 Tripterygium wilfordii HOM05D006606 ORTHO05D008429 9.5e-140 500.7 375 69.3
Atru.chr3.1730 Acer truncatum HOM05D006606 ORTHO05D008429 2.1e-139 499.6 375 68.3
CsaV3_4G003370 Cucumis sativus L. HOM05D006606 ORTHO05D008429 2.1e-139 499.6 295 81.4
Ca_16442_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 3.6e-139 498.8 329 71.4
Ciclev10020648m.g Citrus clementina HOM05D006606 ORTHO05D008429 4.7e-139 498.4 291 80.1
FAN22G0658 Fragaria x ananassa HOM05D006606 ORTHO05D008429 4.7e-139 498.4 376 68.9
Prupe.1G177500 Prunus persica HOM05D006606 ORTHO05D008429 4.7e-139 498.4 365 69.6
FAN17G1362 Fragaria x ananassa HOM05D006606 ORTHO05D008429 8.0e-139 497.7 376 68.6
Oeu007220.2 Olea europaea HOM05D006606 ORTHO05D008429 8.0e-139 497.7 379 68.9
Ca_18015_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 1.0e-138 497.3 310 77.4
Psat7g076840 Pisum sativum HOM05D006606 ORTHO05D008429 1.8e-138 496.5 360 68.9
AT1G10830 Arabidopsis thaliana HOM05D006606 ORTHO05D008429 6.8e-138 494.6 371 67.1
Eucgr.C03850 Eucalyptus grandis HOM05D006606 ORTHO05D008429 2.6e-137 492.7 383 67.1
CARHR011050 Cardamine hirsuta HOM05D006606 ORTHO05D008429 3.4e-137 492.3 342 69.6
PGR119G1918 Punica granatum HOM05D006606 ORTHO05D008429 3.4e-137 492.3 294 81.0
unitig_22.g6833 Utricularia gibba HOM05D006606 ORTHO05D008429 4.4e-137 491.9 304 76.6
AL1G21760 Arabidopsis lyrata HOM05D006606 ORTHO05D008429 7.5e-137 491.1 371 66.3
Carub.0001s1037 Capsella rubella HOM05D006606 ORTHO05D008429 1.7e-136 490.0 339 70.5
Sc19g0007700 Simmondsia chinensis HOM05D006606 ORTHO05D008429 1.7e-136 490.0 382 67.5
Thhalv10007996m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 2.8e-136 489.2 373 66.8
A06p07610 Brassica napus HOM05D006606 ORTHO05D008429 3.7e-136 488.8 306 74.8
BraA06t23963Z Brassica rapa HOM05D006606 ORTHO05D008429 3.7e-136 488.8 306 74.8
Aa31LG1G4020 Aethionema arabicum HOM05D006606 ORTHO05D008429 1.4e-135 486.9 374 68.7
BolC5t29661H Brassica oleracea HOM05D000246 ORTHO05D005907 1.4e-135 486.9 352 67.9
Sp1g09530 Schrenkiella parvula HOM05D006606 ORTHO05D008429 1.4e-135 486.9 301 76.7
C05p09200 Brassica napus HOM05D006606 ORTHO05D008429 3.1e-135 485.7 352 67.6
Haze_11718 Corylus avellana HOM05D006606 ORTHO05D008429 4.5e-134 481.9 431 61.5
THA.LOC104823658 Tarenaya hassleriana HOM05D006606 ORTHO05D008429 4.5e-134 481.9 377 66.6
ATR0561G173 Amborella trichopoda HOM05D006606 ORTHO05D008429 6.6e-133 478.0 372 64.2
Peaxi162Scf00378g00631 Petunia axillaris HOM05D006606 ORTHO05D008429 5.6e-132 474.9 390 63.8
Os12g0405200 Oryza sativa ssp. japonica HOM05D006606 ORTHO05D008429 9.5e-132 474.2 336 67.9
Zm00001eb408760 Zea mays HOM05D006606 ORTHO05D008429 3.6e-131 472.2 354 64.1
FAN07G1739 Fragaria x ananassa HOM05D006606 ORTHO05D008429 4.0e-130 468.8 424 60.4
ECA238G2565 Erigeron canadensis HOM05D001656 ORTHO05D003489 1.2e-129 467.2 282 80.5
EL10Ac3g07392 Beta vulgaris HOM05D006606 ORTHO05D008429 4.1e-127 458.8 379 62.0
BcaC05g24964 Brassica carinata HOM05D006606 ORTHO05D008429 1.5e-121 440.3 374 62.3
Pp3c1_22590 Physcomitrium patens HOM05D006606 ORTHO05D008429 1.7e-120 436.8 308 67.2
Lj3A376T54 Lonicera japonica HOM05D006606 ORTHO05D008429 2.9e-120 436.0 229 91.3
SMO270G0095 Selaginella moellendorffii HOM05D006606 ORTHO05D008429 4.9e-120 435.3 291 69.1
AUR62018480 Chenopodium quinoa HOM05D006606 ORTHO05D008429 1.1e-119 434.1 338 63.9
CBR_g17600 Chara braunii HOM05D006606 ORTHO05D008429 7.8e-118 427.9 312 64.1
Mapoly0040s0091 Marchantia polymorpha HOM05D006606 ORTHO05D008429 2.3e-117 426.4 344 59.9
Mapoly0040s0092 Marchantia polymorpha HOM05D006606 ORTHO05D008429 3.9e-117 425.6 344 59.9
Pp3c17_7640 Physcomitrium patens HOM05D006606 ORTHO05D008429 5.1e-117 425.2 291 68.0
AagrBONN_evm.TU.Sc2ySwM_228.2148 Anthoceros agrestis HOM05D006606 ORTHO05D008429 1.5e-116 423.7 309 63.8
COL.COLO4_38511 Corchorus olitorius HOM05D006606 ORTHO05D008429 3.5e-102 375.9 377 56.8
Lj3A357T51 Lonicera japonica HOM05D006606 ORTHO05D008429 6.9e-98 361.7 188 90.4
Cre19.g750247 Chlamydomonas reinhardtii HOM05D006606 ORTHO05D008429 1.5e-92 344.0 292 58.2
HPP92_024552 Vanilla planifolia HOM05D006606 ORTHO05D008429 4.8e-91 339.0 318 59.4
Sopen12g033460 Solanum pennellii HOM05D006606 ORTHO05D008429 6.0e-86 322.0 279 62.7
SEGI_35229 Sequoiadendron giganteum HOM05D006606 ORTHO05D008429 6.2e-83 312.0 215 67.0
Hund24463 Selenicereus undatus HOM05D006606 ORTHO05D008429 2.0e-81 307.0 275 61.8
Psat5g098600 Pisum sativum HOM05D006606 ORTHO05D008429 5.8e-81 305.4 264 62.9
Manes.01G001200 Manihot esculenta HOM05D006606 ORTHO05D008429 2.7e-78 296.6 271 62.0
CDE09G0731 Ceratophyllum demersum HOM05D006606 ORTHO05D008429 6.9e-74 282.0 185 73.5
TPR.G26571 Trifolium pratense HOM05D006606 ORTHO05D008429 3.4e-73 279.6 376 47.3
Thhalv10000634m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 3.0e-45 186.8 242 47.5
Lj3C376T8 Lonicera japonica HOM05D006606 ORTHO05D008429 1.9e-23 114.4 151 50.3
Lj3C357T11 Lonicera japonica HOM05D006606 ORTHO05D008429 4.2e-23 113.2 152 50.0
VMungo1383G0479 Vigna mungo HOM05D000517 ORTHO05D000751 9.5e-23 112.1 94 59.6
Thhalv10029367m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 3.9e-16 90.1 63 66.7
PSO017G3682 Papaver somniferum HOM05D006606 ORTHO05D008429 7.0e-10 69.3 38 78.9


User provided reference genes

Program Settings