Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041184 Camellia sinensis var. sinensis HOM05D038144 ORTHO05D110638 1.3e-54 216.1 105 100.0
CSS0027667 Camellia sinensis var. sinensis HOM05D038144 ORTHO05D002977 9.1e-32 140.2 105 72.4
CSS0023264 Camellia sinensis var. sinensis HOM05D038144 ORTHO05D113351 1.3e-22 109.8 105 61.9
Potri.001G101100 Populus trichocarpa HOM05D002625 ORTHO05D002977 2.7e-07 58.9 37 75.7
Potri.003G130700 Populus trichocarpa HOM05D002625 ORTHO05D002977 3.5e-07 58.5 71 47.9
MSTRG.11968 Avicennia marina HOM05D002625 ORTHO05D002977 5.9e-07 57.8 71 49.3
CSS0008846 Camellia sinensis var. sinensis HOM05D002625 ORTHO05D002977 7.7e-07 57.4 29 89.7
CiPaw.11G132400 Carya illinoinensis HOM05D002625 ORTHO05D002977 7.7e-07 57.4 71 46.5
Hma1.2p1_1123F.1_g259390 Hydrangea macrophylla HOM05D002625 ORTHO05D002977 1.0e-06 57.0 71 47.9
Sabra03G0092900 Salix brachista HOM05D002625 ORTHO05D002977 1.3e-06 56.6 71 46.5
Duzib068G1381 Durio zibethinus HOM05D002625 ORTHO05D002977 1.7e-06 56.2 66 48.5
Manes.01G059200 Manihot esculenta HOM05D002625 ORTHO05D002977 2.3e-06 55.8 71 46.5
TWI81G0702 Tripterygium wilfordii HOM05D002625 ORTHO05D002977 2.3e-06 55.8 71 45.1
Migut.A00748 Erythranthe guttata HOM05D002625 ORTHO05D002977 2.9e-06 55.5 71 46.5
TWI60G0865 Tripterygium wilfordii HOM05D002625 ORTHO05D002977 3.8e-06 55.1 71 45.1
CiPaw.12G090800 Carya illinoinensis HOM05D002625 ORTHO05D002977 5.0e-06 54.7 35 71.4
Lj4g0007440 Lotus japonicus HOM05D002625 ORTHO05D002977 5.0e-06 54.7 66 50.0
Oeu000833.2 Olea europaea HOM05D002625 ORTHO05D002977 5.0e-06 54.7 76 42.1
Sabra01G0076100 Salix brachista HOM05D002625 ORTHO05D002977 5.0e-06 54.7 38 65.8
SGA_v2.0_scaffold96G28923 Striga asiatica HOM05D002625 ORTHO05D002977 5.0e-06 54.7 71 47.9
Dinv37617 Davidia involucrata HOM05D002625 ORTHO05D002977 6.6e-06 54.3 71 43.7
MD14G1109300 Malus domestica HOM05D002625 ORTHO05D002977 8.6e-06 53.9 71 43.7
Hund11450 Selenicereus undatus HOM05D002625 ORTHO05D002977 8.6e-06 53.9 71 45.1


User provided reference genes

Program Settings