Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041171 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 7.1e-26 120.2 68 100.0
CSS0020810 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 7.4e-23 110.2 68 94.1
CSS0041767 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 1.8e-21 105.5 68 88.2
CSS0035762 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 1.0e-19 99.8 67 88.1
CSS0001348 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 1.4e-18 95.9 67 85.1
Dinv12424 Davidia involucrata HOM05D002160 ORTHO05D002012 3.7e-14 81.3 66 77.3
Dinv17000 Davidia involucrata HOM05D002160 ORTHO05D002012 1.4e-13 79.3 66 75.8
Dinv42949 Davidia involucrata HOM05D002160 ORTHO05D002012 1.4e-13 79.3 66 75.8
Dinv43151 Davidia involucrata HOM05D002160 ORTHO05D002012 1.4e-13 79.3 66 75.8
Hma1.2p1_0418F.1_g149080 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 2.6e-12 75.1 67 73.1
Hma1.2p1_0035F.1_g022400 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 3.4e-12 74.7 67 68.7
Cc01_g12850 Coffea canephora HOM05D002160 ORTHO05D002012 7.7e-12 73.6 68 69.1
Hma1.2p1_0035F.1_g022410 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 7.7e-12 73.6 67 55.2
DCAR_005972 Daucus carota HOM05D002160 ORTHO05D002012 3.8e-11 71.2 67 70.1
ECA247G1660 Erigeron canadensis HOM05D002160 ORTHO05D002012 7.2e-10 67.0 66 65.2
DCAR_018908 Daucus carota HOM05D002160 ORTHO05D002012 9.4e-10 66.6 66 65.2
Lsat_1_v5_gn_9_23460 Lactuca sativa HOM05D002160 ORTHO05D002012 9.4e-10 66.6 66 63.6
Rhsim13G0082700 Rhododendron simsii HOM05D002160 ORTHO05D002012 1.2e-09 66.2 68 66.2
CAN.G394.56 Capsicum annuum HOM05D002160 ORTHO05D002012 1.6e-09 65.9 68 63.2
Hma1.2p1_0418F.1_g149100 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 7.9e-09 63.5 69 63.8
Atru.chr3.3902 Acer truncatum HOM05D002160 ORTHO05D002012 1.8e-08 62.4 70 72.9
HanXRQChr11g0350841 Helianthus annuus HOM05D002160 ORTHO05D002012 1.8e-08 62.4 66 62.1
CSS0049920 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D024696 3.9e-08 61.2 58 79.3
CAN.G405.1 Capsicum annuum HOM05D002160 ORTHO05D002012 5.1e-08 60.8 74 62.2
CSS0041307 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D024696 6.7e-08 60.5 58 77.6
AL6G11600 Arabidopsis lyrata HOM05D002160 ORTHO05D002012 8.8e-08 60.1 73 58.9
Carub.0006s0117 Capsella rubella HOM05D002160 ORTHO05D002012 8.8e-08 60.1 73 58.9
Manes.08G079000 Manihot esculenta HOM05D002160 ORTHO05D002012 8.8e-08 60.1 76 61.8
CSS0038374 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 1.5e-07 59.3 75 64.0
Peaxi162Scf00946g00028 Petunia axillaris HOM05D002160 ORTHO05D002012 2.0e-07 58.9 66 62.1
Sopen06g032540 Solanum pennellii HOM05D002160 ORTHO05D002012 2.0e-07 58.9 74 58.1
QL07p048278 Quercus lobata HOM05D002160 ORTHO05D002012 2.6e-07 58.5 68 61.8
Actinidia26465 Actinidia chinensis HOM05D002160 ORTHO05D002012 3.3e-07 58.2 75 62.7
AT5G02380 Arabidopsis thaliana HOM05D002160 ORTHO05D002012 4.4e-07 57.8 73 57.5
CARHR211040 Cardamine hirsuta HOM05D002160 ORTHO05D002012 4.4e-07 57.8 74 59.5
HanXRQChr08g0235781 Helianthus annuus HOM05D002160 ORTHO05D002012 4.4e-07 57.8 66 60.6
Potri.001G239650 Populus trichocarpa HOM05D002160 ORTHO05D002012 4.4e-07 57.8 70 65.7
CSS0046936 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D024696 5.7e-07 57.4 58 77.6
CiPaw.14G068500 Carya illinoinensis HOM05D002160 ORTHO05D002012 5.7e-07 57.4 75 49.3
Duzib093G1046 Durio zibethinus HOM05D002160 ORTHO05D002012 5.7e-07 57.4 75 61.3
QL07p048273 Quercus lobata HOM05D002160 ORTHO05D002012 5.7e-07 57.4 68 67.6
Duzib106G1044 Durio zibethinus HOM05D002160 ORTHO05D002012 7.4e-07 57.0 75 61.3
Gohir.D11G345700 Gossypium hirsutum HOM05D002160 ORTHO05D002012 7.4e-07 57.0 73 56.2
Gorai.002G257700 Gossypium raimondii HOM05D002160 ORTHO05D002012 7.4e-07 57.0 76 60.5
Nitab4.5_0002557g0020 Nicotiana tabacum HOM05D002160 ORTHO05D002012 7.4e-07 57.0 61 67.2
CSS0042900 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 1.3e-06 56.2 75 62.7
Nitab4.5_0000317g0020 Nicotiana tabacum HOM05D002160 ORTHO05D002012 1.3e-06 56.2 89 51.7
Prupe.6G255100 Prunus persica HOM05D002160 ORTHO05D002012 1.3e-06 56.2 73 58.9
CiPaw.09G192500 Carya illinoinensis HOM05D002160 ORTHO05D002012 1.7e-06 55.8 75 61.3
Gohir.A04G082400 Gossypium hirsutum HOM05D002160 ORTHO05D002012 1.7e-06 55.8 75 60.0
Gohir.D04G121400 Gossypium hirsutum HOM05D002160 ORTHO05D002012 1.7e-06 55.8 75 60.0
Gorai.007G376000 Gossypium raimondii HOM05D002160 ORTHO05D002012 1.7e-06 55.8 73 54.8
Solyc04g058150.3 Solanum lycopersicum HOM05D002160 ORTHO05D002012 1.7e-06 55.8 57 70.2
Sopen04g026050 Solanum pennellii HOM05D002160 ORTHO05D002012 1.7e-06 55.8 57 70.2
CiPaw.03G262000 Carya illinoinensis HOM05D002160 ORTHO05D002012 2.8e-06 55.1 70 47.1
Gorai.012G103800 Gossypium raimondii HOM05D002160 ORTHO05D002012 2.8e-06 55.1 75 60.0
Manes.02G133200 Manihot esculenta HOM05D002160 ORTHO05D002012 2.8e-06 55.1 60 71.7
Peaxi162Scf00774g00011 Petunia axillaris HOM05D002160 ORTHO05D002012 2.8e-06 55.1 61 63.9
Solyc06g076140.4 Solanum lycopersicum HOM05D002160 ORTHO05D002012 2.8e-06 55.1 46 80.4
PGSC0003DMG400030321 Solanum tuberosum HOM05D002160 ORTHO05D002012 2.8e-06 55.1 61 67.2
TAR633G1907 Trochodendron aralioides HOM05D002160 ORTHO05D002012 2.8e-06 55.1 70 60.0
Gohir.A01G222400 Gossypium hirsutum HOM05D002160 ORTHO05D002012 3.7e-06 54.7 75 57.3
PSO339G1859 Papaver somniferum HOM05D002160 ORTHO05D002012 3.7e-06 54.7 64 70.3
Rhsim04G0157100 Rhododendron simsii HOM05D002160 ORTHO05D002012 3.7e-06 54.7 71 60.6
vmacro03072 Vaccinium macrocarpon HOM05D002160 ORTHO05D002012 3.7e-06 54.7 47 61.7
AT3G09390 Arabidopsis thaliana HOM05D002160 ORTHO05D002012 4.8e-06 54.3 77 55.8
MBI14_g20107_MAGBIO Magnolia biondii HOM05D002160 ORTHO05D002012 4.8e-06 54.3 76 56.6
PSO151G0128 Papaver somniferum HOM05D002160 ORTHO05D002012 4.8e-06 54.3 64 67.2
Thecc.05G039800 Theobroma cacao HOM05D002160 ORTHO05D002012 4.8e-06 54.3 71 63.4
TAR369G0024 Trochodendron aralioides HOM05D002160 ORTHO05D002012 6.3e-06 53.9 76 60.5
Glyma.07G132000 Glycine max HOM05D002160 ORTHO05D002012 8.2e-06 53.5 76 56.6
PSO339G1421 Papaver somniferum HOM05D002160 ORTHO05D002012 8.2e-06 53.5 64 67.2


User provided reference genes

Program Settings