Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041169 Camellia sinensis var. sinensis HOM05D025174 ORTHO05D012910 1.7e-91 339.3 172 100.0
CSS0029848 Camellia sinensis var. sinensis HOM05D025174 ORTHO05D012910 1.4e-85 319.7 201 85.6
CSS0044635 Camellia sinensis var. sinensis HOM05D025174 ORTHO05D012910 3.3e-71 271.9 203 71.4
CSS0029354 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.2e-10 68.9 103 37.9
CSS0039165 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-09 67.4 125 35.2
CSS0038037 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.6e-09 65.9 109 34.9
Atru.chr11.757 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-08 63.2 108 33.3
Atru.chr2.2708 Acer truncatum HOM05D000003 ORTHO05D000022 3.0e-08 62.8 107 32.7
CSS0016144 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.0e-08 62.8 92 38.0
CSS0047834 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.0e-08 62.8 92 38.0
Atru.chr6.2848 Acer truncatum HOM05D000003 ORTHO05D000022 3.9e-08 62.4 142 30.3
CSS0009370 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.9e-08 62.4 109 33.9
Atru.chr1.1336 Acer truncatum HOM05D000003 ORTHO05D000022 5.2e-08 62.0 108 31.5
Prupe.6G118100 Prunus persica HOM05D000003 ORTHO05D000022 5.2e-08 62.0 111 35.1
Prupe.6G201000 Prunus persica HOM05D000003 ORTHO05D000022 5.2e-08 62.0 111 35.1
Atru.chr1.3365 Acer truncatum HOM05D000003 ORTHO05D000004 6.7e-08 61.6 108 32.4
CSS0032702 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 6.7e-08 61.6 86 37.2
Prupe.4G161900 Prunus persica HOM05D000003 ORTHO05D000022 6.7e-08 61.6 111 35.1
Atru.chr1.1302 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-07 60.8 134 29.1
Atru.chr10.81 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-07 60.8 136 28.7
LjContig00357g0004525 Lotus japonicus HOM05D000003 ORTHO05D000022 1.1e-07 60.8 109 31.2
Atru.chr6.1028 Acer truncatum HOM05D000003 ORTHO05D000004 1.5e-07 60.5 124 29.8
vmacro01820 Vaccinium macrocarpon HOM05D001647 ORTHO05D001191 1.5e-07 60.5 107 30.8
Atru.chr1.776 Acer truncatum HOM05D000003 ORTHO05D000004 2.0e-07 60.1 107 30.8
Aqoxy12s031 Aquilegia oxysepala HOM05D000003 ORTHO05D012910 2.6e-07 59.7 108 33.3
CSS0041590 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.4e-07 58.9 86 36.0
RcHm_v2.0_Chr1g0382551 Rosa chinensis HOM05D000003 ORTHO05D000004 4.4e-07 58.9 136 35.3
Atru.chr13.1154 Acer truncatum HOM05D000003 ORTHO05D000004 5.7e-07 58.5 73 39.7
Atru.chr2.1761 Acer truncatum HOM05D000003 ORTHO05D000004 7.4e-07 58.2 108 33.3
Atru.chr7.713 Acer truncatum HOM05D000003 ORTHO05D000004 7.4e-07 58.2 102 32.4
Atru.chr8.1058 Acer truncatum HOM05D000003 ORTHO05D000004 9.7e-07 57.8 108 31.5
Atru.chr5.2238 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-06 57.4 107 31.8
Atru.chr6.1145 Acer truncatum HOM05D000003 ORTHO05D012910 1.3e-06 57.4 99 33.3
Atru.chr12.2484 Acer truncatum HOM05D000003 ORTHO05D000022 1.7e-06 57.0 72 40.3
Atru.chr2.1419 Acer truncatum HOM05D000003 ORTHO05D000022 1.7e-06 57.0 107 31.8
Atru.chr10.890 Acer truncatum HOM05D000003 ORTHO05D000022 2.2e-06 56.6 107 31.8
Atru.chr2.971 Acer truncatum HOM05D000003 ORTHO05D000022 2.2e-06 56.6 99 35.4
Atru.chr4.661 Acer truncatum HOM05D000003 ORTHO05D000022 2.8e-06 56.2 94 38.3
Atru.chr1.2620 Acer truncatum HOM05D000003 ORTHO05D000004 3.7e-06 55.8 73 42.5
Atru.chr13.2390 Acer truncatum HOM05D000003 ORTHO05D000004 3.7e-06 55.8 137 27.7
CSS0038564 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.7e-06 55.8 37 59.5
RcHm_v2.0_Chr1g0351011 Rosa chinensis HOM05D000003 ORTHO05D000004 3.7e-06 55.8 110 36.4
Atru.chr2.2395 Acer truncatum HOM05D000003 ORTHO05D000022 4.8e-06 55.5 110 31.8
Lj4g0003656 Lotus japonicus HOM05D000003 ORTHO05D000007 4.8e-06 55.5 119 29.4
CSS0014297 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 6.3e-06 55.1 106 31.1
RcHm_v2.0_Chr6g0291741 Rosa chinensis HOM05D000003 ORTHO05D000004 6.3e-06 55.1 112 32.1
Atru.chr3.3019 Acer truncatum HOM05D000003 ORTHO05D000022 8.2e-06 54.7 108 29.6
Manes.06G020101 Manihot esculenta HOM05D000003 ORTHO05D000004 8.2e-06 54.7 112 30.4


User provided reference genes

Program Settings