Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041120 Camellia sinensis var. sinensis HOM05D003833 ORTHO05D004209 1.7e-146 522.7 278 100.0
Actinidia39173 Actinidia chinensis HOM05D003833 ORTHO05D004209 9.5e-129 463.8 277 87.4
Dinv08489 Davidia involucrata HOM05D003833 ORTHO05D004209 1.6e-128 463.0 276 87.0
Lj2A394G34 Lonicera japonica HOM05D003833 ORTHO05D004209 7.5e-126 454.1 275 86.2
Migut.K00123 Erythranthe guttata HOM05D003833 ORTHO05D004209 9.8e-126 453.8 276 84.8
Lj1A1105T22 Lonicera japonica HOM05D003833 ORTHO05D004209 2.9e-125 452.2 276 85.1
MSTRG.15651 Avicennia marina HOM05D003833 ORTHO05D004209 2.7e-123 445.7 272 85.3
MSTRG.10798 Avicennia marina HOM05D003833 ORTHO05D004209 7.8e-123 444.1 276 84.8
PGSC0003DMG400010441 Solanum tuberosum HOM05D003833 ORTHO05D004209 2.3e-122 442.6 271 84.9
DCAR_020545 Daucus carota HOM05D003833 ORTHO05D004209 1.9e-121 439.5 270 84.1
Lsat_1_v5_gn_4_129320 Lactuca sativa HOM05D003833 ORTHO05D004209 1.9e-121 439.5 274 83.2
Oeu029492.1 Olea europaea HOM05D003833 ORTHO05D004209 4.3e-121 438.3 278 83.8
Solyc02g068640.3 Solanum lycopersicum HOM05D003833 ORTHO05D004209 9.5e-121 437.2 274 82.8
Sopen02g017810 Solanum pennellii HOM05D003833 ORTHO05D004209 9.5e-121 437.2 274 82.8
SGA_v2.0_scaffold94G28522 Striga asiatica HOM05D003833 ORTHO05D004209 1.2e-120 436.8 271 83.0
Manes.09G008001 Manihot esculenta HOM05D003833 ORTHO05D004209 2.8e-120 435.6 272 80.9
Dinv34388 Davidia involucrata HOM05D003833 ORTHO05D004209 5.2e-119 431.4 289 79.2
FAN05G1327 Fragaria x ananassa HOM05D003833 ORTHO05D004209 5.2e-119 431.4 272 80.9
FAN05G4135 Fragaria x ananassa HOM05D003833 ORTHO05D004209 5.2e-119 431.4 272 80.9
Peaxi162Scf00149g00116 Petunia axillaris HOM05D003833 ORTHO05D004209 1.2e-118 430.3 283 80.9
FvH4_6g25150 Fragaria vesca HOM05D003833 ORTHO05D004209 1.5e-118 429.9 272 80.9
HanXRQChr09g0266491 Helianthus annuus HOM05D003833 ORTHO05D004209 1.5e-118 429.9 274 80.3
Aqoxy2G03781 Aquilegia oxysepala HOM05D003833 ORTHO05D004209 2.6e-118 429.1 272 81.6
CANSAT64G1401 Cannabis sativa HOM05D003833 ORTHO05D004209 3.4e-118 428.7 271 80.8
Aqoxy2G00325 Aquilegia oxysepala HOM05D003833 ORTHO05D004209 4.4e-118 428.3 272 81.6
ECA232G1919 Erigeron canadensis HOM05D003833 ORTHO05D004209 4.4e-118 428.3 273 82.4
Prupe.7G045500 Prunus persica HOM05D003833 ORTHO05D004209 4.4e-118 428.3 270 80.0
Haze_19732 Corylus avellana HOM05D003833 ORTHO05D004209 9.9e-118 427.2 272 79.4
vmacro07822 Vaccinium macrocarpon HOM05D003833 ORTHO05D004209 9.9e-118 427.2 373 67.3
FAN02G2058 Fragaria x ananassa HOM05D003833 ORTHO05D004209 1.3e-117 426.8 272 80.1
Cfa016709 Carpinus fangiana HOM05D003833 ORTHO05D004209 2.2e-117 426.0 272 78.7
MD12G1094200 Malus domestica HOM05D003833 ORTHO05D004209 3.7e-117 425.2 270 80.0
RcHm_v2.0_Chr1g0334171 Rosa chinensis HOM05D003833 ORTHO05D004209 3.7e-117 425.2 272 80.1
AUR62030362 Chenopodium quinoa HOM05D003833 ORTHO05D004209 8.3e-117 424.1 271 81.9
Lj1g0026826 Lotus japonicus HOM05D003833 ORTHO05D004209 8.3e-117 424.1 271 80.4
MD14G1084400 Malus domestica HOM05D003833 ORTHO05D004209 1.1e-116 423.7 270 79.3
TAR623G1635 Trochodendron aralioides HOM05D003833 ORTHO05D004209 1.4e-116 423.3 271 81.2
ClCG04G004210 Citrullus lanatus HOM05D003833 ORTHO05D004209 2.4e-116 422.5 275 80.0
Sed0017232 Sechium edule HOM05D003833 ORTHO05D004209 2.4e-116 422.5 275 80.4
Hund24632 Selenicereus undatus HOM05D003833 ORTHO05D004209 2.4e-116 422.5 273 79.9
Atru.chr1.1452 Acer truncatum HOM05D003833 ORTHO05D004209 5.4e-116 421.4 269 82.2
Cpa.g.sc49.96 Carica papaya HOM05D003833 ORTHO05D004209 7.1e-116 421.0 272 79.0
Ciclev10005607m.g Citrus clementina HOM05D003833 ORTHO05D004209 7.1e-116 421.0 270 81.5
PGR042G2932 Punica granatum HOM05D003833 ORTHO05D004209 7.1e-116 421.0 272 81.6
EL10Ac3g07192 Beta vulgaris HOM05D003833 ORTHO05D004209 9.2e-116 420.6 272 81.2
FAN14G1808 Fragaria x ananassa HOM05D003833 ORTHO05D004209 1.2e-115 420.2 282 78.0
TWI53G1459 Tripterygium wilfordii HOM05D003833 ORTHO05D004209 1.0e-114 417.2 272 79.8
Atru.chr1.1464 Acer truncatum HOM05D003833 ORTHO05D004209 1.3e-114 416.8 269 81.0
Thecc.05G140900 Theobroma cacao HOM05D003833 ORTHO05D004209 1.7e-114 416.4 271 80.1
MELO3C019039.2 Cucumis melo HOM05D003833 ORTHO05D004209 3.0e-114 415.6 275 78.2
CsaV3_4G027860 Cucumis sativus L. HOM05D003833 ORTHO05D004209 3.0e-114 415.6 275 78.2
QL07p007726 Quercus lobata HOM05D003833 ORTHO05D004209 3.0e-114 415.6 270 77.8
Potri.006G042600 Populus trichocarpa HOM05D003833 ORTHO05D004209 3.9e-114 415.2 270 79.3
Duzib093G1609 Durio zibethinus HOM05D003833 ORTHO05D004209 5.1e-114 414.8 270 80.4
Sabra06G0028900 Salix brachista HOM05D003833 ORTHO05D004209 5.1e-114 414.8 270 78.9
GSVIVG01033588001 Vitis vinifera HOM05D003833 ORTHO05D004209 5.1e-114 414.8 276 78.6
Ah.04g151120 Amaranthus hybridus HOM05D003833 ORTHO05D004209 6.6e-114 414.5 273 79.1
Sc13g0001320 Simmondsia chinensis HOM05D003833 ORTHO05D004209 6.6e-114 414.5 270 80.7
PGR142G2709 Punica granatum HOM05D003833 ORTHO05D004209 1.1e-113 413.7 272 79.8
Sed0027268 Sechium edule HOM05D003833 ORTHO05D004209 1.1e-113 413.7 275 78.2
Ca_08401_v3 Cicer arietinum L. HOM05D003833 ORTHO05D004209 3.3e-113 412.1 271 78.6
COL.COLO4_33945 Corchorus olitorius HOM05D003833 ORTHO05D004209 3.3e-113 412.1 273 79.1
Lalb_Chr14g0365931 Lupinus albus HOM05D003833 ORTHO05D004209 3.3e-113 412.1 271 78.6
Sc13g0001340 Simmondsia chinensis HOM05D003833 ORTHO05D004209 3.3e-113 412.1 272 80.9
arahy.Tifrunner.gnm1.ann1.C9KHWR Arachis hypogaea HOM05D003833 ORTHO05D004209 7.3e-113 411.0 272 78.3
Gohir.A07G024700 Gossypium hirsutum HOM05D003833 ORTHO05D004209 1.2e-112 410.2 273 78.8
TPR.G9312 Trifolium pratense HOM05D003833 ORTHO05D004209 2.8e-112 409.1 272 77.6
Nitab4.5_0003379g0050 Nicotiana tabacum HOM05D003833 ORTHO05D004209 6.2e-112 407.9 341 67.7
Psat3g078000 Pisum sativum HOM05D003833 ORTHO05D004209 6.2e-112 407.9 271 77.5
CiPaw.09G044700 Carya illinoinensis HOM05D003833 ORTHO05D004209 8.1e-112 407.5 270 77.8
Phvul.001G124300 Phaseolus vulgaris HOM05D003833 ORTHO05D004209 1.1e-111 407.1 272 78.3
Gorai.001G029600 Gossypium raimondii HOM05D003833 ORTHO05D004209 1.8e-111 406.4 273 77.7
PSO210G1377 Papaver somniferum HOM05D003833 ORTHO05D004209 1.8e-111 406.4 271 77.9
Glyma.19G131500 Glycine max HOM05D003833 ORTHO05D004209 2.4e-111 406.0 272 77.6
Medtr7g090160 Medicago truncatula HOM05D003833 ORTHO05D004209 3.1e-111 405.6 272 76.8
Gohir.D07G028300 Gossypium hirsutum HOM05D003833 ORTHO05D004209 4.0e-111 405.2 273 77.3
VMungo1383G2371 Vigna mungo HOM05D003833 ORTHO05D004209 4.0e-111 405.2 272 77.6
Glyma.03G129100 Glycine max HOM05D003833 ORTHO05D004209 1.2e-110 403.7 272 77.2
PSO832G0079 Papaver somniferum HOM05D003833 ORTHO05D004209 1.2e-110 403.7 271 77.5
AUR62040845 Chenopodium quinoa HOM05D003833 ORTHO05D004209 1.5e-110 403.3 271 79.3
PSO782G0909 Papaver somniferum HOM05D003833 ORTHO05D004209 1.5e-110 403.3 272 76.8
Nitab4.5_0006282g0020 Nicotiana tabacum HOM05D003833 ORTHO05D004209 8.4e-109 397.5 322 69.9
arahy.Tifrunner.gnm1.ann1.LP5CTB Arachis hypogaea HOM05D003833 ORTHO05D004209 1.1e-108 397.1 302 71.2
THA.LOC104816595 Tarenaya hassleriana HOM05D003833 ORTHO05D004209 1.9e-108 396.4 275 74.9
Carub.0006s1298 Capsella rubella HOM05D003833 ORTHO05D004209 2.7e-107 392.5 273 75.1
Ah.13g077020 Amaranthus hybridus HOM05D003833 ORTHO05D004209 7.8e-107 391.0 286 72.4
Thhalv10014353m.g Eutrema salsugineum HOM05D003833 ORTHO05D004209 1.3e-106 390.2 273 75.1
AT5G14800 Arabidopsis thaliana HOM05D003833 ORTHO05D004209 5.1e-106 388.3 273 74.4
AL6G25600 Arabidopsis lyrata HOM05D003833 ORTHO05D004209 6.6e-106 387.9 273 74.0
Sp6g29240 Schrenkiella parvula HOM05D003833 ORTHO05D004209 6.6e-106 387.9 275 74.2
A10p23880 Brassica napus HOM05D003833 ORTHO05D004209 8.7e-106 387.5 271 74.5
BcaB08g36945 Brassica carinata HOM05D003833 ORTHO05D004209 1.1e-105 387.1 271 74.5
BcaC04g19007 Brassica carinata HOM05D003833 ORTHO05D004209 1.5e-105 386.7 271 74.2
BolC9t59073H Brassica oleracea HOM05D003833 ORTHO05D004209 1.5e-105 386.7 271 74.2
C09p62360 Brassica napus HOM05D003833 ORTHO05D004209 3.3e-105 385.6 271 73.8
RhsimUnG0217200 Rhododendron simsii HOM05D003833 ORTHO05D004209 5.6e-105 384.8 492 51.8
BraA10t44452Z Brassica rapa HOM05D003833 ORTHO05D004209 7.3e-105 384.4 271 74.2
CARHR198510 Cardamine hirsuta HOM05D003833 ORTHO05D004209 1.2e-104 383.6 273 72.9
Rhsim03G0034800 Rhododendron simsii HOM05D003833 ORTHO05D004209 1.6e-104 383.3 492 51.6
Nn7g36480 Nelumbo nucifera HOM05D003833 ORTHO05D004209 3.6e-104 382.1 270 74.4
A03p06820 Brassica napus HOM05D003833 ORTHO05D004209 6.2e-104 381.3 270 73.3
Cc06_g18620 Coffea canephora HOM05D003833 ORTHO05D004209 1.1e-103 380.6 253 78.3
SHI05043 Sapria himalayana HOM05D003833 ORTHO05D004209 5.3e-103 378.3 265 73.6
BcaB01g05096 Brassica carinata HOM05D003833 ORTHO05D004209 1.2e-102 377.1 270 73.0
C03p07820 Brassica napus HOM05D003833 ORTHO05D004209 1.2e-102 377.1 270 73.0
BolC3t13281H Brassica oleracea HOM05D003833 ORTHO05D004209 1.2e-102 377.1 270 73.0
BraA03t10007Z Brassica rapa HOM05D003833 ORTHO05D004209 1.2e-102 377.1 274 72.6
unitig_26.g8850 Utricularia gibba HOM05D003833 ORTHO05D004209 4.9e-101 371.7 247 79.4
Aa31LG11G14650 Aethionema arabicum HOM05D003833 ORTHO05D004209 6.4e-101 371.3 317 65.0
MBI13_g29520_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 6.4e-101 371.3 268 72.0
CDE09G0749 Ceratophyllum demersum HOM05D003833 ORTHO05D004209 7.1e-100 367.9 271 70.5
CDE02G3693 Ceratophyllum demersum HOM05D003833 ORTHO05D004209 3.5e-99 365.5 271 70.1
HPP92_001015 Vanilla planifolia HOM05D003833 ORTHO05D004209 1.7e-98 363.2 265 69.1
ATR0721G010 Amborella trichopoda HOM05D003833 ORTHO05D004209 8.7e-98 360.9 267 69.7
Os01g0948400 Oryza sativa ssp. japonica HOM05D003833 ORTHO05D004209 6.2e-96 354.8 283 65.7
Prupe.7G045400 Prunus persica HOM05D003833 ORTHO05D004209 4.5e-94 348.6 272 65.1
SEGI_35199 Sequoiadendron giganteum HOM05D003833 ORTHO05D004209 3.5e-91 339.0 263 66.2
MD12G1091800 Malus domestica HOM05D003833 ORTHO05D004209 1.1e-89 334.0 272 63.6
Eucgr.K01625 Eucalyptus grandis HOM05D003833 ORTHO05D004209 1.4e-87 327.0 214 81.3
Zm00001eb141220 Zea mays HOM05D003833 ORTHO05D004209 1.9e-84 316.6 274 61.3
AagrBONN_evm.TU.Sc2ySwM_368.156 Anthoceros agrestis HOM05D003833 ORTHO05D004209 1.0e-82 310.8 271 59.4
AagrBONN_evm.TU.Sc2ySwM_368.1806 Anthoceros agrestis HOM05D003833 ORTHO05D004209 1.8e-82 310.1 263 60.1
SMO337G0103 Selaginella moellendorffii HOM05D003833 ORTHO05D004209 1.8e-82 310.1 263 60.8
BolC3t20513H Brassica oleracea HOM05D003833 ORTHO05D004209 6.2e-80 301.6 250 64.8
Mapoly0029s0092 Marchantia polymorpha HOM05D003833 ORTHO05D004209 1.4e-79 300.4 266 59.4
BolC4t23181H Brassica oleracea HOM05D003833 ORTHO05D004209 1.7e-77 293.5 251 64.1
C03p82400 Brassica napus HOM05D003833 ORTHO05D004209 1.6e-75 287.0 277 58.5
C03p82420 Brassica napus HOM05D003833 ORTHO05D004209 2.1e-75 286.6 278 57.9
BcaC02g10661 Brassica carinata HOM05D003833 ORTHO05D004209 4.6e-75 285.4 254 63.0
BolC4t24169H Brassica oleracea HOM05D003833 ORTHO05D004209 6.0e-75 285.0 255 63.1
Pp3c10_15650 Physcomitrium patens HOM05D003833 ORTHO05D004209 5.1e-74 282.0 262 54.2
BcaC06g33558 Brassica carinata HOM05D003833 ORTHO05D004209 1.1e-73 280.8 277 58.1
BcaC02g11392 Brassica carinata HOM05D003833 ORTHO05D004209 3.3e-73 279.3 278 57.9
C04p16080 Brassica napus HOM05D003833 ORTHO05D004209 4.3e-73 278.9 278 57.9
Dinv03868 Davidia involucrata HOM05D003833 ORTHO05D004209 7.4e-73 278.1 162 87.0
CBR_g16006 Chara braunii HOM05D003833 ORTHO05D004209 1.1e-71 274.2 276 52.2
Cre03.g154550 Chlamydomonas reinhardtii HOM05D003833 ORTHO05D004209 7.2e-68 261.5 269 51.7
Duzib056G0002 Durio zibethinus HOM05D003833 ORTHO05D004209 1.2e-67 260.8 255 61.2
Rhsim13G0081800 Rhododendron simsii HOM05D003833 ORTHO05D004209 1.2e-67 260.8 275 57.1
BolC6t37672H Brassica oleracea HOM05D003833 ORTHO05D004209 8.8e-66 254.6 222 63.5
FAN10G2875 Fragaria x ananassa HOM05D005759 ORTHO05D007172 9.7e-65 251.1 281 55.9
C06p25140 Brassica napus HOM05D003833 ORTHO05D004209 9.1e-63 244.6 277 53.4
C04p26360 Brassica napus HOM05D003833 ORTHO05D004209 1.5e-62 243.8 252 56.0
RcHm_v2.0_Chr2g0125021 Rosa chinensis HOM05D003833 ORTHO05D004209 7.2e-60 235.0 140 83.6
MCO05G631 Micromonas commoda HOM05D003833 ORTHO05D004209 2.1e-59 233.4 264 48.9
BolC3t20511H Brassica oleracea HOM05D003833 ORTHO05D004209 5.0e-53 212.2 131 82.4
BcaC02g10122 Brassica carinata HOM05D003833 ORTHO05D004209 8.5e-53 211.5 247 51.0
BcaC08g44899 Brassica carinata HOM05D003833 ORTHO05D004209 5.5e-52 208.8 267 48.7
Eucgr.K01616 Eucalyptus grandis HOM05D003833 ORTHO05D004209 2.2e-48 196.8 135 78.5
SEGI_40635 Sequoiadendron giganteum HOM05D003833 ORTHO05D004209 1.3e-45 187.6 131 74.8
MD12G1094100 Malus domestica HOM05D003833 ORTHO05D004209 5.5e-44 182.2 138 67.4
FAN06G3481 Fragaria x ananassa HOM05D003833 ORTHO05D004209 7.2e-44 181.8 164 64.0
MBI03_g45406_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 8.0e-43 178.3 147 64.6
PRCOL_00005946 Prasinoderma coloniale HOM05D003833 ORTHO05D004209 2.8e-40 169.9 228 46.1
MCO04G012 Micromonas commoda HOM05D003833 ORTHO05D004209 9.1e-39 164.9 414 32.4
TAR623G0480 Trochodendron aralioides HOM05D003833 ORTHO05D004209 1.6e-38 164.1 96 86.5
MBI03_g17131_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 1.3e-37 161.0 131 64.9
MBI09_g02151_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 1.9e-36 157.1 121 69.4
Nn1g08168 Nelumbo nucifera HOM05D003833 ORTHO05D004209 4.8e-32 142.5 124 60.5
Haze_26946 Corylus avellana HOM05D003833 ORTHO05D004209 1.1e-28 131.3 257 33.1
Haze_27356 Corylus avellana HOM05D003833 ORTHO05D004209 2.6e-25 120.2 292 29.1
Medtr1046s0010 Medicago truncatula HOM05D003833 ORTHO05D004209 3.4e-25 119.8 262 31.3
RcHm_v2.0_Chr2g0125031 Rosa chinensis HOM05D003833 ORTHO05D004209 1.3e-24 117.9 139 51.8
FvH4_7g06311 Fragaria vesca HOM05D003833 ORTHO05D004209 5.4e-23 112.5 73 82.2
Aqoxy3G03819 Aquilegia oxysepala HOM05D003833 ORTHO05D004209 3.9e-21 106.3 150 44.7
BcaNung06051 Brassica carinata HOM05D003833 ORTHO05D004209 1.5e-20 104.4 112 51.8
Oeu050503.1 Olea europaea HOM05D003833 ORTHO05D004209 1.5e-17 94.4 71 71.8
BcaC02g08088 Brassica carinata HOM05D003833 ORTHO05D004209 5.8e-17 92.4 52 88.5
C04p17110 Brassica napus HOM05D003833 ORTHO05D004209 7.5e-17 92.0 52 86.5
BolC4t23262H Brassica oleracea HOM05D003833 ORTHO05D004209 7.5e-17 92.0 52 86.5
CBR_g37250 Chara braunii HOM05D003833 ORTHO05D004209 1.3e-16 91.3 69 62.3
BolC8t47752H Brassica oleracea HOM05D003833 ORTHO05D004209 1.7e-16 90.9 52 86.5
BcaC02g11310 Brassica carinata HOM05D003833 ORTHO05D004209 3.7e-16 89.7 52 86.5
FvH4_7g06312 Fragaria vesca HOM05D003833 ORTHO05D004209 3.7e-16 89.7 53 81.1
MBI10_g20272_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 4.9e-16 89.4 59 76.3
MD12G1091600 Malus domestica HOM05D003833 ORTHO05D004209 3.2e-15 86.7 63 66.7
C08p09060 Brassica napus HOM05D003833 ORTHO05D004209 4.1e-15 86.3 50 84.0
SGA_v2.0_scaffold44G16671 Striga asiatica HOM05D003833 ORTHO05D004209 1.6e-14 84.3 71 63.4
BolC4t24812H Brassica oleracea HOM05D003833 ORTHO05D004209 2.3e-13 80.5 78 53.8
Gohir.D06G163101 Gossypium hirsutum HOM05D002585 ORTHO05D002917 4.7e-11 72.8 64 59.4
Gorai.011G171800 Gossypium raimondii HOM05D002585 ORTHO05D002917 4.7e-11 72.8 64 59.4
CAN.G102.1 Capsicum annuum HOM05D000541 ORTHO05D000137 2.3e-10 70.5 55 65.5
Gohir.D13G165733 Gossypium hirsutum HOM05D002585 ORTHO05D002917 5.2e-10 69.3 64 56.2
Gorai.008G052500 Gossypium raimondii HOM05D002585 ORTHO05D002917 5.2e-10 69.3 61 60.7
SalBow6G3161 Salvia bowleyana HOM05D021775 ORTHO05D004209 2.4e-07 60.5 40 75.0


User provided reference genes

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