Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013160 Camellia sinensis var. sinensis HOM05D009245 ORTHO05D011414 2.1e-42 175.3 85 100.0
CSS0041114 Camellia sinensis var. sinensis HOM05D009245 ORTHO05D011414 2.1e-42 175.3 85 100.0
Dinv10969 Davidia involucrata HOM05D009245 ORTHO05D011414 3.3e-32 141.4 85 77.6
CSS0003449 Camellia sinensis var. sinensis HOM05D009245 ORTHO05D011414 8.4e-28 126.7 85 75.3
GSVIVG01010444001 Vitis vinifera HOM05D009245 ORTHO05D011414 5.1e-25 117.5 84 67.9
Actinidia20700 Actinidia chinensis HOM05D009245 ORTHO05D011414 7.4e-24 113.6 79 68.4
CiPaw.06G101300 Carya illinoinensis HOM05D009245 ORTHO05D011414 1.6e-23 112.5 85 67.1
CiPaw.05G111800 Carya illinoinensis HOM05D009245 ORTHO05D011414 4.8e-23 110.9 85 67.1
Manes.12G012951 Manihot esculenta HOM05D009245 ORTHO05D011414 2.6e-21 105.1 85 60.0
Atru.chr11.2306 Acer truncatum HOM05D009245 ORTHO05D011414 1.6e-18 95.9 87 60.9
Glyma.11G249400 Glycine max HOM05D009245 ORTHO05D011414 2.1e-18 95.5 85 57.6
Glyma.08G103500 Glycine max HOM05D009245 ORTHO05D011414 4.6e-18 94.4 85 54.1
Cc11_g16810 Coffea canephora HOM05D009245 ORTHO05D011414 7.9e-18 93.6 86 58.1
Manes.13G018350 Manihot esculenta HOM05D009245 ORTHO05D011414 1.0e-17 93.2 85 54.1
arahy.Tifrunner.gnm1.ann1.6N96FM Arachis hypogaea HOM05D009245 ORTHO05D011414 1.8e-17 92.4 85 52.9
Thecc.02G212200 Theobroma cacao HOM05D009245 ORTHO05D011414 3.9e-17 91.3 85 54.1
Glyma.18G008000 Glycine max HOM05D009245 ORTHO05D011414 6.7e-17 90.5 85 56.5
Potri.013G104350 Populus trichocarpa HOM05D009245 ORTHO05D011414 1.5e-16 89.4 85 56.5
Migut.K00714 Erythranthe guttata HOM05D009245 ORTHO05D011414 5.7e-16 87.4 85 51.8
Gohir.A01G155200 Gossypium hirsutum HOM05D009245 ORTHO05D011414 7.4e-16 87.0 85 55.3
Phvul.001G260700 Phaseolus vulgaris HOM05D009245 ORTHO05D011414 9.7e-16 86.7 94 53.2
ClCG08G010130 Citrullus lanatus HOM05D009245 ORTHO05D011414 2.2e-15 85.5 85 55.3
Gohir.D01G154750 Gossypium hirsutum HOM05D009245 ORTHO05D011414 2.8e-15 85.1 85 54.1
Prupe.1G228500 Prunus persica HOM05D009245 ORTHO05D011414 1.8e-14 82.4 82 53.7
Lalb_Chr11g0075731 Lupinus albus HOM05D009245 ORTHO05D011414 5.3e-14 80.9 85 48.2
Lj4g0004409 Lotus japonicus HOM05D009245 ORTHO05D011414 6.9e-14 80.5 85 49.4
CsaV3_6G032310 Cucumis sativus L. HOM05D009245 ORTHO05D011414 1.2e-13 79.7 85 54.1
TAR629G3142 Trochodendron aralioides HOM05D009245 ORTHO05D011414 2.6e-13 78.6 81 48.1
EL10Ac6g13482 Beta vulgaris HOM05D009245 ORTHO05D011414 5.9e-13 77.4 85 51.8
Phvul.002G174500 Phaseolus vulgaris HOM05D009245 ORTHO05D011414 2.9e-12 75.1 58 58.6
Psat5g094920 Pisum sativum HOM05D000667 ORTHO05D003843 1.9e-11 72.4 73 53.4
Potri.008G175950 Populus trichocarpa HOM05D009245 ORTHO05D011414 9.4e-11 70.1 85 49.4
Lj3A1066T76 Lonicera japonica HOM05D000667 ORTHO05D003843 1.2e-10 69.7 72 55.6
CAN.G550.3 Capsicum annuum HOM05D009245 ORTHO05D011414 6.1e-10 67.4 83 42.2
TPR.G17065 Trifolium pratense HOM05D009245 ORTHO05D011414 4.1e-06 54.7 44 54.5
ECA233G3111 Erigeron canadensis HOM05D000667 ORTHO05D003843 9.1e-06 53.5 39 64.1


User provided reference genes

Program Settings