Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041060 Camellia sinensis var. sinensis HOM05D002414 ORTHO05D002531 1.6e-106 389.4 196 100.0
Actinidia02921 Actinidia chinensis HOM05D002414 ORTHO05D002531 4.0e-49 198.7 219 56.2
Dinv26046 Davidia involucrata HOM05D002414 ORTHO05D002531 4.0e-41 172.2 220 50.9
Hma1.2p1_0026F.1_g016280 Hydrangea macrophylla HOM05D002414 ORTHO05D002531 3.1e-33 146.0 229 43.7
CiPaw.01G291400 Carya illinoinensis HOM05D002414 ORTHO05D002531 6.9e-33 144.8 216 46.8
Rhsim03G0133800 Rhododendron simsii HOM05D002414 ORTHO05D002531 2.6e-32 142.9 198 49.0
CiPaw.02G186500 Carya illinoinensis HOM05D002414 ORTHO05D002531 4.5e-32 142.1 219 42.9
GSVIVG01016481001 Vitis vinifera HOM05D002414 ORTHO05D002531 7.9e-29 131.3 193 45.6
CAN.G608.2 Capsicum annuum HOM05D002414 ORTHO05D002531 1.5e-27 127.1 229 42.4
Peaxi162Scf00658g00422 Petunia axillaris HOM05D002414 ORTHO05D002531 1.9e-27 126.7 181 46.4
QL08p061332 Quercus lobata HOM05D002414 ORTHO05D002531 2.5e-27 126.3 234 40.6
QL08p061313 Quercus lobata HOM05D002414 ORTHO05D002531 2.1e-26 123.2 189 43.9
Lj1C943T2 Lonicera japonica HOM05D002414 ORTHO05D002531 2.8e-26 122.9 204 44.6
Nitab4.5_0004074g0010 Nicotiana tabacum HOM05D002414 ORTHO05D002531 2.8e-26 122.9 155 49.0
Nitab4.5_0005829g0030 Nicotiana tabacum HOM05D002414 ORTHO05D002531 2.8e-26 122.9 154 49.4
Oeu039015.1 Olea europaea HOM05D002414 ORTHO05D002531 3.7e-26 122.5 201 43.3
Cc02_g07420 Coffea canephora HOM05D002414 ORTHO05D002531 1.1e-25 120.9 220 38.6
Haze_17118 Corylus avellana HOM05D002414 ORTHO05D002531 1.8e-25 120.2 192 42.2
QL08p061292 Quercus lobata HOM05D002414 ORTHO05D002531 3.1e-25 119.4 189 43.4
Oeu017562.1 Olea europaea HOM05D002414 ORTHO05D002531 4.0e-25 119.0 198 41.9
Atru.chr12.362 Acer truncatum HOM05D002414 ORTHO05D002531 9.0e-25 117.9 173 46.2
Atru.chr12.379 Acer truncatum HOM05D002414 ORTHO05D002531 9.0e-25 117.9 173 46.2
Manes.10G026300 Manihot esculenta HOM05D002414 ORTHO05D002531 9.0e-25 117.9 197 41.1
Hma1.2p1_0039F.1_g024510 Hydrangea macrophylla HOM05D002414 ORTHO05D002531 1.2e-24 117.5 195 47.2
Cfa001425 Carpinus fangiana HOM05D002414 ORTHO05D002531 3.4e-24 115.9 226 39.8
Thecc.10G039300 Theobroma cacao HOM05D002414 ORTHO05D002531 4.5e-24 115.5 190 42.6
Duzib106G1475 Durio zibethinus HOM05D002414 ORTHO05D002531 7.6e-24 114.8 214 42.1
SalBow5G5569 Salvia bowleyana HOM05D002414 ORTHO05D002531 7.6e-24 114.8 158 46.8
Sopen06g017790 Solanum pennellii HOM05D002414 ORTHO05D002531 1.0e-23 114.4 174 45.4
Sabra10G0153800 Salix brachista HOM05D002414 ORTHO05D002531 1.3e-23 114.0 215 39.1
Dinv16252 Davidia involucrata HOM05D002414 ORTHO05D002531 3.8e-23 112.5 135 48.9
AUR62012137 Chenopodium quinoa HOM05D002414 ORTHO05D002531 4.9e-23 112.1 195 40.5
Migut.F00748 Erythranthe guttata HOM05D002414 ORTHO05D002531 8.4e-23 111.3 223 39.0
Gorai.011G268300 Gossypium raimondii HOM05D002414 ORTHO05D002531 8.4e-23 111.3 222 37.4
Eucgr.G02961 Eucalyptus grandis HOM05D002414 ORTHO05D002531 1.1e-22 110.9 175 45.1
SGA_v2.0_scaffold2G01047 Striga asiatica HOM05D002414 ORTHO05D002531 2.5e-22 109.8 205 39.0
MSTRG.27366 Avicennia marina HOM05D002414 ORTHO05D002531 3.2e-22 109.4 207 39.1
Gohir.D10G234700 Gossypium hirsutum HOM05D002414 ORTHO05D002531 3.2e-22 109.4 222 37.4
Gohir.A10G222401 Gossypium hirsutum HOM05D002414 ORTHO05D002531 4.2e-22 109.0 222 38.3
COL.COLO4_25492 Corchorus olitorius HOM05D002414 ORTHO05D002531 9.3e-22 107.8 190 42.6
Ah.10g037050 Amaranthus hybridus HOM05D002414 ORTHO05D002531 1.2e-21 107.5 214 40.7
AUR62040698 Chenopodium quinoa HOM05D002414 ORTHO05D002531 1.2e-21 107.5 196 39.8
MELO3C023887.2 Cucumis melo HOM05D002414 ORTHO05D002531 1.2e-21 107.5 193 42.5
CsaV3_5G008390 Cucumis sativus L. HOM05D002414 ORTHO05D002531 1.6e-21 107.1 190 42.6
Prupe.2G239800 Prunus persica HOM05D002414 ORTHO05D002531 1.6e-21 107.1 191 42.9
EL10Ac2g04700 Beta vulgaris HOM05D002414 ORTHO05D002531 2.7e-21 106.3 196 38.8
CANSAT56G0766 Cannabis sativa HOM05D002414 ORTHO05D002531 2.7e-21 106.3 187 41.7
Ciclev10031537m.g Citrus clementina HOM05D002414 ORTHO05D002531 6.0e-21 105.1 219 36.1
QL08p061277 Quercus lobata HOM05D002414 ORTHO05D002531 3.9e-20 102.4 193 42.0
Potri.010G199500 Populus trichocarpa HOM05D002414 ORTHO05D002531 8.7e-20 101.3 154 41.6
TAR623G1792 Trochodendron aralioides HOM05D002414 ORTHO05D002531 2.5e-19 99.8 201 39.3
ClCG07G003590 Citrullus lanatus HOM05D002414 ORTHO05D002531 4.3e-19 99.0 189 39.7
Glyma.18G034900 Glycine max HOM05D002414 ORTHO05D002531 9.7e-19 97.8 209 37.3
Solyc06g051790.4 Solanum lycopersicum HOM05D002414 ORTHO05D002531 9.7e-19 97.8 161 44.7
Hund13795 Selenicereus undatus HOM05D002414 ORTHO05D002531 1.6e-18 97.1 170 41.8
TAR369G0879 Trochodendron aralioides HOM05D002414 ORTHO05D002531 1.6e-18 97.1 147 44.9
PSO339G1200 Papaver somniferum HOM05D002414 ORTHO05D002531 2.8e-18 96.3 185 41.6
Sed0020180 Sechium edule HOM05D002414 ORTHO05D002531 8.2e-18 94.7 224 36.2
PGR142G0412 Punica granatum HOM05D002414 ORTHO05D002531 1.1e-17 94.4 129 48.1
Sed0012358 Sechium edule HOM05D002414 ORTHO05D002531 1.1e-17 94.4 189 39.2
Nn2g13475 Nelumbo nucifera HOM05D002414 ORTHO05D002531 1.4e-17 94.0 207 35.7
PSO513G0013 Papaver somniferum HOM05D002414 ORTHO05D002531 2.4e-17 93.2 138 46.4
Eucgr.J01230 Eucalyptus grandis HOM05D002414 ORTHO05D002531 4.1e-17 92.4 176 38.1
RcHm_v2.0_Chr1g0368311 Rosa chinensis HOM05D002414 ORTHO05D002531 4.1e-17 92.4 208 33.7
Psat0s4218g0040 Pisum sativum HOM05D002414 ORTHO05D002531 5.3e-17 92.0 195 38.5
THA.LOC104810046 Tarenaya hassleriana HOM05D002414 ORTHO05D002531 6.9e-17 91.7 247 36.0
Lj6g0023303 Lotus japonicus HOM05D002414 ORTHO05D002531 9.0e-17 91.3 177 40.1
Medtr3g068215 Medicago truncatula HOM05D002414 ORTHO05D002531 1.2e-16 90.9 147 41.5
Sc11g0007710 Simmondsia chinensis HOM05D002414 ORTHO05D002531 1.5e-16 90.5 176 38.1
Ca_08189_v3 Cicer arietinum L. HOM05D002414 ORTHO05D002531 3.4e-16 89.4 159 39.6
Glyma.11G222700 Glycine max HOM05D002414 ORTHO05D002531 2.9e-15 86.3 162 38.3
unitig_0.g1623 Utricularia gibba HOM05D002414 ORTHO05D002531 3.8e-15 85.9 213 31.0
Phvul.001G236100 Phaseolus vulgaris HOM05D002414 ORTHO05D002531 5.0e-15 85.5 178 36.5
FvH4_7g23071 Fragaria vesca HOM05D002414 ORTHO05D002531 6.5e-15 85.1 208 32.2
VMungo1383G2026 Vigna mungo HOM05D002414 ORTHO05D002531 6.5e-15 85.1 176 35.8
RcHm_v2.0_Chr1g0368321 Rosa chinensis HOM05D002414 ORTHO05D002531 8.5e-15 84.7 179 38.5
FAN03G1385 Fragaria x ananassa HOM05D002414 ORTHO05D002531 1.1e-14 84.3 209 32.1
SalBow5G0406 Salvia bowleyana HOM05D002414 ORTHO05D002531 1.4e-14 84.0 188 37.2
arahy.Tifrunner.gnm1.ann1.8S2BPT Arachis hypogaea HOM05D002414 ORTHO05D002531 1.9e-14 83.6 162 37.0
HanXRQChr08g0221161 Helianthus annuus HOM05D002414 ORTHO05D002531 1.9e-14 83.6 156 36.5
TWI63G1558 Tripterygium wilfordii HOM05D002414 ORTHO05D002531 1.9e-14 83.6 160 38.1
Cpa.g.sc19.271 Carica papaya HOM05D002414 ORTHO05D002531 2.5e-14 83.2 255 30.2
Lalb_Chr15g0084551 Lupinus albus HOM05D002414 ORTHO05D002531 2.5e-14 83.2 163 35.0
PSO513G0123 Papaver somniferum HOM05D002414 ORTHO05D002531 2.5e-14 83.2 134 41.0
FAN01G0953 Fragaria x ananassa HOM05D002414 ORTHO05D002531 3.2e-14 82.8 178 37.1
FAN01G2131 Fragaria x ananassa HOM05D002414 ORTHO05D002531 3.2e-14 82.8 178 37.1
FAN06G0979 Fragaria x ananassa HOM05D002414 ORTHO05D002531 3.2e-14 82.8 178 37.1
FAN06G1258 Fragaria x ananassa HOM05D002414 ORTHO05D002531 3.2e-14 82.8 208 31.2
FAN06G1983 Fragaria x ananassa HOM05D002414 ORTHO05D002531 3.2e-14 82.8 178 37.1
MD01G1139300 Malus domestica HOM05D002414 ORTHO05D002531 3.2e-14 82.8 206 36.9
Lj8C79T13 Lonicera japonica HOM05D002414 ORTHO05D002531 4.2e-14 82.4 131 41.2
arahy.Tifrunner.gnm1.ann1.AGZ93U Arachis hypogaea HOM05D002414 ORTHO05D002531 7.2e-14 81.6 145 36.6
FvH4_7g23070 Fragaria vesca HOM05D002414 ORTHO05D002531 9.4e-14 81.3 178 36.5
ECA233G4115 Erigeron canadensis HOM05D002414 ORTHO05D002531 1.2e-13 80.9 207 31.9
PSO017G7355 Papaver somniferum HOM05D002414 ORTHO05D002531 2.1e-13 80.1 134 39.6
Duzib114G0503 Durio zibethinus HOM05D002414 ORTHO05D002531 2.7e-13 79.7 177 39.0
FAN01G1411 Fragaria x ananassa HOM05D002414 ORTHO05D002531 4.6e-13 79.0 168 34.5
Lalb_Chr18g0053061 Lupinus albus HOM05D002414 ORTHO05D002531 6.1e-13 78.6 164 35.4
Aqoxy2G02338 Aquilegia oxysepala HOM05D002414 ORTHO05D002531 7.9e-13 78.2 142 40.1
Eucgr.J01227 Eucalyptus grandis HOM05D002414 ORTHO05D002531 7.9e-13 78.2 147 38.1
PSO339G0723 Papaver somniferum HOM05D002414 ORTHO05D002531 1.4e-12 77.4 134 38.8
Lsat_1_v5_gn_8_14881 Lactuca sativa HOM05D002414 ORTHO05D002531 1.8e-12 77.0 157 33.8
AT2G39740 Arabidopsis thaliana HOM05D002414 ORTHO05D002531 3.9e-12 75.9 141 39.0
BcaB06g29102 Brassica carinata HOM05D002414 ORTHO05D002531 6.7e-12 75.1 150 36.7
Sp4g22010 Schrenkiella parvula HOM05D002414 ORTHO05D002531 1.5e-11 73.9 151 37.1
AL4G37210 Arabidopsis lyrata HOM05D002414 ORTHO05D002531 2.0e-11 73.6 150 36.0
Aa31LG5G19900 Aethionema arabicum HOM05D002414 ORTHO05D002531 2.5e-11 73.2 179 33.5
A04p30290 Brassica napus HOM05D002414 ORTHO05D002531 3.3e-11 72.8 198 33.3
BraA04t18478Z Brassica rapa HOM05D002414 ORTHO05D002531 3.3e-11 72.8 198 33.3
PSO478G1772 Papaver somniferum HOM05D002414 ORTHO05D002531 4.3e-11 72.4 135 37.8
BcaC02g07434 Brassica carinata HOM05D002414 ORTHO05D002531 7.4e-11 71.6 145 37.2
C04p67550 Brassica napus HOM05D002414 ORTHO05D002531 7.4e-11 71.6 145 37.2
FAN10G1345 Fragaria x ananassa HOM05D002414 ORTHO05D002531 1.3e-10 70.9 122 40.2
FAN10G1514 Fragaria x ananassa HOM05D002414 ORTHO05D002531 1.3e-10 70.9 200 31.5
Carub.0004s2180 Capsella rubella HOM05D002414 ORTHO05D002531 2.8e-10 69.7 150 35.3
CARHR134590 Cardamine hirsuta HOM05D002414 ORTHO05D002531 4.8e-10 68.9 179 31.8
BolC4t28252H Brassica oleracea HOM05D002414 ORTHO05D002531 6.3e-10 68.6 193 31.1
Aa31LG5G19910 Aethionema arabicum HOM05D002414 ORTHO05D002531 2.4e-09 66.6 169 34.9
Thhalv10016564m.g Eutrema salsugineum HOM05D002414 ORTHO05D002531 3.1e-09 66.2 139 37.4
HPP92_027009 Vanilla planifolia HOM05D002414 ORTHO05D002531 4.1e-09 65.9 167 35.9
ATR0559G259 Amborella trichopoda HOM05D002414 ORTHO05D002531 1.5e-08 63.9 139 33.8
CDE02G1061 Ceratophyllum demersum HOM05D002414 ORTHO05D002531 2.6e-08 63.2 188 29.3
FAN10G3047 Fragaria x ananassa HOM05D002414 ORTHO05D002531 5.9e-08 62.0 200 30.5
PSO339G5487 Papaver somniferum HOM05D002414 ORTHO05D002531 2.9e-07 59.7 128 34.4


User provided reference genes

Program Settings