Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041058 Camellia sinensis var. sinensis HOM05D007638 ORTHO05D009805 6.3e-61 237.3 121 100.0
Dinv39130 Davidia involucrata HOM05D007638 ORTHO05D009805 3.7e-37 158.3 117 70.1
GSVIVG01001312001 Vitis vinifera HOM05D007638 ORTHO05D009805 1.8e-31 139.4 117 61.5
TAR636G1390 Trochodendron aralioides HOM05D007638 ORTHO05D009805 4.0e-31 138.3 118 67.8
Oeu017018.1 Olea europaea HOM05D007638 ORTHO05D009805 1.7e-29 132.9 107 65.4
Rhsim09G0039100 Rhododendron simsii HOM05D007638 ORTHO05D009805 2.2e-29 132.5 121 63.6
TWI15G0131 Tripterygium wilfordii HOM05D007638 ORTHO05D009805 3.7e-29 131.7 117 59.8
Prupe.5G071400 Prunus persica HOM05D007638 ORTHO05D009805 1.1e-28 130.2 124 62.1
Gohir.D09G190600 Gossypium hirsutum HOM05D007638 ORTHO05D009805 1.8e-28 129.4 121 58.7
Gorai.006G213300 Gossypium raimondii HOM05D007638 ORTHO05D009805 1.8e-28 129.4 121 58.7
Hma1.2p1_2238F.1_g317800 Hydrangea macrophylla HOM05D007638 ORTHO05D009805 1.8e-28 129.4 118 63.6
Cc08_g12610 Coffea canephora HOM05D007638 ORTHO05D009805 5.4e-28 127.9 119 60.5
vmacro00554 Vaccinium macrocarpon HOM05D007638 ORTHO05D009805 5.4e-28 127.9 120 59.2
Solyc08g078750.4 Solanum lycopersicum HOM05D007638 ORTHO05D009805 9.2e-28 127.1 117 57.3
Sopen08g027220 Solanum pennellii HOM05D007638 ORTHO05D009805 9.2e-28 127.1 117 57.3
Gohir.A09G196000 Gossypium hirsutum HOM05D007638 ORTHO05D009805 1.6e-27 126.3 121 57.9
Thecc.03G253300 Theobroma cacao HOM05D007638 ORTHO05D009805 1.6e-27 126.3 121 57.9
Duzib084G1003 Durio zibethinus HOM05D007638 ORTHO05D009805 5.9e-27 124.4 119 55.5
PGSC0003DMG400004754 Solanum tuberosum HOM05D007638 ORTHO05D009805 5.9e-27 124.4 117 56.4
HanXRQChr17g0549771 Helianthus annuus HOM05D007638 ORTHO05D009805 7.8e-27 124.0 121 57.0
FvH4_5g18700 Fragaria vesca HOM05D007638 ORTHO05D009805 2.3e-26 122.5 122 59.0
CAN.G1218.20 Capsicum annuum HOM05D007638 ORTHO05D009805 5.0e-26 121.3 118 55.9
CiPaw.12G109000 Carya illinoinensis HOM05D007638 ORTHO05D009805 1.1e-25 120.2 117 56.4
Nn1g01039 Nelumbo nucifera HOM05D007638 ORTHO05D009805 1.9e-25 119.4 121 59.5
Manes.02G038700 Manihot esculenta HOM05D007638 ORTHO05D009805 4.3e-25 118.2 123 56.1
MELO3C033998.2 Cucumis melo HOM05D007638 ORTHO05D009805 7.3e-25 117.5 122 54.1
FAN13G2113 Fragaria x ananassa HOM05D007638 ORTHO05D009805 1.6e-24 116.3 126 57.1
MD06G1060400 Malus domestica HOM05D007638 ORTHO05D009805 2.8e-24 115.5 129 54.3
Cpa.g.sc29.142 Carica papaya HOM05D007638 ORTHO05D009805 2.3e-23 112.5 122 54.1
RcHm_v2.0_Chr7g0202991 Rosa chinensis HOM05D007638 ORTHO05D009805 2.3e-23 112.5 127 54.3
QL12p012553 Quercus lobata HOM05D007638 ORTHO05D009805 3.1e-23 112.1 120 55.0
Sed0016401 Sechium edule HOM05D007638 ORTHO05D009805 3.1e-23 112.1 118 52.5
CsaV3_5G004170 Cucumis sativus L. HOM05D007638 ORTHO05D009805 4.0e-23 111.7 122 53.3
Hund14529 Selenicereus undatus HOM05D007638 ORTHO05D009805 8.9e-23 110.5 121 50.4
ClCG01G003990 Citrullus lanatus HOM05D007638 ORTHO05D009805 1.2e-22 110.2 118 53.4
Lsat_1_v5_gn_3_541 Lactuca sativa HOM05D007638 ORTHO05D009805 1.2e-22 110.2 108 58.3
Lj4g0022413 Lotus japonicus HOM05D007638 ORTHO05D009805 1.2e-22 110.2 120 54.2
Ciclev10020230m.g Citrus clementina HOM05D007638 ORTHO05D009805 2.0e-22 109.4 128 55.5
Sc07g0009320 Simmondsia chinensis HOM05D007638 ORTHO05D009805 3.4e-22 108.6 120 52.5
Cfa012740 Carpinus fangiana HOM05D007638 ORTHO05D009805 5.8e-22 107.8 132 49.2
Ca_21958_v3 Cicer arietinum L. HOM05D007638 ORTHO05D009805 9.8e-22 107.1 122 54.9
PGR031G3001 Punica granatum HOM05D007638 ORTHO05D009805 9.8e-22 107.1 115 51.3
Nitab4.5_0008481g0020 Nicotiana tabacum HOM05D007638 ORTHO05D009805 2.2e-21 105.9 117 50.4
Potri.003G110600 Populus trichocarpa HOM05D007638 ORTHO05D009805 6.4e-21 104.4 125 50.4
DCAR_008487 Daucus carota HOM05D007638 ORTHO05D009805 1.9e-20 102.8 110 54.5
Eucgr.D02064 Eucalyptus grandis HOM05D007638 ORTHO05D009805 1.2e-19 100.1 118 47.5
Atru.chr9.1327 Acer truncatum HOM05D007638 ORTHO05D009805 1.6e-19 99.8 121 52.9
Lalb_Chr16g0389341 Lupinus albus HOM05D007638 ORTHO05D009805 1.6e-19 99.8 124 53.2
Migut.A00967 Erythranthe guttata HOM05D007638 ORTHO05D009805 2.7e-19 99.0 117 51.3
arahy.Tifrunner.gnm1.ann1.UY0NCU Arachis hypogaea HOM05D007638 ORTHO05D009805 3.5e-19 98.6 127 50.4
arahy.Tifrunner.gnm1.ann1.E4IRCP Arachis hypogaea HOM05D007638 ORTHO05D009805 4.6e-19 98.2 127 49.6
Ah.02g116770 Amaranthus hybridus HOM05D007638 ORTHO05D009805 7.8e-19 97.4 117 47.9
ATR1153G083 Amborella trichopoda HOM05D007638 ORTHO05D009805 5.0e-18 94.7 113 53.1
Sabra03G0076700 Salix brachista HOM05D007638 ORTHO05D009805 8.6e-18 94.0 128 46.9
CANSAT21G1304 Cannabis sativa HOM05D007638 ORTHO05D009805 1.5e-17 93.2 126 47.6
EL10Ac5g13054 Beta vulgaris HOM05D007638 ORTHO05D009805 5.6e-17 91.3 117 50.4
THA.LOC104812781 Tarenaya hassleriana HOM05D007638 ORTHO05D009805 9.5e-17 90.5 106 49.1
Eucgr.L01520 Eucalyptus grandis HOM05D007638 ORTHO05D009805 2.1e-16 89.4 117 45.3
Glyma.05G058500 Glycine max HOM05D007638 ORTHO05D009805 2.1e-16 89.4 139 44.6
Psat4g071600 Pisum sativum HOM05D007638 ORTHO05D009805 2.1e-16 89.4 122 47.5
FAN08G1927 Fragaria x ananassa HOM05D007638 ORTHO05D009805 3.6e-16 88.6 111 51.4
Hma1.2p1_3173F.1_g333580 Hydrangea macrophylla HOM05D007638 ORTHO05D009805 3.6e-16 88.6 92 59.8
SGA_v2.0_scaffold120G32873 Striga asiatica HOM05D007638 ORTHO05D009805 1.1e-15 87.0 183 36.1
CDE11G1220 Ceratophyllum demersum HOM05D007638 ORTHO05D009805 5.8e-14 81.3 105 47.6
Haze_07891 Corylus avellana HOM05D007638 ORTHO05D009805 9.8e-14 80.5 117 46.2
Actinidia02124 Actinidia chinensis HOM05D007638 ORTHO05D009805 8.3e-13 77.4 132 44.7
AUR62007504 Chenopodium quinoa HOM05D007638 ORTHO05D009805 4.1e-12 75.1 106 44.3
Aa31LG2G12650 Aethionema arabicum HOM05D007638 ORTHO05D009805 7.8e-11 70.9 121 38.8
PSO781G0038 Papaver somniferum HOM05D007638 ORTHO05D009805 1.0e-10 70.5 133 41.4
TPR.G37700 Trifolium pratense HOM05D007638 ORTHO05D009805 3.9e-10 68.6 120 44.2
Migut.A00966 Erythranthe guttata HOM05D007638 ORTHO05D009805 8.6e-10 67.4 58 60.3
Peaxi162Scf00002g00171 Petunia axillaris HOM05D007638 ORTHO05D009805 1.1e-09 67.0 95 44.2
Sp7g15100 Schrenkiella parvula HOM05D007638 ORTHO05D009805 3.3e-09 65.5 94 43.6
AUR62039957 Chenopodium quinoa HOM05D007638 ORTHO05D009805 1.2e-08 63.5 116 37.1
Aqoxy7G00749 Aquilegia oxysepala HOM05D007638 ORTHO05D009805 1.1e-07 60.5 116 37.1
Lsat_1_v5_gn_4_33340 Lactuca sativa HOM05D007638 ORTHO05D009805 1.1e-07 60.5 88 42.0
SEGI_06661 Sequoiadendron giganteum HOM05D007638 ORTHO05D009805 4.4e-06 55.1 97 37.1
SEGI_30518 Sequoiadendron giganteum HOM05D007638 ORTHO05D009805 9.9e-06 53.9 95 37.9


User provided reference genes

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