Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041034 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.3e-49 199.5 105 100.0
CSS0019882 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 2.4e-40 168.7 106 85.8
CSS0028860 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 3.2e-37 158.3 109 80.7
CSS0031893 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 7.2e-37 157.1 108 81.5
CSS0018183 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.1e-34 149.8 111 75.7
CSS0036875 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.1e-32 143.3 105 76.2
CSS0048440 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 4.2e-29 131.3 105 68.6
CSS0048580 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 2.0e-26 122.5 73 87.7
CSS0021661 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 5.7e-26 120.9 73 86.3
CSS0009256 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.3e-25 119.8 73 86.3
CSS0049883 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 6.3e-25 117.5 73 83.6
CSS0037647 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.3e-22 109.8 66 86.4
Rhsim01G0023600 Rhododendron simsii HOM05D007659 ORTHO05D009227 1.7e-14 82.8 87 51.7
Dinv41341 Davidia involucrata HOM05D007659 ORTHO05D009227 9.5e-13 77.0 77 59.7
Hma1.2p1_1084F.1_g255330 Hydrangea macrophylla HOM05D007659 ORTHO05D009227 6.8e-11 70.9 77 58.4
Actinidia28561 Actinidia chinensis HOM05D007659 ORTHO05D009227 2.2e-09 65.9 79 53.2
Nn8g40114 Nelumbo nucifera HOM05D007659 ORTHO05D009227 1.8e-08 62.8 76 47.4
Cfa019408 Carpinus fangiana HOM05D007659 ORTHO05D009227 7.0e-08 60.8 88 40.9
Haze_19137 Corylus avellana HOM05D007659 ORTHO05D009227 1.2e-07 60.1 88 40.9
Haze_19127 Corylus avellana HOM05D007659 ORTHO05D009227 1.6e-07 59.7 88 42.0
Haze_19124 Corylus avellana HOM05D007659 ORTHO05D009227 4.5e-07 58.2 70 45.7
Haze_19128 Corylus avellana HOM05D007659 ORTHO05D009227 5.9e-07 57.8 88 39.8
vmacro13049 Vaccinium macrocarpon HOM05D007659 ORTHO05D009227 1.0e-06 57.0 56 53.6
CiPaw.15G164100 Carya illinoinensis HOM05D007659 ORTHO05D009227 2.3e-06 55.8 78 44.9
RcHm_v2.0_Chr4g0405451 Rosa chinensis HOM05D007659 ORTHO05D009227 2.9e-06 55.5 84 45.2
GSVIVG01023691001 Vitis vinifera HOM05D007659 ORTHO05D009227 2.9e-06 55.5 89 44.9
Haze_19136 Corylus avellana HOM05D007659 ORTHO05D009227 3.8e-06 55.1 70 44.3
Prupe.1G101900 Prunus persica HOM05D007659 ORTHO05D009227 5.0e-06 54.7 90 42.2
Aqoxy7G03300 Aquilegia oxysepala HOM05D007659 ORTHO05D009227 8.6e-06 53.9 81 39.5


User provided reference genes

Program Settings