Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041027 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 1.5e-86 322.8 159 100.0
CSS0021722 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 8.2e-85 317.0 159 98.7
Rhsim06G0182000 Rhododendron simsii HOM05D007635 ORTHO05D009612 7.5e-46 187.6 171 64.3
Rhsim06G0183000 Rhododendron simsii HOM05D007635 ORTHO05D009612 7.5e-46 187.6 171 64.3
vmacro12032 Vaccinium macrocarpon HOM05D007635 ORTHO05D009612 1.4e-44 183.3 193 59.6
Dinv26633 Davidia involucrata HOM05D007635 ORTHO05D009612 3.2e-44 182.2 131 75.6
Nn1g07615 Nelumbo nucifera HOM05D007635 ORTHO05D009612 2.7e-43 179.1 99 88.9
GSVIVG01030149001 Vitis vinifera HOM05D007635 ORTHO05D009612 1.3e-42 176.8 118 76.3
Lalb_Chr20g0111441 Lupinus albus HOM05D007635 ORTHO05D009612 1.9e-41 172.9 153 64.1
Actinidia12337 Actinidia chinensis HOM05D007635 ORTHO05D009612 1.2e-40 170.2 132 68.2
arahy.Tifrunner.gnm1.ann1.X3I9NV Arachis hypogaea HOM05D007635 ORTHO05D009612 4.7e-40 168.3 115 74.8
TAR374G1245 Trochodendron aralioides HOM05D007635 ORTHO05D009612 1.1e-39 167.2 127 70.1
Glyma.19G198300 Glycine max HOM05D007635 ORTHO05D009612 1.4e-39 166.8 113 78.8
MSTRG.12845 Avicennia marina HOM05D007635 ORTHO05D009612 1.8e-39 166.4 162 58.0
Cc05_g09950 Coffea canephora HOM05D007635 ORTHO05D009612 1.8e-39 166.4 157 59.2
Glyma.03G200700 Glycine max HOM05D007635 ORTHO05D009612 4.0e-39 165.2 148 65.5
Lj1g0026019 Lotus japonicus HOM05D007635 ORTHO05D009612 4.0e-39 165.2 143 62.9
RcHm_v2.0_Chr3g0475481 Rosa chinensis HOM05D007635 ORTHO05D009612 8.9e-39 164.1 171 55.0
Potri.001G053700 Populus trichocarpa HOM05D007635 ORTHO05D009612 1.2e-38 163.7 120 74.2
CiPaw.09G019400 Carya illinoinensis HOM05D007635 ORTHO05D009612 1.5e-38 163.3 94 85.1
Manes.15G049600 Manihot esculenta HOM05D007635 ORTHO05D009612 1.5e-38 163.3 95 83.2
Prupe.7G097800 Prunus persica HOM05D007635 ORTHO05D009612 1.5e-38 163.3 107 77.6
unitig_26.g8994 Utricularia gibba HOM05D007635 ORTHO05D009612 1.5e-38 163.3 136 62.5
Ciclev10006014m.g Citrus clementina HOM05D007635 ORTHO05D009612 2.0e-38 162.9 94 84.0
FAN02G0889 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.0e-38 162.9 104 77.9
FAN05G0948 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.0e-38 162.9 104 77.9
Medtr7g105840 Medicago truncatula HOM05D007635 ORTHO05D009612 2.0e-38 162.9 94 85.1
Ca_09045_v3 Cicer arietinum L. HOM05D007635 ORTHO05D009612 2.6e-38 162.5 111 75.7
Nitab4.5_0000923g0190 Nicotiana tabacum HOM05D007635 ORTHO05D009612 2.6e-38 162.5 103 74.8
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 3.4e-38 162.2 94 86.2
Haze_19686 Corylus avellana HOM05D007635 ORTHO05D009612 3.4e-38 162.2 94 86.2
QL07p037425 Quercus lobata HOM05D007635 ORTHO05D009612 3.4e-38 162.2 93 82.8
CANSAT64G1146 Cannabis sativa HOM05D007635 ORTHO05D009612 5.8e-38 161.4 104 78.8
ATR0751G143 Amborella trichopoda HOM05D007635 ORTHO05D009612 1.3e-37 160.2 127 67.7
FvH4_6g20030 Fragaria vesca HOM05D007635 ORTHO05D009612 1.3e-37 160.2 104 76.9
FAN14G1263 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.3e-37 160.2 104 76.9
Ah.05g169970 Amaranthus hybridus HOM05D007635 ORTHO05D009612 2.2e-37 159.5 166 56.0
CAN.G904.10 Capsicum annuum HOM05D007635 ORTHO05D009612 2.2e-37 159.5 99 77.8
FAN09G2965 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.2e-37 159.5 107 73.8
TPR.G23321 Trifolium pratense HOM05D007635 ORTHO05D009612 2.2e-37 159.5 97 82.5
Eucgr.K02034 Eucalyptus grandis HOM05D007635 ORTHO05D009612 3.7e-37 158.7 116 71.6
PGR142G1826 Punica granatum HOM05D007635 ORTHO05D009612 4.9e-37 158.3 128 67.2
Duzib268G0659 Durio zibethinus HOM05D007635 ORTHO05D009612 6.4e-37 157.9 95 80.0
Phvul.001G194300 Phaseolus vulgaris HOM05D007635 ORTHO05D009612 6.4e-37 157.9 102 77.5
VMungo1383G2560 Vigna mungo HOM05D007635 ORTHO05D009612 6.4e-37 157.9 94 80.9
PSO675G5663 Papaver somniferum HOM05D007635 ORTHO05D009612 8.3e-37 157.5 147 60.5
Psat3g030120 Pisum sativum HOM05D003127 ORTHO05D003709 8.3e-37 157.5 121 71.1
Solyc10g007670.4 Solanum lycopersicum HOM05D007635 ORTHO05D009612 8.3e-37 157.5 99 76.8
Sopen10g003580 Solanum pennellii HOM05D007635 ORTHO05D009612 8.3e-37 157.5 99 76.8
PGSC0003DMG400021288 Solanum tuberosum HOM05D007635 ORTHO05D009612 8.3e-37 157.5 99 76.8
Sc26g0000090 Simmondsia chinensis HOM05D007635 ORTHO05D009612 1.4e-36 156.8 164 57.3
Peaxi162Scf00035g02213 Petunia axillaris HOM05D007635 ORTHO05D009612 2.4e-36 156.0 163 55.8
CARHR127160 Cardamine hirsuta HOM05D007635 ORTHO05D009612 3.2e-36 155.6 97 77.3
Eucgr.L01778 Eucalyptus grandis HOM05D007635 ORTHO05D009612 4.1e-36 155.2 94 79.8
Lsat_1_v5_gn_7_99401 Lactuca sativa HOM05D007635 ORTHO05D009612 7.1e-36 154.5 109 71.6
AUR62027757 Chenopodium quinoa HOM05D007635 ORTHO05D009612 9.2e-36 154.1 99 73.7
AUR62038521 Chenopodium quinoa HOM05D007635 ORTHO05D009612 9.2e-36 154.1 99 73.7
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 9.2e-36 154.1 95 81.1
PSO541G5044 Papaver somniferum HOM05D007635 ORTHO05D009612 1.6e-35 153.3 92 79.3
Aa31LG5G4080 Aethionema arabicum HOM05D007635 ORTHO05D009612 2.1e-35 152.9 97 74.2
Sp4g15480 Schrenkiella parvula HOM05D007635 ORTHO05D009612 2.1e-35 152.9 96 76.0
SGA_v2.0_scaffold130G34228 Striga asiatica HOM05D007635 ORTHO05D009612 2.7e-35 152.5 171 56.7
Zm00001eb101710 Zea mays HOM05D007635 ORTHO05D009612 3.5e-35 152.1 139 56.8
AL4G28740 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 4.6e-35 151.8 96 76.0
AL569U10010 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 4.6e-35 151.8 96 76.0
Gorai.011G162800 Gossypium raimondii HOM05D007635 ORTHO05D009612 4.6e-35 151.8 95 75.8
SEGI_23489 Sequoiadendron giganteum HOM05D007635 ORTHO05D009612 6.0e-35 151.4 115 68.7
BcaB06g28657 Brassica carinata HOM05D007635 ORTHO05D009612 7.8e-35 151.0 96 75.0
A04p25480 Brassica napus HOM05D007635 ORTHO05D009612 7.8e-35 151.0 96 75.0
BraA04t18051Z Brassica rapa HOM05D007635 ORTHO05D009612 7.8e-35 151.0 96 75.0
BcaC02g07856 Brassica carinata HOM05D007635 ORTHO05D009612 1.0e-34 150.6 96 74.0
BolC4t27744H Brassica oleracea HOM05D007635 ORTHO05D009612 1.0e-34 150.6 96 74.0
ECA236G3620 Erigeron canadensis HOM05D007635 ORTHO05D009612 1.0e-34 150.6 114 68.4
MBI15_g36010_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 1.0e-34 150.6 141 58.2
C04p62620 Brassica napus HOM05D007635 ORTHO05D009612 1.3e-34 150.2 96 74.0
CsaV3_3G037770 Cucumis sativus L. HOM05D007635 ORTHO05D009612 1.3e-34 150.2 113 68.1
Thhalv10017331m.g Eutrema salsugineum HOM05D007635 ORTHO05D009612 1.3e-34 150.2 96 74.0
AT2G33180 Arabidopsis thaliana HOM05D007635 ORTHO05D009612 1.7e-34 149.8 96 76.0
MBI15_g47427_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 2.3e-34 149.4 141 58.2
Os09g0481800 Oryza sativa ssp. japonica HOM05D007635 ORTHO05D009612 2.3e-34 149.4 139 56.1
Carub.0004s1461 Capsella rubella HOM05D007635 ORTHO05D009612 3.9e-34 148.7 96 74.0
ClCG10G018500 Citrullus lanatus HOM05D003127 ORTHO05D003709 5.1e-34 148.3 117 67.5
TWI09G0209 Tripterygium wilfordii HOM05D007635 ORTHO05D009612 5.1e-34 148.3 107 75.7
CBR_g50773 Chara braunii HOM05D007635 ORTHO05D009612 3.1e-31 139.0 153 52.3
AagrBONN_evm.TU.Sc2ySwM_362.2476 Anthoceros agrestis HOM05D007635 ORTHO05D009612 3.4e-30 135.6 117 59.0
Pp3c11_15670 Physcomitrium patens HOM05D007635 ORTHO05D009612 9.9e-30 134.0 92 70.7
Nitab4.5_0002209g0110 Nicotiana tabacum HOM05D007635 ORTHO05D009612 2.9e-29 132.5 160 50.0
Atru.BG.99.p Acer truncatum HOM05D007635 ORTHO05D009612 4.1e-28 128.6 71 85.9
MD12G1037400 Malus domestica HOM05D007635 ORTHO05D009612 2.1e-27 126.3 71 81.7
EL10Ac1g01217 Beta vulgaris HOM05D007635 ORTHO05D009612 3.9e-26 122.1 77 74.0
Aqoxy2G03911 Aquilegia oxysepala HOM05D007635 ORTHO05D009612 1.9e-25 119.8 82 72.0
Cpa.g.sc59.77 Carica papaya HOM05D007635 ORTHO05D009612 2.1e-24 116.3 125 49.6
FAN05G1739 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.8e-23 113.2 62 87.1
HanXRQChr11g0329581 Helianthus annuus HOM05D007635 ORTHO05D009612 3.1e-23 112.5 64 84.4
MELO3C009519.2 Cucumis melo HOM05D003127 ORTHO05D003709 2.6e-22 109.4 63 82.5
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 5.8e-22 108.2 63 79.4
HPP92_017857 Vanilla planifolia HOM05D007635 ORTHO05D009612 1.3e-21 107.1 63 79.4
Migut.H02083 Erythranthe guttata HOM05D007635 ORTHO05D009612 2.9e-21 105.9 184 41.8
Pp3c11_15610 Physcomitrium patens HOM05D007635 ORTHO05D009612 6.6e-18 94.7 70 65.7


User provided reference genes

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