Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041009 Camellia sinensis var. sinensis HOM05D008314 ORTHO05D010369 1.5e-40 169.1 87 100.0
Dinv37824 Davidia involucrata HOM05D008314 ORTHO05D010369 5.1e-20 100.9 88 63.6
Actinidia24433 Actinidia chinensis HOM05D008314 ORTHO05D010369 2.8e-18 95.1 88 59.1
QL05p001376 Quercus lobata HOM05D008314 ORTHO05D010369 3.6e-18 94.7 87 60.9
FAN05G1710 Fragaria x ananassa HOM05D008314 ORTHO05D010369 6.2e-18 94.0 97 55.7
CiPaw.01G212000 Carya illinoinensis HOM05D008314 ORTHO05D010369 8.1e-18 93.6 89 59.6
RcHm_v2.0_Chr2g0147741 Rosa chinensis HOM05D008314 ORTHO05D010369 1.1e-17 93.2 95 58.9
FvH4_6g35740 Fragaria vesca HOM05D008314 ORTHO05D010369 8.9e-17 90.1 97 53.6
FAN09G4263 Fragaria x ananassa HOM05D008314 ORTHO05D010369 8.9e-17 90.1 97 53.6
Oeu008398.2 Olea europaea HOM05D008314 ORTHO05D010369 3.4e-16 88.2 85 56.5
Rhsim12G0213100 Rhododendron simsii HOM05D008314 ORTHO05D010369 5.8e-16 87.4 92 59.8
Thecc.03G325500 Theobroma cacao HOM05D008314 ORTHO05D010369 7.6e-16 87.0 87 54.0
Nn6g35721 Nelumbo nucifera HOM05D008314 ORTHO05D010369 1.7e-15 85.9 94 53.2
Oeu059021.1 Olea europaea HOM05D008314 ORTHO05D010369 1.7e-15 85.9 87 54.0
Duzib235G1505 Durio zibethinus HOM05D008314 ORTHO05D010369 2.9e-15 85.1 85 51.8
ClCG09G001340 Citrullus lanatus HOM05D008314 ORTHO05D010369 4.9e-15 84.3 90 53.3
SalBow6G0833 Salvia bowleyana HOM05D008314 ORTHO05D010369 8.4e-15 83.6 83 55.4
Cpa.g.sc25.184 Carica papaya HOM05D008314 ORTHO05D010369 1.9e-14 82.4 86 51.2
Sed0005090 Sechium edule HOM05D008314 ORTHO05D010369 1.9e-14 82.4 89 49.4
FAN02G2954 Fragaria x ananassa HOM05D008314 ORTHO05D010369 2.4e-14 82.0 97 49.5
Prupe.3G031600 Prunus persica HOM05D008314 ORTHO05D010369 2.4e-14 82.0 90 54.4
Manes.11G013300 Manihot esculenta HOM05D008314 ORTHO05D010369 4.2e-14 81.3 85 47.1
Rhsim08G0244000 Rhododendron simsii HOM05D008314 ORTHO05D010369 4.2e-14 81.3 98 46.9
Thecc.06G129300 Theobroma cacao HOM05D008314 ORTHO05D010369 5.4e-14 80.9 86 52.3
Potri.003G072000 Populus trichocarpa HOM05D008314 ORTHO05D010369 7.1e-14 80.5 87 48.3
MELO3C024311.2 Cucumis melo HOM05D008314 ORTHO05D010369 9.2e-14 80.1 90 48.9
Duzib160G0571 Durio zibethinus HOM05D008314 ORTHO05D010369 9.2e-14 80.1 87 52.9
TAR070G0001 Trochodendron aralioides HOM05D008314 ORTHO05D010369 9.2e-14 80.1 74 56.8
Atru.chr1.4110 Acer truncatum HOM05D008314 ORTHO05D010369 1.2e-13 79.7 88 51.1
Ciclev10027008m.g Citrus clementina HOM05D008314 ORTHO05D010369 1.2e-13 79.7 88 52.3
Cc04_g00790 Coffea canephora HOM05D008314 ORTHO05D010369 2.7e-13 78.6 85 49.4
CiPaw.01G212100 Carya illinoinensis HOM05D008314 ORTHO05D010369 3.5e-13 78.2 91 48.4
TWI14G0587 Tripterygium wilfordii HOM05D008314 ORTHO05D010369 3.5e-13 78.2 86 50.0
Gohir.D06G149000 Gossypium hirsutum HOM05D008314 ORTHO05D010369 1.0e-12 76.6 84 50.0
Duzib160G0115 Durio zibethinus HOM05D008314 ORTHO05D010369 1.3e-12 76.3 75 50.7
Gohir.A06G143350 Gossypium hirsutum HOM05D008314 ORTHO05D010369 1.7e-12 75.9 84 50.0
Phvul.010G123800 Phaseolus vulgaris HOM05D008314 ORTHO05D010369 2.3e-12 75.5 84 50.0
arahy.Tifrunner.gnm1.ann1.K03VIU Arachis hypogaea HOM05D008314 ORTHO05D010369 1.5e-11 72.8 88 45.5
Gorai.010G173500 Gossypium raimondii HOM05D008314 ORTHO05D010369 1.5e-11 72.8 85 48.2
arahy.Tifrunner.gnm1.ann1.0KI29H Arachis hypogaea HOM05D008314 ORTHO05D010369 1.9e-11 72.4 88 45.5
CsaV3_7G033990 Cucumis sativus L. HOM05D008314 ORTHO05D010369 3.3e-11 71.6 73 53.4
Glyma.16G013200 Glycine max HOM05D008314 ORTHO05D010369 3.3e-11 71.6 85 45.9
MD09G1173500 Malus domestica HOM05D008314 ORTHO05D010369 3.3e-11 71.6 103 46.6
COL.COLO4_30857 Corchorus olitorius HOM05D008314 ORTHO05D010369 4.3e-11 71.2 38 76.3
PSO135G0082 Papaver somniferum HOM05D008314 ORTHO05D010369 4.3e-11 71.2 82 50.0
Ciclev10026853m.g Citrus clementina HOM05D008314 ORTHO05D010369 5.6e-11 70.9 89 49.4
Lalb_Chr17g0343301 Lupinus albus HOM05D008314 ORTHO05D010369 7.3e-11 70.5 77 46.8
MBI13_g01687_MAGBIO Magnolia biondii HOM05D008314 ORTHO05D010369 7.3e-11 70.5 75 46.7
PSO724G1385 Papaver somniferum HOM05D008314 ORTHO05D010369 9.6e-11 70.1 84 51.2
AUR62001414 Chenopodium quinoa HOM05D008314 ORTHO05D010369 6.2e-10 67.4 89 43.8
ATR0099G003 Amborella trichopoda HOM05D008314 ORTHO05D010369 4.0e-09 64.7 88 42.0
AUR62025623 Chenopodium quinoa HOM05D008314 ORTHO05D010369 5.3e-09 64.3 90 40.0
SEGI_28829 Sequoiadendron giganteum HOM05D008314 ORTHO05D010369 9.0e-09 63.5 59 54.2
Oeu059020.1 Olea europaea HOM05D008314 ORTHO05D010369 3.4e-08 61.6 36 69.4
Psat4g165800 Pisum sativum HOM05D008314 ORTHO05D010369 3.4e-08 61.6 38 60.5
Os02g0564600 Oryza sativa ssp. japonica HOM05D008314 ORTHO05D010369 7.6e-08 60.5 38 65.8
Medtr8g022990 Medicago truncatula HOM05D008314 ORTHO05D010369 4.9e-07 57.8 80 41.2
Os03g0400700 Oryza sativa ssp. japonica HOM05D008314 ORTHO05D010369 2.4e-06 55.5 77 40.3
Zm00001eb182560 Zea mays HOM05D008314 ORTHO05D010369 4.2e-06 54.7 41 56.1
Duzib138G0723 Durio zibethinus HOM05D002087 ORTHO05D002101 9.3e-06 53.5 75 41.3
SEGI_18497 Sequoiadendron giganteum HOM05D042000 ORTHO05D010369 9.3e-06 53.5 31 71.0


User provided reference genes

Program Settings