Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2539.6 1269 100.0
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2528.1 1269 99.5
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 0.0e+00 2280.4 1269 89.0
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 0.0e+00 2275.7 1270 88.8
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 0.0e+00 2275.7 1263 89.1
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 0.0e+00 2275.4 1270 89.3
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 2267.3 1270 88.7
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 0.0e+00 2266.1 1268 87.9
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 0.0e+00 2263.4 1269 88.7
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 0.0e+00 2259.6 1267 88.0
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 0.0e+00 2255.3 1268 87.8
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2254.9 1268 87.6
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 0.0e+00 2254.9 1267 88.2
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 0.0e+00 2254.6 1267 87.8
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2254.2 1268 87.9
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 0.0e+00 2252.6 1261 87.8
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2250.3 1239 90.1
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 0.0e+00 2247.2 1267 86.8
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 0.0e+00 2243.4 1261 87.6
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 0.0e+00 2243.0 1267 87.4
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2240.7 1267 87.0
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 2239.9 1268 86.6
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 0.0e+00 2239.5 1269 87.5
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 0.0e+00 2235.7 1267 86.9
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2233.0 1267 86.7
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 2230.7 1208 91.8
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 0.0e+00 2225.7 1267 86.7
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 0.0e+00 2221.0 1267 86.0
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 0.0e+00 2219.9 1269 85.3
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 0.0e+00 2219.1 1269 85.4
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 0.0e+00 2217.6 1269 85.4
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 0.0e+00 2214.1 1272 85.1
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 0.0e+00 2213.0 1269 86.3
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 0.0e+00 2207.9 1266 85.5
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 0.0e+00 2207.6 1269 86.1
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 0.0e+00 2207.6 1267 86.4
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2203.7 1267 86.3
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 0.0e+00 2202.6 1267 85.2
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2202.2 1267 86.3
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2200.2 1267 85.3
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 0.0e+00 2200.2 1268 84.9
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2197.9 1267 85.1
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2196.4 1267 85.9
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2196.0 1262 86.5
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 0.0e+00 2195.6 1269 85.5
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 0.0e+00 2194.9 1267 84.9
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 0.0e+00 2194.1 1268 84.9
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2193.7 1267 85.1
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2193.3 1267 84.9
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 0.0e+00 2192.9 1267 84.9
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 0.0e+00 2191.4 1267 85.0
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 0.0e+00 2189.8 1267 84.7
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 0.0e+00 2188.7 1268 84.2
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2188.7 1267 84.7
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2188.3 1268 85.2
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 0.0e+00 2186.4 1267 84.7
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 0.0e+00 2185.2 1267 84.6
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 0.0e+00 2184.5 1267 84.8
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 0.0e+00 2183.3 1267 84.4
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2182.9 1268 85.0
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2180.6 1268 84.9
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2180.2 1267 84.3
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 0.0e+00 2179.1 1269 84.2
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 0.0e+00 2177.5 1267 84.5
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2176.4 1267 84.5
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 0.0e+00 2176.0 1268 84.5
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 0.0e+00 2175.6 1268 85.2
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 0.0e+00 2175.2 1268 84.5
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2173.3 1268 84.9
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 0.0e+00 2169.8 1267 84.1
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 0.0e+00 2169.8 1273 84.6
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 0.0e+00 2167.9 1249 85.1
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 2162.9 1267 83.9
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2161.7 1267 85.0
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 2159.4 1268 83.8
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 0.0e+00 2156.7 1266 84.1
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 0.0e+00 2154.8 1266 83.9
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 0.0e+00 2150.6 1270 84.1
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2141.3 1269 83.5
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 0.0e+00 2137.5 1249 84.5
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 0.0e+00 2136.7 1269 83.4
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 0.0e+00 2128.6 1266 82.7
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 0.0e+00 2122.4 1270 82.0
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 0.0e+00 2119.7 1274 83.0
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 0.0e+00 2117.8 1264 83.1
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 0.0e+00 2117.8 1268 83.0
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 2103.9 1268 81.9
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 0.0e+00 2082.4 1269 81.4
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2078.1 1267 82.4
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 0.0e+00 2071.2 1267 80.4
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2066.6 1270 79.4
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 0.0e+00 2060.8 1264 81.0
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2033.1 1266 80.5
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1991.1 1161 85.1
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 0.0e+00 1962.6 1270 75.6
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 0.0e+00 1960.7 1268 77.1
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1916.0 1271 75.5
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 0.0e+00 1873.2 1278 72.1
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1861.3 1270 75.4
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 1860.1 1069 84.8
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1859.0 1191 78.2
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 0.0e+00 1851.6 1249 73.7
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 0.0e+00 1848.2 1089 83.8
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 1835.1 1268 73.8
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 0.0e+00 1832.8 1271 71.4
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 0.0e+00 1792.3 1130 79.4
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 1661.0 963 83.6
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 0.0e+00 1548.5 1322 61.5
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 0.0e+00 1543.9 1048 73.1
Oeu029564.1 Olea europaea HOM05D001937 ORTHO05D007024 0.0e+00 1420.2 813 85.2
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 0.0e+00 1409.8 1268 61.7
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 1332.4 1338 53.9
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 0.0e+00 1295.8 1392 52.3
TAR636G0878 Trochodendron aralioides HOM05D001937 ORTHO05D007024 0.0e+00 1288.5 725 86.3
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 1196.4 1018 63.9
Dinv02208 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 1191.4 811 76.7
Dinv10935 Davidia involucrata HOM05D001937 ORTHO05D007024 3.2e-272 942.6 572 82.5
TAR636G1691 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.5e-266 923.7 502 91.4
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 6.9e-259 898.3 1252 41.6
CBR_g26054 Chara braunii HOM05D000019 ORTHO05D000002 1.0e-225 788.1 655 61.7
MD02G1239500 Malus domestica HOM05D001937 ORTHO05D007024 2.3e-214 750.4 528 72.5
TAR636G2433 Trochodendron aralioides HOM05D001937 ORTHO05D007024 2.6e-205 720.3 455 80.2
TAR636G1243 Trochodendron aralioides HOM05D001937 ORTHO05D007024 7.8e-194 682.2 389 88.7
CBR_g26059 Chara braunii HOM05D001937 ORTHO05D007024 8.7e-129 466.1 359 66.6
Potri.017G124400 Populus trichocarpa HOM05D001937 ORTHO05D007024 2.5e-120 438.0 312 72.8
Lalb_Chr16g0382841 Lupinus albus HOM05D001937 ORTHO05D007024 4.8e-111 407.1 270 77.8
Oeu061583.3 Olea europaea HOM05D001937 ORTHO05D007024 1.0e-81 309.7 480 43.1
SalBow2G0807 Salvia bowleyana HOM05D001937 ORTHO05D007024 4.3e-75 287.7 170 81.8
SalBow1G2752 Salvia bowleyana HOM05D001937 ORTHO05D007024 3.1e-73 281.6 170 80.6
SalBow1G1280 Salvia bowleyana HOM05D001937 ORTHO05D007024 1.2e-72 279.6 170 80.0
HPP92_019823 Vanilla planifolia HOM05D001937 ORTHO05D007024 2.0e-64 252.3 138 92.0
ECA234G0635 Erigeron canadensis HOM05D001937 ORTHO05D007024 7.8e-61 240.4 234 56.4
TAR636G3286 Trochodendron aralioides HOM05D001937 ORTHO05D043971 4.7e-50 204.5 116 81.9
HPP92_019822 Vanilla planifolia HOM05D001937 ORTHO05D007024 2.4e-41 175.6 152 65.8
TAR636G2347 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.5e-40 172.9 91 91.2
ECA234G4540 Erigeron canadensis HOM05D016619 ORTHO05D007024 4.9e-39 167.9 182 54.9
CBR_g39219 Chara braunii HOM05D001937 ORTHO05D043971 5.8e-32 144.4 98 69.4
HPP92_019824 Vanilla planifolia HOM05D001937 ORTHO05D007024 9.6e-27 127.1 104 62.5


User provided reference genes

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