Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040954 Camellia sinensis var. sinensis HOM05D000043 ORTHO05D026247 1.4e-94 350.1 248 100.0
CSS0007495 Camellia sinensis var. sinensis HOM05D000043 ORTHO05D015010 7.4e-40 168.3 228 61.8
Dinv24395 Davidia involucrata HOM05D000043 ORTHO05D002208 4.6e-18 95.9 228 32.5
Actinidia06610 Actinidia chinensis HOM05D000043 ORTHO05D002208 4.3e-16 89.4 71 59.2
TAR376G0221 Trochodendron aralioides HOM05D000043 ORTHO05D002208 6.9e-14 82.0 91 44.0
PGSC0003DMG400028732 Solanum tuberosum HOM05D000043 ORTHO05D002208 5.9e-13 79.0 80 50.0
Nitab4.5_0000496g0220 Nicotiana tabacum HOM05D000043 ORTHO05D002208 6.5e-12 75.5 80 47.5
Nitab4.5_0006582g0010 Nicotiana tabacum HOM05D000043 ORTHO05D002208 6.5e-12 75.5 80 47.5
Solyc07g008820.3 Solanum lycopersicum HOM05D000043 ORTHO05D002208 6.5e-12 75.5 80 47.5
Sopen07g004750 Solanum pennellii HOM05D000043 ORTHO05D002208 6.5e-12 75.5 80 47.5
Peaxi162Scf00353g00214 Petunia axillaris HOM05D000043 ORTHO05D002208 1.9e-11 73.9 80 42.5
vmacro12786 Vaccinium macrocarpon HOM05D000043 ORTHO05D002208 7.2e-11 72.0 75 45.3
Hma1.2p1_0539F.1_g174520 Hydrangea macrophylla HOM05D000043 ORTHO05D002208 1.0e-09 68.2 228 26.8
CAN.G1156.33 Capsicum annuum HOM05D000043 ORTHO05D002208 6.7e-09 65.5 80 43.8
DCAR_001201 Daucus carota HOM05D000043 ORTHO05D002208 8.8e-09 65.1 80 45.0
Sc16g0009460 Simmondsia chinensis HOM05D000043 ORTHO05D002208 2.0e-08 63.9 64 45.3
TWI79G1187 Tripterygium wilfordii HOM05D000043 ORTHO05D002208 3.3e-08 63.2 77 40.3
Ah.06g190870 Amaranthus hybridus HOM05D000043 ORTHO05D002208 5.7e-08 62.4 67 38.8
AUR62000495 Chenopodium quinoa HOM05D004025 ORTHO05D004929 5.7e-08 62.4 84 39.3
EL10Ac4g09597 Beta vulgaris HOM05D000043 ORTHO05D002208 1.3e-07 61.2 64 45.3
Oeu033672.1 Olea europaea HOM05D000043 ORTHO05D002208 1.3e-07 61.2 84 44.0
Hund07256 Selenicereus undatus HOM05D000043 ORTHO05D002208 1.3e-07 61.2 64 40.6
Aqoxy6G00281 Aquilegia oxysepala HOM05D000043 ORTHO05D002208 2.2e-07 60.5 93 34.4
Migut.H00685 Erythranthe guttata HOM05D000043 ORTHO05D002208 2.2e-07 60.5 89 36.0
TWI31G1078 Tripterygium wilfordii HOM05D000043 ORTHO05D002208 2.2e-07 60.5 77 41.6
Atru.chr4.858 Acer truncatum HOM05D000043 ORTHO05D026247 3.7e-07 59.7 86 40.7
Manes.12G157400 Manihot esculenta HOM05D000043 ORTHO05D002208 3.7e-07 59.7 81 40.7
MSTRG.2642 Avicennia marina HOM05D000043 ORTHO05D002208 4.8e-07 59.3 83 38.6
Hund21820 Selenicereus undatus HOM05D000043 ORTHO05D002208 4.8e-07 59.3 69 42.0
Ciclev10001207m.g Citrus clementina HOM05D000043 ORTHO05D002208 1.1e-06 58.2 74 43.2
Sabra07G0085300 Salix brachista HOM05D000043 ORTHO05D002208 2.4e-06 57.0 80 38.8
Haze_25280 Corylus avellana HOM05D000043 ORTHO05D002208 4.1e-06 56.2 85 34.1
Cfa002923 Carpinus fangiana HOM05D000043 ORTHO05D002208 5.3e-06 55.8 86 34.9
CiPaw.04G081000 Carya illinoinensis HOM05D000043 ORTHO05D002208 9.1e-06 55.1 79 43.0


User provided reference genes

Program Settings