Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040940 Camellia sinensis var. sinensis HOM05D006043 ORTHO05D007309 1.0e-79 300.1 156 100.0
Rhsim06G0171100 Rhododendron simsii HOM05D006043 ORTHO05D007309 8.7e-55 217.2 158 72.2
vmacro12136 Vaccinium macrocarpon HOM05D006043 ORTHO05D007309 8.4e-50 200.7 158 70.3
Manes.08G019800 Manihot esculenta HOM05D006043 ORTHO05D007309 1.8e-47 193.0 157 67.5
Eucgr.K02399 Eucalyptus grandis HOM05D006043 ORTHO05D007309 2.3e-47 192.6 157 66.9
Eucgr.K02384 Eucalyptus grandis HOM05D006043 ORTHO05D007309 8.7e-47 190.7 156 66.7
Eucgr.K02410 Eucalyptus grandis HOM05D006043 ORTHO05D007309 1.5e-46 189.9 156 66.0
Eucgr.K02389 Eucalyptus grandis HOM05D006043 ORTHO05D007309 5.6e-46 188.0 156 65.4
QL07p040748 Quercus lobata HOM05D006043 ORTHO05D007309 1.3e-45 186.8 155 65.8
Atru.chr8.1654 Acer truncatum HOM05D006043 ORTHO05D007309 4.8e-45 184.9 157 63.7
Cpa.g.sc5.89 Carica papaya HOM05D006043 ORTHO05D007309 1.1e-44 183.7 154 65.6
MELO3C009427.2 Cucumis melo HOM05D006043 ORTHO05D007309 2.4e-44 182.6 155 65.2
Cfa016525 Carpinus fangiana HOM05D006043 ORTHO05D007309 9.0e-44 180.6 157 64.3
ClCG10G019450 Citrullus lanatus HOM05D006043 ORTHO05D007309 1.5e-43 179.9 155 64.5
CsaV3_3G036730 Cucumis sativus L. HOM05D006043 ORTHO05D007309 1.5e-43 179.9 155 63.9
Ciclev10013017m.g Citrus clementina HOM05D006043 ORTHO05D007309 2.0e-43 179.5 157 63.7
MD14G1014200 Malus domestica HOM05D006043 ORTHO05D007309 2.9e-42 175.6 151 63.6
CANSAT80G1206 Cannabis sativa HOM05D006043 ORTHO05D007309 4.9e-42 174.9 143 63.6
Peaxi162Scf00412g00073 Petunia axillaris HOM05D006043 ORTHO05D007309 4.9e-42 174.9 145 65.5
Prupe.7G119300 Prunus persica HOM05D006043 ORTHO05D007309 6.5e-42 174.5 153 64.7
CiPaw.10G004600 Carya illinoinensis HOM05D006043 ORTHO05D007309 1.1e-41 173.7 159 63.5
Potri.013G014300 Populus trichocarpa HOM05D006043 ORTHO05D007309 1.4e-41 173.3 160 61.2
Duzib106G1072 Durio zibethinus HOM05D006043 ORTHO05D007309 4.2e-41 171.8 156 60.3
COL.COLO4_29832 Corchorus olitorius HOM05D006043 ORTHO05D007309 5.5e-41 171.4 158 58.2
HanXRQChr09g0259401 Helianthus annuus HOM05D006043 ORTHO05D007309 9.3e-41 170.6 146 61.0
FAN02G0054 Fragaria x ananassa HOM05D006043 ORTHO05D007309 2.1e-40 169.5 156 59.6
FvH4_6g17700 Fragaria vesca HOM05D006043 ORTHO05D007309 1.8e-39 166.4 156 57.7
Cc00_g32800 Coffea canephora HOM05D006043 ORTHO05D007309 2.3e-39 166.0 150 61.3
MD12G1016000 Malus domestica HOM05D006043 ORTHO05D007309 2.3e-39 166.0 158 60.1
RcHm_v2.0_Chr3g0471911 Rosa chinensis HOM05D006043 ORTHO05D007309 3.0e-39 165.6 156 59.6
Haze_19524 Corylus avellana HOM05D006043 ORTHO05D007309 3.9e-39 165.2 158 60.8
Gohir.D09G138000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 3.9e-39 165.2 148 60.1
Gorai.006G158600 Gossypium raimondii HOM05D006043 ORTHO05D007309 3.9e-39 165.2 148 60.1
Lalb_Chr20g0112261 Lupinus albus HOM05D006043 ORTHO05D007309 6.7e-39 164.5 155 60.0
Cc06_g05110 Coffea canephora HOM05D006043 ORTHO05D007309 8.7e-39 164.1 154 60.4
Gohir.A04G066428 Gossypium hirsutum HOM05D006043 ORTHO05D007309 8.7e-39 164.1 156 58.3
Gohir.D04G105000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 8.7e-39 164.1 156 58.3
Gorai.009G408700 Gossypium raimondii HOM05D006043 ORTHO05D007309 8.7e-39 164.1 156 58.3
Ca_08959_v3 Cicer arietinum L. HOM05D006043 ORTHO05D007309 2.5e-38 162.5 152 59.2
Duzib093G0521 Durio zibethinus HOM05D006043 ORTHO05D007309 2.5e-38 162.5 158 58.2
VMungo1383G3657 Vigna mungo HOM05D006043 ORTHO05D007309 4.3e-38 161.8 154 59.1
Dinv21268 Davidia involucrata HOM05D006043 ORTHO05D007309 5.7e-38 161.4 151 64.9
Medtr7g103520 Medicago truncatula HOM05D006043 ORTHO05D007309 1.3e-37 160.2 152 55.9
Glyma.03G190100 Glycine max HOM05D006043 ORTHO05D007309 4.8e-37 158.3 155 55.5
Lj1g0027910 Lotus japonicus HOM05D006043 ORTHO05D007309 2.4e-36 156.0 155 56.8
Phvul.001G185700 Phaseolus vulgaris HOM05D006043 ORTHO05D007309 2.4e-36 156.0 152 59.2
Glyma.19G190400 Glycine max HOM05D006043 ORTHO05D007309 2.0e-35 152.9 154 54.5
Eucgr.A01560 Eucalyptus grandis HOM05D006043 ORTHO05D007309 2.6e-35 152.5 120 64.2
TWI53G1797 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 2.6e-35 152.5 113 69.0
Gohir.A09G136312 Gossypium hirsutum HOM05D006043 ORTHO05D007309 5.9e-35 151.4 158 53.8
Sc07g0005350 Simmondsia chinensis HOM05D006043 ORTHO05D007309 5.9e-35 151.4 156 58.3
Nitab4.5_0010125g0040 Nicotiana tabacum HOM05D006043 ORTHO05D007309 7.7e-35 151.0 124 64.5
Oeu040545.1 Olea europaea HOM05D006043 ORTHO05D007309 7.7e-35 151.0 153 57.5
Psat3g036320 Pisum sativum HOM05D006043 ORTHO05D007309 1.0e-34 150.6 117 63.2
TPR.G7024 Trifolium pratense HOM05D006043 ORTHO05D007309 1.3e-34 150.2 154 53.2
MBI01_g32535_MAGBIO Magnolia biondii HOM05D006043 ORTHO05D007309 2.9e-34 149.1 150 60.0
Oeu030483.1 Olea europaea HOM05D006043 ORTHO05D007309 3.8e-34 148.7 150 58.0
PGR004G1627 Punica granatum HOM05D006043 ORTHO05D007309 8.5e-34 147.5 138 58.7
PGSC0003DMG400002724 Solanum tuberosum HOM05D006043 ORTHO05D007309 1.4e-33 146.7 149 59.1
CAN.G824.34 Capsicum annuum HOM05D006043 ORTHO05D007309 3.2e-33 145.6 154 55.8
Cc00_g05260 Coffea canephora HOM05D006043 ORTHO05D007309 9.4e-33 144.1 151 57.0
Sp3g08330 Schrenkiella parvula HOM05D006043 ORTHO05D007309 6.1e-32 141.4 150 52.7
Nn6g35076 Nelumbo nucifera HOM05D006043 ORTHO05D007309 1.4e-31 140.2 133 60.2
AL3G21330 Arabidopsis lyrata HOM05D006043 ORTHO05D007309 2.3e-31 139.4 151 52.3
Nitab4.5_0010125g0030 Nicotiana tabacum HOM05D006043 ORTHO05D007309 3.0e-31 139.0 158 50.6
Lsat_1_v5_gn_2_22321 Lactuca sativa HOM05D006043 ORTHO05D007309 6.7e-31 137.9 139 52.5
AT3G10020 Arabidopsis thaliana HOM05D006043 ORTHO05D007309 8.8e-31 137.5 151 51.0
SGA_v2.0_scaffold40G15419 Striga asiatica HOM05D006043 ORTHO05D007309 8.8e-31 137.5 154 55.2
Sed0027852 Sechium edule HOM05D006043 ORTHO05D007309 1.1e-30 137.1 145 51.7
Aqoxy1G00961 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 1.5e-30 136.7 153 52.9
CARHR084520 Cardamine hirsuta HOM05D006043 ORTHO05D007309 2.0e-30 136.3 153 49.0
Peaxi162Scf00412g00063 Petunia axillaris HOM05D006043 ORTHO05D007309 2.5e-30 136.0 158 51.3
BcaB03g11578 Brassica carinata HOM05D006043 ORTHO05D007309 4.3e-30 135.2 151 53.0
A05p39030 Brassica napus HOM05D006043 ORTHO05D007309 4.3e-30 135.2 151 51.7
Aa31LG3G2550 Aethionema arabicum HOM05D006043 ORTHO05D007309 5.7e-30 134.8 151 50.3
BraA05t22694Z Brassica rapa HOM05D006043 ORTHO05D007309 7.4e-30 134.4 151 53.0
BcaC05g29726 Brassica carinata HOM05D006043 ORTHO05D007309 1.3e-29 133.7 154 51.3
Nitab4.5_0001922g0090 Nicotiana tabacum HOM05D006043 ORTHO05D007309 1.3e-29 133.7 123 60.2
C03p43400 Brassica napus HOM05D006043 ORTHO05D007309 1.7e-29 133.3 151 51.7
C05p58050 Brassica napus HOM05D002004 ORTHO05D002089 1.7e-29 133.3 150 51.3
BolC5t34462H Brassica oleracea HOM05D006043 ORTHO05D007309 1.7e-29 133.3 150 51.3
Carub.0003s0912 Capsella rubella HOM05D006043 ORTHO05D007309 1.7e-29 133.3 151 49.0
PSO384G2483 Papaver somniferum HOM05D006043 ORTHO05D007309 1.7e-29 133.3 166 50.0
BcaC01g04256 Brassica carinata HOM05D006043 ORTHO05D007309 4.8e-29 131.7 151 51.7
Thhalv10021699m.g Eutrema salsugineum HOM05D006043 ORTHO05D007309 4.8e-29 131.7 150 49.3
Nn2g13971 Nelumbo nucifera HOM05D006043 ORTHO05D007309 4.8e-29 131.7 114 60.5
EL10Ac7g17005 Beta vulgaris HOM05D006043 ORTHO05D007309 1.8e-28 129.8 154 51.9
BraA03t12747Z Brassica rapa HOM05D006043 ORTHO05D007309 1.8e-28 129.8 151 51.7
BolC3t16611H Brassica oleracea HOM05D006043 ORTHO05D007309 2.4e-28 129.4 150 50.0
Sopen09g003740 Solanum pennellii HOM05D006043 ORTHO05D007309 4.1e-28 128.6 150 52.0
Aqoxy2G01470 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 5.3e-28 128.3 125 60.8
A03p35730 Brassica napus HOM05D006043 ORTHO05D007309 5.3e-28 128.3 147 52.4
THA.LOC104816380 Tarenaya hassleriana HOM05D006043 ORTHO05D007309 5.3e-28 128.3 114 57.0
SalBow3G1044 Salvia bowleyana HOM05D006043 ORTHO05D007309 6.9e-28 127.9 153 49.7
Ah.08g211020 Amaranthus hybridus HOM05D006043 ORTHO05D007309 1.2e-27 127.1 155 51.0
DCAR_009167 Daucus carota HOM05D006043 ORTHO05D007309 1.5e-27 126.7 145 50.3
Solyc09g008980.2 Solanum lycopersicum HOM05D006043 ORTHO05D007309 4.5e-27 125.2 150 50.7
BolC8t51238H Brassica oleracea HOM05D006043 ORTHO05D007309 1.7e-26 123.2 135 52.6
HPP92_021571 Vanilla planifolia HOM05D006043 ORTHO05D007309 3.8e-26 122.1 132 53.8
Sopen09g003730 Solanum pennellii HOM05D006043 ORTHO05D007309 6.5e-26 121.3 149 51.7
TWI13G0012 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 6.5e-26 121.3 111 63.1
TWI74G0769 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 6.5e-26 121.3 111 63.1
Solyc09g008970.1 Solanum lycopersicum HOM05D006043 ORTHO05D007309 1.1e-25 120.6 148 51.4
PGSC0003DMG400002723 Solanum tuberosum HOM05D006043 ORTHO05D007309 5.5e-25 118.2 149 50.3
Thecc.05G079900 Theobroma cacao HOM05D006043 ORTHO05D007309 9.4e-25 117.5 158 48.7
Lj2P127T74 Lonicera japonica HOM05D006043 ORTHO05D007309 1.2e-24 117.1 125 55.2
Zm00001eb406490 Zea mays HOM05D006043 ORTHO05D007309 4.7e-24 115.2 134 49.3
ECA126G0006 Erigeron canadensis HOM05D006043 ORTHO05D007309 3.0e-23 112.5 155 43.9
Os12g0147200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 1.1e-22 110.5 133 49.6
Lj4P368T6 Lonicera japonica HOM05D006043 ORTHO05D007309 9.7e-22 107.5 80 70.0
TAR334G0001 Trochodendron aralioides HOM05D006043 ORTHO05D007309 2.2e-21 106.3 88 65.9
TAR369G1076 Trochodendron aralioides HOM05D006043 ORTHO05D007309 2.2e-21 106.3 88 65.9
Os11g0149200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 8.2e-21 104.4 138 47.1
Prupe.7G091800 Prunus persica HOM05D006043 ORTHO05D007309 4.1e-20 102.1 91 63.7
C08p36560 Brassica napus HOM05D006043 ORTHO05D007309 1.3e-18 97.1 101 55.4
BcaC03g16179 Brassica carinata HOM05D006043 ORTHO05D007309 9.4e-17 90.9 101 53.5
C02p39530 Brassica napus HOM05D006043 ORTHO05D007309 2.7e-16 89.4 101 52.5
BolC2t09966H Brassica oleracea HOM05D006043 ORTHO05D007309 2.7e-16 89.4 101 52.5
AUR62033593 Chenopodium quinoa HOM05D006043 ORTHO05D007309 8.0e-16 87.8 133 47.4
SEGI_20897 Sequoiadendron giganteum HOM05D006043 ORTHO05D007309 1.8e-15 86.7 104 51.9
THA.LOC104823222 Tarenaya hassleriana HOM05D006043 ORTHO05D007309 1.1e-14 84.0 76 55.3
Nn1g08859 Nelumbo nucifera HOM05D006043 ORTHO05D007309 5.9e-11 71.6 64 64.1
AUR62037886 Chenopodium quinoa HOM05D006043 ORTHO05D007309 7.7e-11 71.2 66 57.6
SMO347G0034 Selaginella moellendorffii HOM05D006043 ORTHO05D007309 1.5e-09 67.0 122 38.5
Mapoly0058s0037 Marchantia polymorpha HOM05D006043 ORTHO05D007309 8.0e-08 61.2 97 43.3
SMO358G0245 Selaginella moellendorffii HOM05D006043 ORTHO05D007309 5.7e-06 55.1 78 46.2


User provided reference genes

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