Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040931 Camellia sinensis var. sinensis HOM05D007266 ORTHO05D005982 6.3e-134 480.7 232 100.0
Actinidia01687 Actinidia chinensis HOM05D000639 ORTHO05D007519 8.6e-75 284.3 217 65.4
Rhsim01G0124500 Rhododendron simsii HOM05D007266 ORTHO05D005982 6.2e-73 278.1 217 65.0
Actinidia01519 Actinidia chinensis HOM05D007266 ORTHO05D005982 1.8e-72 276.6 217 65.9
vmacro21145 Vaccinium macrocarpon HOM05D007266 ORTHO05D005982 6.2e-65 251.5 219 61.2
Cfa010951 Carpinus fangiana HOM05D007266 ORTHO05D005982 1.4e-37 160.6 221 43.4
Dinv32008 Davidia involucrata HOM05D007266 ORTHO05D005982 2.4e-37 159.8 228 48.2
Haze_02992 Corylus avellana HOM05D007266 ORTHO05D005982 7.1e-37 158.3 218 42.7
Potri.001G031800 Populus trichocarpa HOM05D007266 ORTHO05D005982 4.3e-34 149.1 218 42.7
MD07G1043900 Malus domestica HOM05D007266 ORTHO05D005982 6.2e-33 145.2 233 42.5
Prupe.2G043600 Prunus persica HOM05D007266 ORTHO05D005982 8.2e-33 144.8 201 43.8
Thecc.10G142300 Theobroma cacao HOM05D007266 ORTHO05D005982 8.2e-33 144.8 217 41.0
Sabra01G0022900 Salix brachista HOM05D007266 ORTHO05D005982 2.4e-32 143.3 218 41.7
QL04p021455 Quercus lobata HOM05D007266 ORTHO05D005982 3.1e-32 142.9 220 42.3
QL07p029255 Quercus lobata HOM05D007266 ORTHO05D005982 3.1e-32 142.9 220 42.3
RcHm_v2.0_Chr1g0327331 Rosa chinensis HOM05D007266 ORTHO05D005982 2.0e-31 140.2 220 41.4
FvH4_7g03880 Fragaria vesca HOM05D007266 ORTHO05D005982 4.5e-31 139.0 218 40.4
FAN06G1886 Fragaria x ananassa HOM05D007266 ORTHO05D005982 1.7e-30 137.1 220 40.0
FAN10G1696 Fragaria x ananassa HOM05D007266 ORTHO05D005982 2.9e-30 136.3 221 40.7
TAR369G0213 Trochodendron aralioides HOM05D007266 ORTHO05D005982 2.9e-30 136.3 229 41.5
FAN01G0656 Fragaria x ananassa HOM05D007266 ORTHO05D005982 5.5e-29 132.1 220 39.5
TAR633G1403 Trochodendron aralioides HOM05D007266 ORTHO05D005982 9.3e-29 131.3 194 43.3
FAN03G0408 Fragaria x ananassa HOM05D007266 ORTHO05D005982 3.5e-28 129.4 221 39.4
CiPaw.06G056200 Carya illinoinensis HOM05D007266 ORTHO05D005982 1.9e-26 123.6 201 40.8
Dinv11235 Davidia involucrata HOM05D007266 ORTHO05D005982 2.8e-25 119.8 153 48.4
Manes.11G007700 Manihot esculenta HOM05D007266 ORTHO05D005982 2.8e-25 119.8 219 38.8
CiPaw.14G009500 Carya illinoinensis HOM05D007266 ORTHO05D005982 3.7e-25 119.4 221 36.7
Manes.04G156300 Manihot esculenta HOM05D007266 ORTHO05D005982 6.3e-25 118.6 223 37.7
Atru.chr12.1311 Acer truncatum HOM05D007266 ORTHO05D005982 1.1e-24 117.9 202 41.6
COL.COLO4_06637 Corchorus olitorius HOM05D007266 ORTHO05D005982 1.2e-23 114.4 216 35.6
Sabra03G0144500 Salix brachista HOM05D007266 ORTHO05D005982 3.4e-23 112.8 229 35.4
TWI63G1068 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 7.6e-23 111.7 194 38.1
TWI15G1169 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 1.3e-22 110.9 194 36.1
Eucgr.J00068 Eucalyptus grandis HOM05D007266 ORTHO05D005982 8.5e-22 108.2 194 38.7
Duzib128G0414 Durio zibethinus HOM05D007266 ORTHO05D005982 1.1e-21 107.8 173 40.5
Gohir.A05G283500 Gossypium hirsutum HOM05D007266 ORTHO05D005982 1.2e-20 104.4 163 41.1
Lsat_1_v5_gn_1_118261 Lactuca sativa HOM05D007266 ORTHO05D005982 2.7e-20 103.2 207 38.6
Gorai.009G299100 Gossypium raimondii HOM05D007266 ORTHO05D005982 3.6e-20 102.8 162 40.1
Nn7g36823 Nelumbo nucifera HOM05D007266 ORTHO05D005982 1.8e-19 100.5 200 36.0
ECA248G2125 Erigeron canadensis HOM05D007266 ORTHO05D005982 5.1e-19 99.0 207 37.7
HanXRQChr05g0146291 Helianthus annuus HOM05D007266 ORTHO05D005982 8.8e-19 98.2 207 35.7
Hma1.2p1_0837F.1_g226230 Hydrangea macrophylla HOM05D007266 ORTHO05D005982 1.5e-18 97.4 193 36.8
Oeu013066.1 Olea europaea HOM05D007266 ORTHO05D005982 9.7e-18 94.7 193 34.7
Hund13391 Selenicereus undatus HOM05D007266 ORTHO05D005982 3.7e-17 92.8 172 37.2
Nitab4.5_0002838g0050 Nicotiana tabacum HOM05D007266 ORTHO05D005982 1.4e-16 90.9 204 35.8
Actinidia01518 Actinidia chinensis HOM05D007266 ORTHO05D005982 2.4e-16 90.1 87 56.3
Oeu058685.1 Olea europaea HOM05D007266 ORTHO05D005982 3.1e-16 89.7 188 31.9
Peaxi162Scf00220g00314 Petunia axillaris HOM05D007266 ORTHO05D005982 2.0e-15 87.0 221 30.3
Medtr8g040640 Medicago truncatula HOM05D007266 ORTHO05D005982 7.7e-15 85.1 150 36.7
Sc11g0006320 Simmondsia chinensis HOM05D007266 ORTHO05D005982 1.0e-14 84.7 221 29.4
Glyma.04G133400 Glycine max HOM05D007266 ORTHO05D005982 1.3e-14 84.3 156 32.7
TAR623G0101 Trochodendron aralioides HOM05D007266 ORTHO05D005982 3.8e-14 82.8 134 41.8
Ca_24011_v3 Cicer arietinum L. HOM05D007266 ORTHO05D005982 5.0e-14 82.4 149 34.9
Ca_24018_v3 Cicer arietinum L. HOM05D007266 ORTHO05D005982 5.0e-14 82.4 149 34.9
GSVIVG01036604001 Vitis vinifera HOM05D007266 ORTHO05D005982 1.4e-13 80.9 98 45.9
Solyc01g096620.4 Solanum lycopersicum HOM05D007266 ORTHO05D005982 4.2e-13 79.3 215 31.6
CAN.G134.28 Capsicum annuum HOM05D005009 ORTHO05D006203 7.2e-13 78.6 199 31.7
Nitab4.5_0004168g0140 Nicotiana tabacum HOM05D007266 ORTHO05D005982 7.2e-13 78.6 194 35.1
Glyma.13G191900 Glycine max HOM05D007266 ORTHO05D005982 2.1e-12 77.0 149 37.6
Glyma.15G229400 Glycine max HOM05D007266 ORTHO05D005982 2.7e-12 76.6 145 37.2
Lj3g0024959 Lotus japonicus HOM05D007266 ORTHO05D005982 6.1e-12 75.5 148 33.8
Sopen01g040350 Solanum pennellii HOM05D007266 ORTHO05D005982 6.1e-12 75.5 203 32.0
DCAR_029711 Daucus carota HOM05D007266 ORTHO05D005982 1.0e-11 74.7 151 35.8
Lalb_Chr01g0007421 Lupinus albus HOM05D007266 ORTHO05D005982 2.3e-11 73.6 127 37.0
VMungo1080G1603 Vigna mungo HOM05D007266 ORTHO05D005982 3.9e-11 72.8 158 31.0
PGSC0003DMG402003286 Solanum tuberosum HOM05D007266 ORTHO05D005982 5.1e-11 72.4 197 32.0
arahy.Tifrunner.gnm1.ann1.E0LNSJ Arachis hypogaea HOM05D007266 ORTHO05D005982 2.0e-10 70.5 156 30.8
PGR044G2654 Punica granatum HOM05D007266 ORTHO05D005982 2.0e-10 70.5 201 32.3
Lj9C658G11 Lonicera japonica HOM05D007266 ORTHO05D005982 5.7e-10 68.9 76 47.4
arahy.Tifrunner.gnm1.ann1.5HCQ47 Arachis hypogaea HOM05D007266 ORTHO05D005982 9.7e-10 68.2 166 29.5
Phvul.011G200200 Phaseolus vulgaris HOM05D007266 ORTHO05D005982 9.7e-10 68.2 149 32.9
TWI38G2050 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 9.7e-10 68.2 194 30.4
EL10Ac2g02761 Beta vulgaris HOM05D007266 ORTHO05D005982 2.2e-09 67.0 222 30.6
AUR62031740 Chenopodium quinoa HOM05D007266 ORTHO05D005982 4.8e-09 65.9 150 36.0
Migut.B01189 Erythranthe guttata HOM05D007266 ORTHO05D005982 5.3e-08 62.4 146 29.5
Phvul.005G018800 Phaseolus vulgaris HOM05D007266 ORTHO05D005982 7.0e-08 62.0 145 29.0
Lalb_Chr19g0132921 Lupinus albus HOM05D007266 ORTHO05D005982 3.4e-07 59.7 131 31.3
Sp6g35890 Schrenkiella parvula HOM05D008873 ORTHO05D005982 6.5e-06 55.5 156 29.5


User provided reference genes

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