Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040909 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 4.2e-89 331.3 158 100.0
CSS0002961 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 6.1e-72 274.2 151 89.4
Duzib205G0920 Durio zibethinus HOM05D007031 ORTHO05D008815 1.3e-61 240.0 147 78.9
Dinv21635 Davidia involucrata HOM05D007031 ORTHO05D008815 3.7e-61 238.4 140 82.9
THA.LOC104815489 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 1.1e-60 236.9 149 77.2
Solyc08g007380.4 Solanum lycopersicum HOM05D007031 ORTHO05D008815 4.1e-60 235.0 162 72.2
TAR636G3191 Trochodendron aralioides HOM05D007031 ORTHO05D008815 5.3e-60 234.6 147 78.2
Actinidia14432 Actinidia chinensis HOM05D007031 ORTHO05D008815 9.1e-60 233.8 153 76.5
Gohir.D08G188900 Gossypium hirsutum HOM05D007031 ORTHO05D008815 5.9e-59 231.1 148 75.7
Gorai.004G199000 Gossypium raimondii HOM05D007031 ORTHO05D008815 5.9e-59 231.1 148 75.7
CiPaw.12G109600 Carya illinoinensis HOM05D007031 ORTHO05D008815 7.7e-59 230.7 152 73.7
MSTRG.13772 Avicennia marina HOM05D007031 ORTHO05D008815 1.0e-58 230.3 147 74.8
Carub.0007s2484 Capsella rubella HOM05D007031 ORTHO05D008815 1.3e-58 229.9 145 75.9
Ciclev10022693m.g Citrus clementina HOM05D007031 ORTHO05D008815 1.7e-58 229.6 150 74.7
Sopen08g003330 Solanum pennellii HOM05D007031 ORTHO05D008815 1.7e-58 229.6 152 74.3
TPR.G25905 Trifolium pratense HOM05D007031 ORTHO05D008815 3.8e-58 228.4 146 78.1
PSO386G0128 Papaver somniferum HOM05D007031 ORTHO05D008815 5.0e-58 228.0 143 74.1
Cfa012711 Carpinus fangiana HOM05D007031 ORTHO05D008815 8.5e-58 227.3 154 74.7
Lalb_Chr09g0324411 Lupinus albus HOM05D007031 ORTHO05D008815 1.5e-57 226.5 153 75.2
Phvul.002G062701 Phaseolus vulgaris HOM05D007031 ORTHO05D008815 1.9e-57 226.1 144 76.4
Lj2A217G30 Lonicera japonica HOM05D007031 ORTHO05D008815 2.5e-57 225.7 144 75.7
CAN.G1227.14 Capsicum annuum HOM05D007031 ORTHO05D008815 3.2e-57 225.3 150 73.3
Lj2g0002187 Lotus japonicus HOM05D007031 ORTHO05D008815 3.2e-57 225.3 150 76.0
Lsat_1_v5_gn_5_187960 Lactuca sativa HOM05D007031 ORTHO05D008815 4.2e-57 224.9 144 77.1
BcaC09g50373 Brassica carinata HOM05D007031 ORTHO05D008815 5.5e-57 224.6 149 72.5
FAN18G3883 Fragaria x ananassa HOM05D007031 ORTHO05D008815 7.2e-57 224.2 147 75.5
Glyma.11G032300 Glycine max HOM05D007031 ORTHO05D008815 9.4e-57 223.8 150 76.0
RcHm_v2.0_Chr7g0203161 Rosa chinensis HOM05D007031 ORTHO05D008815 9.4e-57 223.8 147 76.2
FvH4_5g18810 Fragaria vesca HOM05D007031 ORTHO05D008815 2.1e-56 222.6 144 76.4
Potri.003G076400 Populus trichocarpa HOM05D007031 ORTHO05D008815 2.1e-56 222.6 140 77.1
FAN08G1843 Fragaria x ananassa HOM05D007031 ORTHO05D008815 3.6e-56 221.9 147 74.1
FAN13G0327 Fragaria x ananassa HOM05D007031 ORTHO05D008815 3.6e-56 221.9 147 74.8
TWI60G0154 Tripterygium wilfordii HOM05D007031 ORTHO05D008815 3.6e-56 221.9 143 74.8
Cc08_g12500 Coffea canephora HOM05D007031 ORTHO05D008815 4.7e-56 221.5 148 71.6
Eucgr.E00427 Eucalyptus grandis HOM05D007031 ORTHO05D008815 4.7e-56 221.5 142 75.4
ECA232G3888 Erigeron canadensis HOM05D007031 ORTHO05D008815 6.1e-56 221.1 141 75.2
Thhalv10026497m.g Eutrema salsugineum HOM05D007031 ORTHO05D008815 6.1e-56 221.1 148 70.9
BcaNung00171 Brassica carinata HOM05D007031 ORTHO05D008815 8.0e-56 220.7 149 72.5
PSO724G0679 Papaver somniferum HOM05D007031 ORTHO05D008815 1.4e-55 219.9 138 73.2
Aa31LG2G12690 Aethionema arabicum HOM05D007031 ORTHO05D008815 2.3e-55 219.2 147 69.4
CARHR223050 Cardamine hirsuta HOM05D007031 ORTHO05D008815 3.0e-55 218.8 142 71.1
Aqoxy5G01014 Aquilegia oxysepala HOM05D007031 ORTHO05D008815 4.0e-55 218.4 143 74.8
BolC1t02559H Brassica oleracea HOM05D007031 ORTHO05D008815 5.2e-55 218.0 148 71.6
AT4G16566 Arabidopsis thaliana HOM05D007031 ORTHO05D008815 6.7e-55 217.6 142 71.8
Gohir.A08G170700 Gossypium hirsutum HOM05D007031 ORTHO05D008815 1.1e-54 216.9 152 73.7
BraA01t02001Z Brassica rapa HOM05D007031 ORTHO05D008815 1.5e-54 216.5 144 72.2
AL7G38260 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 2.6e-54 215.7 142 71.1
DCAR_027778 Daucus carota HOM05D007031 ORTHO05D008815 4.4e-54 214.9 152 67.8
arahy.Tifrunner.gnm1.ann1.R85P7C Arachis hypogaea HOM05D007031 ORTHO05D008815 5.7e-54 214.5 143 72.7
Migut.E00966 Erythranthe guttata HOM05D007031 ORTHO05D008815 5.7e-54 214.5 139 71.9
Psat2g177560 Pisum sativum HOM05D007031 ORTHO05D008815 5.7e-54 214.5 153 69.9
CSS0026472 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 7.5e-54 214.2 148 73.6
Migut.E01683 Erythranthe guttata HOM05D007031 ORTHO05D008815 7.5e-54 214.2 139 71.9
Sed0003740 Sechium edule HOM05D007031 ORTHO05D008815 7.5e-54 214.2 142 73.9
arahy.Tifrunner.gnm1.ann1.WL6NYT Arachis hypogaea HOM05D007031 ORTHO05D008815 9.7e-54 213.8 143 72.0
CsaV3_5G004200 Cucumis sativus L. HOM05D007031 ORTHO05D008815 2.8e-53 212.2 142 73.2
Hma1.2p1_0316F.1_g123210 Hydrangea macrophylla HOM05D007031 ORTHO05D008815 2.8e-53 212.2 119 83.2
CANSAT21G0077 Cannabis sativa HOM05D007031 ORTHO05D008815 1.1e-52 210.3 144 70.8
HPP92_027426 Vanilla planifolia HOM05D007031 ORTHO05D008815 7.0e-52 207.6 146 68.5
HPP92_021039 Vanilla planifolia HOM05D007031 ORTHO05D008815 1.6e-51 206.5 146 67.8
Atru.chr9.1322 Acer truncatum HOM05D007031 ORTHO05D008815 2.9e-50 202.2 119 79.0
MBI04_g09491_MAGBIO Magnolia biondii HOM05D007031 ORTHO05D008815 5.0e-50 201.4 184 57.1
ClCG01G004020 Citrullus lanatus HOM05D007031 ORTHO05D008815 1.1e-49 200.3 163 62.0
Os04g0535400 Oryza sativa ssp. japonica HOM05D007031 ORTHO05D008815 1.5e-49 199.9 137 67.9
AL7G38210 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 3.2e-49 198.7 121 75.2
CDE09G0628 Ceratophyllum demersum HOM05D005321 ORTHO05D006360 9.4e-49 197.2 136 68.4
BcaNung02861 Brassica carinata HOM05D007031 ORTHO05D008815 1.8e-47 193.0 148 65.5
unitig_699.g19776 Utricularia gibba HOM05D007031 ORTHO05D008815 1.8e-47 193.0 133 70.7
Peaxi162Scf00102g01143 Petunia axillaris HOM05D007031 ORTHO05D008815 3.0e-47 192.2 126 71.4
vmacro16391 Vaccinium macrocarpon HOM05D007031 ORTHO05D008815 5.7e-46 188.0 110 80.0
ATR0317G125 Amborella trichopoda HOM05D007031 ORTHO05D008815 7.5e-46 187.6 137 65.7
SEGI_08804 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 1.3e-45 186.8 137 63.5
MD04G1063700 Malus domestica HOM05D007031 ORTHO05D008815 2.4e-44 182.6 116 76.7
VMungo1215G1202 Vigna mungo HOM05D007031 ORTHO05D008815 3.1e-44 182.2 114 76.3
QL12p012249 Quercus lobata HOM05D007031 ORTHO05D008815 4.1e-44 181.8 259 42.5
EL10Ac5g13074 Beta vulgaris HOM05D007031 ORTHO05D008815 7.7e-43 177.6 174 52.3
Manes.02G039100 Manihot esculenta HOM05D007031 ORTHO05D008815 1.0e-42 177.2 117 75.2
C01p26150 Brassica napus HOM05D007031 ORTHO05D008815 1.3e-42 176.8 123 69.1
FAN14G5160 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.7e-42 176.4 142 60.6
A01p20650 Brassica napus HOM05D007031 ORTHO05D008815 3.8e-42 175.3 123 69.1
MELO3C005535.2 Cucumis melo HOM05D007031 ORTHO05D008815 4.7e-40 168.3 101 77.2
Sabra03G0047000 Salix brachista HOM05D007031 ORTHO05D008815 5.2e-39 164.9 157 54.8
BolC7t45328H Brassica oleracea HOM05D007031 ORTHO05D008815 6.8e-39 164.5 130 65.4
Hund14533 Selenicereus undatus HOM05D007031 ORTHO05D008815 2.0e-38 162.9 101 77.2
Sp7g15180 Schrenkiella parvula HOM05D007031 ORTHO05D008815 5.7e-38 161.4 149 56.4
CiPaw.11G153700 Carya illinoinensis HOM05D007031 ORTHO05D008815 2.2e-37 159.5 112 69.6
AUR62042788 Chenopodium quinoa HOM05D007031 ORTHO05D008815 1.4e-36 156.8 111 66.7
Zm00001eb427450 Zea mays HOM05D007031 ORTHO05D008815 1.6e-35 153.3 101 65.3
Nitab4.5_0000712g0190 Nicotiana tabacum HOM05D007031 ORTHO05D008815 1.0e-34 150.6 166 50.6
Prupe.5G068700 Prunus persica HOM05D007031 ORTHO05D008815 8.6e-34 147.5 150 54.0
AUR62007512 Chenopodium quinoa HOM05D007031 ORTHO05D008815 4.7e-32 141.7 89 71.9
Pp3c5_26880 Physcomitrium patens HOM05D007031 ORTHO05D008815 4.7e-32 141.7 144 47.2
BcaC06g33496 Brassica carinata HOM05D007031 ORTHO05D008815 1.0e-31 140.6 91 72.5
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 1.0e-31 140.6 108 62.0
SMO274G0074 Selaginella moellendorffii HOM05D007031 ORTHO05D008815 1.8e-31 139.8 142 47.9
GSVIVG01001319001 Vitis vinifera HOM05D007031 ORTHO05D008815 2.0e-30 136.3 86 80.2
THA.LOC104815507 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 2.6e-30 136.0 79 77.2
FAN02G0786 Fragaria x ananassa HOM05D007031 ORTHO05D008815 7.5e-30 134.4 104 66.3
Oeu062969.1 Olea europaea HOM05D007031 ORTHO05D008815 1.7e-29 133.3 139 51.8
FAN04G1478 Fragaria x ananassa HOM05D007031 ORTHO05D008815 4.9e-29 131.7 80 77.5
Haze_07923 Corylus avellana HOM05D007031 ORTHO05D008815 1.1e-28 130.6 168 45.8
SMO134G0120 Selaginella moellendorffii HOM05D000076 ORTHO05D001279 1.8e-28 129.8 116 51.7
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 3.2e-28 129.0 113 59.3
Nn6g33971 Nelumbo nucifera HOM05D007031 ORTHO05D008815 2.0e-27 126.3 76 76.3
SalBow6G3941 Salvia bowleyana HOM05D007031 ORTHO05D008815 3.5e-27 125.6 106 58.5
Sc22g0000840 Simmondsia chinensis HOM05D007031 ORTHO05D008815 3.5e-27 125.6 86 70.9
Nitab4.5_0002225g0110 Nicotiana tabacum HOM05D007031 ORTHO05D008815 7.5e-22 107.8 138 50.0
Medtr5g012525 Medicago truncatula HOM05D007031 ORTHO05D008815 2.2e-21 106.3 61 83.6
Pp3c6_3420 Physcomitrium patens HOM05D029721 ORTHO05D008815 2.9e-21 105.9 133 46.6
Thecc.03G252200 Theobroma cacao HOM05D007031 ORTHO05D008815 8.3e-21 104.4 81 64.2
MCO15G691 Micromonas commoda HOM05D007031 ORTHO05D008815 5.4e-20 101.7 121 42.1
Cre03.g169200 Chlamydomonas reinhardtii HOM05D007031 ORTHO05D008815 2.0e-19 99.8 130 42.3
SEGI_18261 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 2.7e-19 99.4 97 53.6
FAN05G5584 Fragaria x ananassa HOM05D007031 ORTHO05D008815 8.9e-15 84.3 59 67.8
COL.COLO4_37184 Corchorus olitorius HOM05D007031 ORTHO05D008815 1.4e-07 60.5 45 71.1
Haze_07922 Corylus avellana HOM05D007031 ORTHO05D008815 1.5e-06 57.0 44 70.5
HanXRQChr17g0549671 Helianthus annuus HOM05D007031 ORTHO05D008815 9.9e-06 54.3 42 61.9


User provided reference genes

Program Settings