Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 1.8e-205 719.2 396 100.0
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 1.3e-166 590.1 381 83.5
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 6.9e-165 584.3 394 82.5
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 4.5e-164 581.6 365 80.3
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 2.2e-163 579.3 390 82.6
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 2.2e-163 579.3 381 81.4
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 8.4e-163 577.4 382 84.6
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 2.4e-162 575.9 383 82.0
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 2.4e-162 575.9 387 80.4
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 2.7e-161 572.4 386 80.6
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 3.0e-160 568.9 384 80.2
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 3.0e-160 568.9 384 80.2
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 6.7e-160 567.8 387 77.8
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 6.7e-160 567.8 377 80.6
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 5.6e-159 564.7 380 79.5
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 7.4e-159 564.3 382 75.4
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 1.3e-158 563.5 382 78.3
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.6e-158 563.1 376 80.1
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 1.6e-158 563.1 381 78.5
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 2.8e-158 562.4 382 74.9
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 4.8e-158 561.6 396 77.0
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 8.1e-158 560.8 378 80.2
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 1.1e-157 560.5 386 73.8
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.8e-157 559.7 374 80.2
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 3.1e-157 558.9 374 80.2
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 3.1e-157 558.9 372 79.8
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 1.2e-156 557.0 378 78.3
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.2e-156 557.0 378 78.3
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 1.5e-156 556.6 377 80.4
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 7.6e-156 554.3 382 75.9
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 9.9e-156 553.9 333 83.8
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.3e-155 553.5 372 79.8
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 3.8e-155 552.0 377 79.6
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 3.8e-155 552.0 382 77.5
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 4.9e-155 551.6 391 75.7
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 1.1e-154 550.4 376 79.0
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 1.4e-154 550.1 387 76.2
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 1.9e-154 549.7 392 72.4
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 2.4e-154 549.3 359 81.1
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 2.4e-154 549.3 384 76.3
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 3.2e-154 548.9 381 76.6
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 5.5e-154 548.1 381 71.9
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 7.1e-154 547.7 370 79.7
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 1.6e-153 546.6 377 78.2
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 1.6e-153 546.6 370 78.1
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 4.6e-153 545.0 389 71.5
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 6.0e-153 544.7 384 76.0
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 6.0e-153 544.7 384 76.0
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 6.0e-153 544.7 378 73.8
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 7.9e-153 544.3 384 76.0
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 2.3e-152 542.7 379 77.6
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 3.0e-152 542.3 396 75.3
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 3.9e-152 542.0 368 79.1
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 8.7e-152 540.8 382 72.0
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 1.1e-151 540.4 364 78.6
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 1.5e-151 540.0 377 71.9
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 1.9e-151 539.7 398 76.9
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 1.9e-151 539.7 392 78.1
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 5.6e-151 538.1 403 73.9
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 7.4e-151 537.7 384 73.7
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 7.4e-151 537.7 373 76.4
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 7.4e-151 537.7 314 83.1
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 9.6e-151 537.3 384 75.3
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 1.6e-150 536.6 399 71.2
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 2.1e-150 536.2 384 71.4
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 2.8e-150 535.8 300 86.0
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 2.8e-150 535.8 384 71.1
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 3.7e-150 535.4 370 77.6
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 3.7e-150 535.4 363 74.4
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 3.7e-150 535.4 308 84.7
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 4.8e-150 535.0 383 76.2
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 4.8e-150 535.0 383 76.2
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 4.8e-150 535.0 362 74.6
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 4.8e-150 535.0 382 71.2
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 8.2e-150 534.3 392 69.9
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 1.4e-149 533.5 383 78.9
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 1.4e-149 533.5 307 84.4
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 2.4e-149 532.7 382 75.7
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 4.0e-149 531.9 307 83.7
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 4.0e-149 531.9 383 75.7
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 4.0e-149 531.9 307 83.4
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 5.3e-149 531.6 328 80.2
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 6.9e-149 531.2 367 72.5
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 9.0e-149 530.8 364 78.6
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 9.0e-149 530.8 382 75.9
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 2.0e-148 529.6 348 75.6
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 2.0e-148 529.6 381 70.3
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.3e-147 526.9 320 80.9
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 1.3e-147 526.9 392 70.7
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 1.7e-147 526.6 320 80.9
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 1.7e-147 526.6 377 70.6
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 2.2e-147 526.2 310 81.6
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 2.2e-147 526.2 418 65.6
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 2.2e-147 526.2 410 74.6
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.1e-146 523.9 311 82.3
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 1.1e-146 523.9 310 82.3
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 1.4e-146 523.5 375 72.8
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 1.9e-146 523.1 383 77.0
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 1.9e-146 523.1 317 81.7
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 2.5e-146 522.7 365 77.0
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 7.1e-146 521.2 310 80.6
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 7.1e-146 521.2 310 81.6
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 1.2e-145 520.4 379 74.1
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 2.1e-145 519.6 310 81.3
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 2.7e-145 519.2 365 71.2
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 3.5e-145 518.8 383 77.0
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 3.5e-145 518.8 383 77.0
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 1.3e-144 516.9 317 79.2
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 3.0e-144 515.8 364 72.3
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 3.0e-144 515.8 377 72.4
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 1.5e-143 513.5 474 62.0
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 1.5e-143 513.5 377 69.2
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 5.7e-143 511.5 310 80.0
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 1.3e-142 510.4 399 67.7
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 1.6e-142 510.0 298 81.9
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 4.1e-141 505.4 384 76.8
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 1.9e-138 496.5 350 70.6
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 4.2e-138 495.4 376 68.6
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 1.2e-137 493.8 298 79.9
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 4.6e-137 491.9 285 81.8
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 7.9e-137 491.1 309 76.7
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 1.8e-136 490.0 317 76.3
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 6.7e-136 488.0 323 75.5
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 6.7e-136 488.0 382 71.7
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 4.3e-135 485.3 329 74.5
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 8.2e-134 481.1 305 83.0
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 3.4e-132 475.7 344 76.2
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 6.1e-129 464.9 401 62.6
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 2.3e-128 463.0 364 69.2
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 6.7e-128 461.5 324 78.4
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 2.6e-127 459.5 399 65.2
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 9.7e-127 457.6 308 79.5
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 2.2e-126 456.4 286 78.3
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 2.9e-123 446.0 298 70.1
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 3.8e-123 445.7 315 72.1
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 4.2e-122 442.2 311 66.9
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 1.6e-121 440.3 396 61.6
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 1.6e-121 440.3 374 66.3
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 1.7e-118 430.3 297 67.7
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 2.4e-117 426.4 367 61.6
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 4.5e-116 422.2 300 66.0
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 1.3e-115 420.6 298 65.4
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 3.8e-115 419.1 277 74.7
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 2.1e-113 413.3 322 63.4
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 2.7e-113 412.9 392 65.3
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 2.2e-110 403.3 327 60.9
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 1.6e-105 387.1 223 84.3
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 8.0e-105 384.8 443 51.2
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 4.8e-102 375.6 239 77.0
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 1.5e-90 337.4 298 56.0
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 4.0e-88 329.3 210 72.4
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 2.6e-79 300.1 252 66.3
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 3.0e-67 260.0 150 82.0
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 1.7e-62 244.2 314 50.3
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 3.8e-54 216.5 171 60.8
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 7.1e-53 212.2 172 67.4
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 2.8e-41 173.7 164 55.5
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 4.5e-31 139.8 89 78.7
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 1.6e-25 121.3 281 30.6
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 6.3e-25 119.4 101 62.4
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 1.1e-21 108.6 335 27.5
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 4.2e-21 106.7 64 75.0
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 9.4e-21 105.5 298 28.2
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 8.8e-19 99.0 248 33.5
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 2.8e-17 94.0 61 78.7
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 2.8e-17 94.0 61 78.7
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 2.4e-16 90.9 61 77.0
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 5.3e-16 89.7 380 25.0
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 6.9e-16 89.4 59 71.2
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 2.0e-15 87.8 69 68.1
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 1.0e-14 85.5 100 65.0
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 1.6e-12 78.2 90 67.8
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 1.7e-09 68.2 108 34.3
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 1.7e-09 68.2 33 93.9
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 9.1e-08 62.4 35 80.0
Zm00001eb043210 Zea mays HOM05D008270 ORTHO05D010684 1.0e-06 58.9 41 68.3
HanXRQChr05g0141861 Helianthus annuus HOM05D000001 ORTHO05D009862 1.3e-06 58.5 50 62.0
Zm00001eb198340 Zea mays HOM05D003970 ORTHO05D004615 1.7e-06 58.2 41 65.9
Zm00001eb372010 Zea mays HOM05D008270 ORTHO05D010684 2.9e-06 57.4 39 69.2


User provided reference genes

Program Settings