Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040904 Camellia sinensis var. sinensis HOM05D008447 ORTHO05D010638 1.1e-201 706.4 364 100.0
Dinv18105 Davidia involucrata HOM05D008447 ORTHO05D010638 2.3e-146 522.7 408 68.6
Rhsim04G0099000 Rhododendron simsii HOM05D008447 ORTHO05D010638 2.5e-145 519.2 471 62.6
Cfa016881 Carpinus fangiana HOM05D008447 ORTHO05D010638 6.4e-125 451.4 406 59.4
GSVIVG01033352001 Vitis vinifera HOM05D008447 ORTHO05D010638 1.4e-124 450.3 390 62.1
Ciclev10004787m.g Citrus clementina HOM05D008447 ORTHO05D010638 1.6e-123 446.8 403 60.8
TAR369G0905 Trochodendron aralioides HOM05D008447 ORTHO05D010638 7.8e-123 444.5 406 59.9
Atru.chr1.942 Acer truncatum HOM05D008447 ORTHO05D010638 3.9e-122 442.2 410 58.3
COL.COLO4_28736 Corchorus olitorius HOM05D008447 ORTHO05D010638 1.9e-121 439.9 409 58.2
Haze_19941 Corylus avellana HOM05D008447 ORTHO05D010638 5.2e-119 431.8 437 55.4
Nn7g36103 Nelumbo nucifera HOM05D008447 ORTHO05D010638 3.2e-116 422.5 405 55.6
Prupe.7G070400 Prunus persica HOM05D008447 ORTHO05D010638 5.4e-116 421.8 410 56.3
MD12G1063100 Malus domestica HOM05D008447 ORTHO05D010638 1.2e-115 420.6 440 54.1
CANSAT80G0811 Cannabis sativa HOM05D008447 ORTHO05D010638 5.1e-114 415.2 408 55.4
Migut.J01799 Erythranthe guttata HOM05D008447 ORTHO05D010638 3.3e-113 412.5 389 58.1
CANSAT80G2072 Cannabis sativa HOM05D008447 ORTHO05D010638 5.6e-113 411.8 408 54.9
Thecc.05G165700 Theobroma cacao HOM05D008447 ORTHO05D010638 2.1e-112 409.8 408 55.4
Gorai.002G037200 Gossypium raimondii HOM05D008447 ORTHO05D010638 3.6e-112 409.1 414 55.1
PGR004G0530 Punica granatum HOM05D008447 ORTHO05D010638 2.4e-111 406.4 406 55.2
PGSC0003DMG400028389 Solanum tuberosum HOM05D008447 ORTHO05D010638 2.6e-110 402.9 411 55.2
PSO384G3680 Papaver somniferum HOM05D008447 ORTHO05D010638 9.9e-110 401.0 400 53.0
Cpa.g.sc85.118 Carica papaya HOM05D008447 ORTHO05D010638 4.9e-109 398.7 375 57.3
Aqoxy1G00302 Aquilegia oxysepala HOM05D008447 ORTHO05D010638 6.4e-109 398.3 398 54.5
Peaxi162Scf00285g00227 Petunia axillaris HOM05D008447 ORTHO05D010638 2.4e-108 396.4 380 57.4
Sopen05g007620 Solanum pennellii HOM05D008447 ORTHO05D010638 1.2e-107 394.0 411 54.3
Solyc05g012800.1 Solanum lycopersicum HOM05D008447 ORTHO05D010638 6.6e-106 388.3 411 53.0
Actinidia17252 Actinidia chinensis HOM05D008447 ORTHO05D010638 8.1e-104 381.3 308 67.9
Gohir.A01G040200 Gossypium hirsutum HOM05D008447 ORTHO05D010638 1.9e-100 370.2 378 54.2
HPP92_023777 Vanilla planifolia HOM05D008447 ORTHO05D010638 2.1e-99 366.7 399 52.4
Gohir.D01G027950 Gossypium hirsutum HOM05D008447 ORTHO05D010638 1.0e-98 364.4 393 52.7
Nitab4.5_0008022g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 5.7e-89 332.0 400 48.8
MBI01_g36431_MAGBIO Magnolia biondii HOM05D008447 ORTHO05D010638 9.3e-84 314.7 342 52.3
Gohir.D01G027900 Gossypium hirsutum HOM05D008447 ORTHO05D010638 2.7e-83 313.2 308 54.2
Nitab4.5_0000016g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 1.2e-78 297.7 400 46.2
SMO367G0387 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 1.9e-76 290.4 400 42.5
Hma1.2p1_0856F.1_g229060 Hydrangea macrophylla HOM05D008447 ORTHO05D010638 9.4e-76 288.1 269 61.0
AagrBONN_evm.TU.Sc2ySwM_228.434 Anthoceros agrestis HOM05D008447 ORTHO05D010638 2.1e-75 287.0 405 41.2
SMO275G0044 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 2.1e-75 287.0 400 42.0
Pp3c10_15450 Physcomitrium patens HOM05D008447 ORTHO05D010638 2.3e-74 283.5 401 43.4
Mapoly0099s0027 Marchantia polymorpha HOM05D008447 ORTHO05D010638 2.6e-70 270.0 410 39.5
RcHm_v2.0_Chr3g0480711 Rosa chinensis HOM05D008447 ORTHO05D010638 1.6e-51 207.6 158 63.3
PRCOL_00000676 Prasinoderma coloniale HOM05D008447 ORTHO05D010638 1.6e-46 191.0 423 35.5
QL07p022609 Quercus lobata HOM05D008447 ORTHO05D010638 4.7e-43 179.5 141 61.7
QL07p022618 Quercus lobata HOM05D008447 ORTHO05D010638 1.2e-33 148.3 143 58.7
CBR_g675 Chara braunii HOM05D008447 ORTHO05D010638 8.0e-27 125.6 153 41.2
Actinidia17253 Actinidia chinensis HOM05D008447 ORTHO05D010638 2.6e-25 120.6 69 79.7
RcHm_v2.0_Chr3g0480721 Rosa chinensis HOM05D008447 ORTHO05D010638 5.8e-25 119.4 133 56.4
SEGI_40265 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 1.1e-15 88.6 100 42.0
CBR_g671 Chara braunii HOM05D008447 ORTHO05D010638 1.9e-07 61.2 71 45.1
SEGI_06266 Sequoiadendron giganteum HOM05D008447 ORTHO05D384438 7.1e-07 59.3 58 55.2
SEGI_28051 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 2.1e-06 57.8 43 65.1


User provided reference genes

Program Settings