Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018282 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 6.6e-205 718.0 656 100.0
CSS0040898 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 6.6e-205 718.0 656 100.0
CSS0040779 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 9.4e-151 538.1 628 88.2
Actinidia34764 Actinidia chinensis HOM05D007057 ORTHO05D008878 7.1e-66 256.1 617 73.6
CSS0046667 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 5.1e-64 250.0 203 84.7
vmacro06001 Vaccinium macrocarpon HOM05D007057 ORTHO05D008878 2.8e-46 191.0 199 83.9
Dinv04346 Davidia involucrata HOM05D007057 ORTHO05D008878 5.8e-44 183.3 205 78.5
Rhsim03G0265600 Rhododendron simsii HOM05D007057 ORTHO05D008878 2.2e-43 181.4 199 80.9
TWI18G1405 Tripterygium wilfordii HOM05D007057 ORTHO05D008878 3.8e-43 180.6 599 61.4
ClCG03G010890 Citrullus lanatus HOM05D007057 ORTHO05D008878 3.1e-37 161.0 592 59.3
Potri.013G087200 Populus trichocarpa HOM05D007057 ORTHO05D008878 1.2e-36 159.1 203 62.6
Haze_04538 Corylus avellana HOM05D007057 ORTHO05D008878 1.5e-36 158.7 402 74.6
GSVIVG01019130001 Vitis vinifera HOM05D007057 ORTHO05D008878 2.5e-34 151.4 197 62.4
Cfa006273 Carpinus fangiana HOM05D007057 ORTHO05D008878 4.2e-34 150.6 402 72.1
Duzib177G0705 Durio zibethinus HOM05D007057 ORTHO05D008878 2.7e-33 147.9 203 58.1
Manes.08G104600 Manihot esculenta HOM05D007057 ORTHO05D008878 2.7e-33 147.9 204 61.3
DCAR_001923 Daucus carota HOM05D007057 ORTHO05D008878 4.6e-33 147.1 593 62.6
PGSC0003DMG400010523 Solanum tuberosum HOM05D007057 ORTHO05D008878 7.9e-33 146.4 204 71.1
QL01p045590 Quercus lobata HOM05D007057 ORTHO05D008878 1.0e-32 146.0 203 55.2
Sopen04g025560 Solanum pennellii HOM05D007057 ORTHO05D008878 2.3e-32 144.8 204 70.1
Duzib128G1528 Durio zibethinus HOM05D007057 ORTHO05D008878 3.0e-32 144.4 203 60.1
Peaxi162Scf00006g00421 Petunia axillaris HOM05D007057 ORTHO05D008878 3.0e-32 144.4 199 73.4
RcHm_v2.0_Chr3g0448121 Rosa chinensis HOM05D007057 ORTHO05D008878 3.0e-32 144.4 205 55.1
Solyc04g056640.1 Solanum lycopersicum HOM05D007057 ORTHO05D008878 3.9e-32 144.1 204 70.6
Peaxi162Scf00976g00023 Petunia axillaris HOM05D007057 ORTHO05D008878 1.1e-31 142.5 198 73.2
TAR362G1011 Trochodendron aralioides HOM05D007057 ORTHO05D008878 1.1e-31 142.5 201 71.1
Eucgr.H01380 Eucalyptus grandis HOM05D007057 ORTHO05D008878 2.5e-31 141.4 198 58.1
Gohir.D04G026500 Gossypium hirsutum HOM05D007057 ORTHO05D008878 2.5e-31 141.4 203 59.6
TWI75G1373 Tripterygium wilfordii HOM05D007057 ORTHO05D008878 2.5e-31 141.4 204 67.2
Gohir.A05G390700 Gossypium hirsutum HOM05D007057 ORTHO05D008878 3.3e-31 141.0 203 59.1
Ciclev10013603m.g Citrus clementina HOM05D007057 ORTHO05D008878 5.7e-31 140.2 205 59.5
CsaV3_1G044640 Cucumis sativus L. HOM05D007057 ORTHO05D008878 9.7e-31 139.4 202 56.9
MELO3C010073.2 Cucumis melo HOM05D007057 ORTHO05D008878 3.7e-30 137.5 202 56.4
FAN02G0321 Fragaria x ananassa HOM05D007057 ORTHO05D008878 8.2e-30 136.3 205 50.7
CAN.G217.2 Capsicum annuum HOM05D007057 ORTHO05D008878 1.4e-29 135.6 205 68.8
FAN05G1805 Fragaria x ananassa HOM05D007057 ORTHO05D008878 1.8e-29 135.2 205 50.2
Cpa.g.sc123.6 Carica papaya HOM05D007057 ORTHO05D008878 3.1e-29 134.4 204 60.8
FvH4_6g00680 Fragaria vesca HOM05D007057 ORTHO05D008878 4.1e-29 134.0 205 50.2
FAN14G3263 Fragaria x ananassa HOM05D007057 ORTHO05D008878 4.1e-29 134.0 205 50.2
Sed0005007 Sechium edule HOM05D007057 ORTHO05D008878 1.2e-28 132.5 201 53.7
Thecc.05G201600 Theobroma cacao HOM05D007057 ORTHO05D008878 1.2e-28 132.5 201 58.2
Nitab4.5_0000946g0060 Nicotiana tabacum HOM05D007057 ORTHO05D008878 1.5e-28 132.1 204 69.1
Ah.04g158850 Amaranthus hybridus HOM05D007057 ORTHO05D008878 2.0e-28 131.7 197 67.5
Nitab4.5_0001857g0020 Nicotiana tabacum HOM05D007057 ORTHO05D008878 2.0e-28 131.7 204 69.1
MSTRG.8219 Avicennia marina HOM05D007057 ORTHO05D008878 2.6e-28 131.3 205 64.4
AUR62006672 Chenopodium quinoa HOM05D007057 ORTHO05D008878 2.6e-28 131.3 199 66.8
PGR031G0541 Punica granatum HOM05D007057 ORTHO05D008878 2.6e-28 131.3 205 54.6
Cc09_g03450 Coffea canephora HOM05D007057 ORTHO05D008878 4.5e-28 130.6 202 69.3
FAN09G2991 Fragaria x ananassa HOM05D007057 ORTHO05D008878 7.7e-28 129.8 205 47.3
AUR62000330 Chenopodium quinoa HOM05D007057 ORTHO05D008878 1.3e-27 129.0 199 66.3
EL10Ac4g09982 Beta vulgaris HOM05D007057 ORTHO05D008878 1.7e-27 128.6 198 65.7
Prupe.6G359800 Prunus persica HOM05D007057 ORTHO05D008878 2.2e-27 128.3 593 57.3
FAN27G3162 Fragaria x ananassa HOM05D007057 ORTHO05D008878 2.9e-27 127.9 202 50.0
CANSAT54G2802 Cannabis sativa HOM05D007057 ORTHO05D008878 3.8e-27 127.5 200 60.0
FAN28G1564 Fragaria x ananassa HOM05D007057 ORTHO05D008878 3.8e-27 127.5 202 50.0
Gorai.012G029100 Gossypium raimondii HOM05D007057 ORTHO05D008878 1.1e-26 125.9 203 62.6
Atru.chr10.1100 Acer truncatum HOM05D007057 ORTHO05D008878 2.5e-26 124.8 204 57.8
Glyma.09G251800 Glycine max HOM05D007057 ORTHO05D008878 2.5e-26 124.8 203 58.1
Oeu010152.2 Olea europaea HOM05D007057 ORTHO05D008878 3.2e-26 124.4 198 68.7
Glyma.18G240800 Glycine max HOM05D007057 ORTHO05D008878 4.2e-26 124.0 203 58.6
ECA248G3256 Erigeron canadensis HOM05D007057 ORTHO05D008878 7.9e-25 119.8 196 66.3
Lj1g0009704 Lotus japonicus HOM05D007057 ORTHO05D008878 7.9e-25 119.8 510 61.4
VMungo1383G0494 Vigna mungo HOM05D007057 ORTHO05D008878 7.9e-25 119.8 202 58.9
Lalb_Chr03g0038391 Lupinus albus HOM05D007057 ORTHO05D008878 1.8e-24 118.6 202 58.4
Medtr7g079550 Medicago truncatula HOM05D007057 ORTHO05D008878 3.9e-24 117.5 202 56.9
HanXRQChr01g0025821 Helianthus annuus HOM05D007057 ORTHO05D008878 1.1e-23 115.9 198 67.7
Sc16g0010320 Simmondsia chinensis HOM05D007057 ORTHO05D008878 1.1e-23 115.9 200 62.5
Lalb_Chr19g0126731 Lupinus albus HOM05D007057 ORTHO05D008878 2.0e-23 115.2 202 56.4
Aqoxy2G03299 Aquilegia oxysepala HOM05D007057 ORTHO05D008878 8.2e-22 109.8 201 65.7
Migut.L01029 Erythranthe guttata HOM05D007057 ORTHO05D008878 8.2e-22 109.8 205 62.4
MBI08_g39972_MAGBIO Magnolia biondii HOM05D007057 ORTHO05D008878 1.8e-21 108.6 217 62.2
COL.COLO4_27405 Corchorus olitorius HOM05D007057 ORTHO05D008878 3.1e-21 107.8 163 62.0
Nn4g26683 Nelumbo nucifera HOM05D007057 ORTHO05D008878 1.2e-20 105.9 203 64.0
Lsat_1_v5_gn_1_58361 Lactuca sativa HOM05D007057 ORTHO05D008878 7.7e-20 103.2 201 64.2
TPR.G28458 Trifolium pratense HOM05D007057 ORTHO05D008878 7.7e-20 103.2 202 56.9
PSO675G4505 Papaver somniferum HOM05D007057 ORTHO05D008878 5.0e-19 100.5 198 63.1
PSO017G0140 Papaver somniferum HOM05D007057 ORTHO05D008878 1.5e-18 99.0 198 63.1
Carub.0002s1110 Capsella rubella HOM05D007057 ORTHO05D008878 4.2e-18 97.4 205 45.9
AL2G22040 Arabidopsis lyrata HOM05D007057 ORTHO05D008878 2.7e-17 94.7 205 38.0
AT1G65380 Arabidopsis thaliana HOM05D007057 ORTHO05D008878 2.7e-17 94.7 210 39.0
BcaB05g24110 Brassica carinata HOM05D007057 ORTHO05D008878 8.0e-17 93.2 204 45.1
C02p21340 Brassica napus HOM05D007057 ORTHO05D008878 1.8e-16 92.0 206 39.3
Thhalv10018195m.g Eutrema salsugineum HOM05D007057 ORTHO05D008878 2.3e-16 91.7 206 38.3
SGA_v2.0_scaffold71G23872 Striga asiatica HOM05D007057 ORTHO05D008878 3.0e-16 91.3 208 59.6
Aa31LG2G2430 Aethionema arabicum HOM05D007057 ORTHO05D008878 4.0e-16 90.9 207 35.7
BcaC03g14695 Brassica carinata HOM05D007057 ORTHO05D008878 4.0e-16 90.9 206 44.2
BolC2t08271H Brassica oleracea HOM05D007057 ORTHO05D008878 4.0e-16 90.9 206 44.2
A02p13180 Brassica napus HOM05D007057 ORTHO05D008878 5.2e-16 90.5 206 43.2
CiPaw.07G078900 Carya illinoinensis HOM05D007057 ORTHO05D008878 5.2e-16 90.5 82 57.3
BraA02t06374Z Brassica rapa HOM05D007057 ORTHO05D008878 1.1e-15 89.4 206 43.7
THA.LOC104823816 Tarenaya hassleriana HOM05D007057 ORTHO05D008878 1.5e-15 89.0 172 41.9
CARHR057050 Cardamine hirsuta HOM05D007057 ORTHO05D008878 9.7e-15 86.3 204 38.2
Sp5g20120 Schrenkiella parvula HOM05D007057 ORTHO05D008878 3.7e-14 84.3 206 47.1
Ca_07967_v3 Cicer arietinum L. HOM05D007057 ORTHO05D008878 4.5e-12 77.4 82 54.9
Psat3g104800 Pisum sativum HOM05D007057 ORTHO05D008878 4.5e-12 77.4 82 53.7
FAN26G2527 Fragaria x ananassa HOM05D007057 ORTHO05D008878 1.7e-11 75.5 76 51.3
AUR62000327 Chenopodium quinoa HOM05D007057 ORTHO05D008878 2.5e-10 71.6 80 52.5
HPP92_021394 Vanilla planifolia HOM05D007057 ORTHO05D008878 2.7e-09 68.2 206 45.6
Os02g0603100 Oryza sativa ssp. japonica HOM05D007057 ORTHO05D008878 7.5e-07 60.1 170 61.8
vmacro09435 Vaccinium macrocarpon HOM05D000053 ORTHO05D000035 3.7e-06 57.8 94 37.2
AT3G11080 Arabidopsis thaliana HOM05D000053 ORTHO05D000035 4.8e-06 57.4 122 31.1
CARHR253280 Cardamine hirsuta HOM05D004673 ORTHO05D005596 6.3e-06 57.0 73 42.5
AT3G05650 Arabidopsis thaliana HOM05D000053 ORTHO05D000035 8.3e-06 56.6 121 32.2


User provided reference genes

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