Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040864 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 4.0e-84 314.7 155 100.0
CSS0012709 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 1.9e-73 279.3 140 99.3
Dinv34837 Davidia involucrata HOM05D003845 ORTHO05D004161 3.4e-67 258.5 140 90.0
vmacro05567 Vaccinium macrocarpon HOM05D003845 ORTHO05D004161 3.4e-67 258.5 148 87.2
Dinv33933 Davidia involucrata HOM05D003845 ORTHO05D004161 2.4e-65 252.3 152 82.2
Hma1.2p1_0136F.1_g062180 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 4.1e-65 251.5 152 80.9
TAR629G0674 Trochodendron aralioides HOM05D003845 ORTHO05D004161 1.6e-64 249.6 148 82.4
CANSAT64G2814 Cannabis sativa HOM05D003845 ORTHO05D004161 2.1e-64 249.2 148 83.1
Ciclev10010942m.g Citrus clementina HOM05D003845 ORTHO05D004161 4.6e-64 248.1 140 88.6
Prupe.7G002300 Prunus persica HOM05D003845 ORTHO05D004161 1.7e-63 246.1 139 86.3
Manes.02G067500 Manihot esculenta HOM05D003845 ORTHO05D004161 3.0e-63 245.4 148 82.4
Actinidia36313 Actinidia chinensis HOM05D003845 ORTHO05D004161 1.1e-62 243.4 131 91.6
CiPaw.04G040900 Carya illinoinensis HOM05D003845 ORTHO05D004161 1.1e-62 243.4 152 77.6
Potri.004G101250 Populus trichocarpa HOM05D003845 ORTHO05D004161 1.9e-62 242.7 152 78.3
Thecc.04G136100 Theobroma cacao HOM05D003845 ORTHO05D004161 1.9e-62 242.7 152 77.0
Atru.chr8.887 Acer truncatum HOM05D003845 ORTHO05D004161 3.3e-62 241.9 148 79.7
TWI53G0876 Tripterygium wilfordii HOM05D003845 ORTHO05D004161 4.3e-62 241.5 150 78.7
RcHm_v2.0_Chr2g0162941 Rosa chinensis HOM05D003845 ORTHO05D004161 7.3e-62 240.7 152 78.9
MD14G1001900 Malus domestica HOM05D003845 ORTHO05D004161 1.2e-61 240.0 147 81.6
MD12G1002400 Malus domestica HOM05D003845 ORTHO05D004161 2.1e-61 239.2 147 81.6
Nn4g23790 Nelumbo nucifera HOM05D003845 ORTHO05D004161 2.8e-61 238.8 152 76.3
FAN02G2813 Fragaria x ananassa HOM05D003845 ORTHO05D004161 1.1e-60 236.9 152 77.6
Duzib133G1200 Durio zibethinus HOM05D003845 ORTHO05D004161 1.4e-60 236.5 137 83.9
HanXRQChr14g0438731 Helianthus annuus HOM05D003845 ORTHO05D004161 1.4e-60 236.5 148 79.7
Lsat_1_v5_gn_4_153700 Lactuca sativa HOM05D003845 ORTHO05D004161 2.3e-60 235.7 148 80.4
FvH4_6g45230 Fragaria vesca HOM05D003845 ORTHO05D004161 3.1e-60 235.3 152 77.0
FAN14G4373 Fragaria x ananassa HOM05D003845 ORTHO05D004161 3.1e-60 235.3 152 77.0
Gohir.A07G071701 Gossypium hirsutum HOM05D003845 ORTHO05D004161 4.0e-60 235.0 152 75.0
Gohir.D07G076100 Gossypium hirsutum HOM05D003845 ORTHO05D004161 4.0e-60 235.0 148 77.7
Gorai.001G080300 Gossypium raimondii HOM05D003845 ORTHO05D004161 4.0e-60 235.0 148 77.7
Medtr7g406950 Medicago truncatula HOM05D003845 ORTHO05D004161 5.2e-60 234.6 152 75.7
CsaV3_5G039200 Cucumis sativus L. HOM05D003845 ORTHO05D004161 1.5e-59 233.0 152 77.6
Nitab4.5_0001569g0050 Nicotiana tabacum HOM05D003845 ORTHO05D004161 1.5e-59 233.0 152 77.6
ECA232G1957 Erigeron canadensis HOM05D003845 ORTHO05D004161 2.6e-59 232.3 148 77.7
THA.LOC104805559 Tarenaya hassleriana HOM05D003845 ORTHO05D004161 2.6e-59 232.3 152 74.3
Psat3g206280 Pisum sativum HOM05D003845 ORTHO05D004161 3.4e-59 231.9 152 75.0
MELO3C022095.2 Cucumis melo HOM05D003845 ORTHO05D004161 4.4e-59 231.5 152 76.3
GSVIVG01031064001 Vitis vinifera HOM05D003845 ORTHO05D004161 5.8e-59 231.1 148 77.0
Aa31LG2G3530 Aethionema arabicum HOM05D003845 ORTHO05D004161 9.9e-59 230.3 152 73.7
Sed0012635 Sechium edule HOM05D003845 ORTHO05D004161 1.7e-58 229.6 152 77.0
Solyc02g085810.3 Solanum lycopersicum HOM05D003845 ORTHO05D004161 1.7e-58 229.6 148 78.4
Sopen02g030490 Solanum pennellii HOM05D003845 ORTHO05D004161 1.7e-58 229.6 148 78.4
Oeu052985.1 Olea europaea HOM05D003845 ORTHO05D004161 2.9e-58 228.8 148 78.4
AL2G25520 Arabidopsis lyrata HOM05D003845 ORTHO05D004161 3.7e-58 228.4 150 74.7
Cc07_g08900 Coffea canephora HOM05D003845 ORTHO05D004161 3.7e-58 228.4 137 83.2
Nitab4.5_0002288g0020 Nicotiana tabacum HOM05D003845 ORTHO05D004161 3.7e-58 228.4 152 76.3
QL02p051715 Quercus lobata HOM05D003845 ORTHO05D004161 3.7e-58 228.4 198 63.6
PSO063G7466 Papaver somniferum HOM05D003845 ORTHO05D004161 4.9e-58 228.0 148 73.6
Eucgr.F02484 Eucalyptus grandis HOM05D003845 ORTHO05D004161 6.4e-58 227.6 148 75.7
Phvul.008G004700 Phaseolus vulgaris HOM05D003845 ORTHO05D004161 6.4e-58 227.6 152 74.3
Glyma.18G297900 Glycine max HOM05D003845 ORTHO05D004161 8.3e-58 227.3 148 75.7
AT1G67140 Arabidopsis thaliana HOM05D003845 ORTHO05D004161 1.1e-57 226.9 150 73.3
A07p33800 Brassica napus HOM05D003845 ORTHO05D004161 1.1e-57 226.9 150 73.3
BraA07t31006Z Brassica rapa HOM05D003845 ORTHO05D004161 1.1e-57 226.9 150 73.3
CAN.G625.4 Capsicum annuum HOM05D003845 ORTHO05D004161 1.1e-57 226.9 152 76.3
VMungo1383G2489 Vigna mungo HOM05D003845 ORTHO05D004161 1.1e-57 226.9 152 74.3
BcaB03g15908 Brassica carinata HOM05D003845 ORTHO05D004161 1.9e-57 226.1 133 81.2
C06p43130 Brassica napus HOM05D003845 ORTHO05D004161 1.9e-57 226.1 152 72.4
BolC6t39126H Brassica oleracea HOM05D003845 ORTHO05D004161 1.9e-57 226.1 152 72.4
Lj2C445G6 Lonicera japonica HOM05D003845 ORTHO05D004161 1.9e-57 226.1 194 63.4
Thhalv10017993m.g Eutrema salsugineum HOM05D003845 ORTHO05D004161 2.4e-57 225.7 152 72.4
PGR004G1392 Punica granatum HOM05D003845 ORTHO05D004161 4.1e-57 224.9 133 82.7
Carub.0002s1343 Capsella rubella HOM05D003845 ORTHO05D004161 5.4e-57 224.6 140 78.6
SalBow3G0178 Salvia bowleyana HOM05D003845 ORTHO05D004161 7.1e-57 224.2 148 76.4
CARHR059600 Cardamine hirsuta HOM05D003845 ORTHO05D004161 9.2e-57 223.8 150 72.7
Aqoxy3G03940 Aquilegia oxysepala HOM05D003845 ORTHO05D004161 1.2e-56 223.4 148 73.0
ClCG11G005440 Citrullus lanatus HOM05D003845 ORTHO05D004161 1.2e-56 223.4 173 68.8
Migut.H00208 Erythranthe guttata HOM05D003845 ORTHO05D004161 1.2e-56 223.4 148 76.4
Lj1g0009000 Lotus japonicus HOM05D003845 ORTHO05D004161 1.6e-56 223.0 152 71.1
Lj1g0022983 Lotus japonicus HOM05D003845 ORTHO05D004161 1.6e-56 223.0 152 71.1
AUR62008978 Chenopodium quinoa HOM05D003845 ORTHO05D004161 2.1e-56 222.6 140 79.3
Sc23g0006880 Simmondsia chinensis HOM05D003845 ORTHO05D004161 2.1e-56 222.6 135 79.3
Lalb_Chr21g0317871 Lupinus albus HOM05D003845 ORTHO05D004161 4.6e-56 221.5 152 73.7
Sp5g22090 Schrenkiella parvula HOM05D003845 ORTHO05D004161 4.6e-56 221.5 132 81.1
arahy.Tifrunner.gnm1.ann1.4V7WUF Arachis hypogaea HOM05D003845 ORTHO05D004161 1.3e-55 219.9 152 69.7
arahy.Tifrunner.gnm1.ann1.UJVA95 Arachis hypogaea HOM05D003845 ORTHO05D004161 1.3e-55 219.9 152 69.7
Hund16135 Selenicereus undatus HOM05D003845 ORTHO05D004161 6.6e-55 217.6 140 78.6
Ah.10g037590 Amaranthus hybridus HOM05D003845 ORTHO05D004161 1.1e-54 216.9 140 77.9
AUR62014525 Chenopodium quinoa HOM05D003845 ORTHO05D004161 4.3e-54 214.9 172 68.0
Peaxi162Scf00814g00242 Petunia axillaris HOM05D003845 ORTHO05D004161 7.3e-54 214.2 180 65.0
ATR0564G046 Amborella trichopoda HOM05D003845 ORTHO05D004161 2.8e-53 212.2 135 74.1
SEGI_31548 Sequoiadendron giganteum HOM05D003845 ORTHO05D004161 7.6e-51 204.1 133 72.9
unitig_899.g14511 Utricularia gibba HOM05D003845 ORTHO05D004161 2.1e-48 196.1 130 73.8
SHI17842 Sapria himalayana HOM05D003845 ORTHO05D004161 7.8e-48 194.1 148 62.8
CDE02G0049 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 1.0e-47 193.7 141 66.0
EL10Ac2g04592 Beta vulgaris HOM05D003845 ORTHO05D004161 1.3e-47 193.4 140 70.7
HPP92_003934 Vanilla planifolia HOM05D003845 ORTHO05D004161 1.1e-46 190.3 132 72.7
Zm00001eb382690 Zea mays HOM05D003845 ORTHO05D004161 1.6e-45 186.4 132 66.7
SGA_v2.0_scaffold33G13453 Striga asiatica HOM05D003845 ORTHO05D004161 4.6e-40 168.3 148 60.8
Pp3c15_3000 Physcomitrium patens HOM05D003845 ORTHO05D004161 3.0e-39 165.6 133 57.9
Ca_04077_v3 Cicer arietinum L. HOM05D003845 ORTHO05D004161 1.1e-38 163.7 110 75.5
COL.COLO4_05467 Corchorus olitorius HOM05D003845 ORTHO05D004161 4.0e-36 155.2 105 73.3
DCAR_017205 Daucus carota HOM05D003845 ORTHO05D004161 4.0e-36 155.2 89 85.4
Mapoly0101s0033 Marchantia polymorpha HOM05D003845 ORTHO05D004161 4.0e-36 155.2 131 55.0
SMO239G0031 Selaginella moellendorffii HOM05D003845 ORTHO05D004161 9.9e-35 150.6 132 54.5
AagrBONN_evm.TU.Sc2ySwM_368.2329__2330 Anthoceros agrestis HOM05D003845 ORTHO05D004161 4.2e-33 145.2 130 51.5
Cpa.g.sc179.5 Carica papaya HOM05D003845 ORTHO05D004161 3.1e-28 129.0 75 84.0
CBR_g31193 Chara braunii HOM05D003845 ORTHO05D004161 1.0e-23 114.0 137 40.9
SEGI_32880 Sequoiadendron giganteum HOM05D003845 ORTHO05D004161 5.1e-23 111.7 75 70.7
Cre16.g684100 Chlamydomonas reinhardtii HOM05D003845 ORTHO05D004161 4.3e-14 82.0 175 30.9
Cpa.g.sc179.6 Carica papaya HOM05D003845 ORTHO05D004161 3.7e-13 79.0 57 68.4
PRCOL_00002157 Prasinoderma coloniale HOM05D003845 ORTHO05D004161 1.2e-11 73.9 157 31.8
Cfa024622 Carpinus fangiana HOM05D003845 ORTHO05D004161 1.4e-09 67.0 109 33.0
MCO14G535 Micromonas commoda HOM05D003845 ORTHO05D004161 1.0e-07 60.8 137 29.9


User provided reference genes

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