Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040779 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 3.1e-221 772.3 683 100.0
CSS0018282 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 9.7e-151 538.1 628 88.2
CSS0040898 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 9.7e-151 538.1 628 88.2
CSS0046667 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 1.4e-64 251.9 203 85.2
Actinidia34764 Actinidia chinensis HOM05D007057 ORTHO05D008878 6.9e-64 249.6 542 77.5
vmacro06001 Vaccinium macrocarpon HOM05D007057 ORTHO05D008878 2.0e-50 204.9 589 69.8
Rhsim03G0265600 Rhododendron simsii HOM05D007057 ORTHO05D008878 1.4e-45 188.7 588 71.3
Dinv04346 Davidia involucrata HOM05D007057 ORTHO05D008878 2.3e-43 181.4 545 68.6
TWI18G1405 Tripterygium wilfordii HOM05D007057 ORTHO05D008878 1.4e-40 172.2 602 60.0
Cfa006273 Carpinus fangiana HOM05D007057 ORTHO05D008878 9.1e-40 169.5 402 74.1
GSVIVG01019130001 Vitis vinifera HOM05D007057 ORTHO05D008878 7.2e-37 159.8 586 63.8
Haze_04538 Corylus avellana HOM05D007057 ORTHO05D008878 6.1e-36 156.8 402 72.1
ClCG03G010890 Citrullus lanatus HOM05D007057 ORTHO05D008878 5.2e-35 153.7 592 57.8
FAN14G3263 Fragaria x ananassa HOM05D007057 ORTHO05D008878 5.7e-34 150.2 550 60.0
TAR362G1011 Trochodendron aralioides HOM05D007057 ORTHO05D008878 9.7e-34 149.4 546 63.4
CANSAT54G2802 Cannabis sativa HOM05D007057 ORTHO05D008878 2.2e-33 148.3 591 65.1
Manes.08G104600 Manihot esculenta HOM05D007057 ORTHO05D008878 3.7e-33 147.5 402 72.4
Potri.013G087200 Populus trichocarpa HOM05D007057 ORTHO05D008878 3.7e-33 147.5 221 57.5
FvH4_6g00680 Fragaria vesca HOM05D007057 ORTHO05D008878 8.3e-33 146.4 554 58.3
FAN09G2991 Fragaria x ananassa HOM05D007057 ORTHO05D008878 1.1e-32 146.0 550 58.9
CsaV3_1G044640 Cucumis sativus L. HOM05D007057 ORTHO05D008878 5.3e-32 143.7 552 59.8
Eucgr.H01380 Eucalyptus grandis HOM05D007057 ORTHO05D008878 5.3e-32 143.7 540 64.6
FAN02G0321 Fragaria x ananassa HOM05D007057 ORTHO05D008878 5.3e-32 143.7 550 56.5
FAN05G1805 Fragaria x ananassa HOM05D007057 ORTHO05D008878 3.5e-31 141.0 551 57.0
MELO3C010073.2 Cucumis melo HOM05D007057 ORTHO05D008878 5.9e-31 140.2 552 59.8
QL01p045590 Quercus lobata HOM05D007057 ORTHO05D008878 7.7e-31 139.8 203 54.2
Duzib128G1528 Durio zibethinus HOM05D007057 ORTHO05D008878 1.0e-30 139.4 552 64.1
Lj1g0009704 Lotus japonicus HOM05D007057 ORTHO05D008878 3.8e-30 137.5 521 60.1
Glyma.18G240800 Glycine max HOM05D007057 ORTHO05D008878 1.5e-29 135.6 599 60.8
Gohir.D04G026500 Gossypium hirsutum HOM05D007057 ORTHO05D008878 2.5e-29 134.8 552 65.0
RcHm_v2.0_Chr3g0448121 Rosa chinensis HOM05D007057 ORTHO05D008878 2.5e-29 134.8 205 53.2
Duzib177G0705 Durio zibethinus HOM05D007057 ORTHO05D008878 5.5e-29 133.7 203 55.7
TWI75G1373 Tripterygium wilfordii HOM05D007057 ORTHO05D008878 5.5e-29 133.7 403 74.4
AUR62000330 Chenopodium quinoa HOM05D007057 ORTHO05D008878 7.2e-29 133.3 547 64.2
Gohir.A05G390700 Gossypium hirsutum HOM05D007057 ORTHO05D008878 7.2e-29 133.3 551 64.6
PGSC0003DMG400010523 Solanum tuberosum HOM05D007057 ORTHO05D008878 1.6e-28 132.1 204 68.1
Cc09_g03450 Coffea canephora HOM05D007057 ORTHO05D008878 2.7e-28 131.3 403 74.2
Sopen04g025560 Solanum pennellii HOM05D007057 ORTHO05D008878 6.1e-28 130.2 204 67.2
Thecc.05G201600 Theobroma cacao HOM05D007057 ORTHO05D008878 6.1e-28 130.2 554 64.4
Solyc04g056640.1 Solanum lycopersicum HOM05D007057 ORTHO05D008878 8.0e-28 129.8 204 67.6
Peaxi162Scf00006g00421 Petunia axillaris HOM05D007057 ORTHO05D008878 1.0e-27 129.4 199 70.4
Ciclev10013603m.g Citrus clementina HOM05D007057 ORTHO05D008878 1.4e-27 129.0 205 57.6
Cpa.g.sc123.6 Carica papaya HOM05D007057 ORTHO05D008878 3.0e-27 127.9 204 59.3
Peaxi162Scf00976g00023 Petunia axillaris HOM05D007057 ORTHO05D008878 4.0e-27 127.5 198 70.2
MSTRG.8219 Avicennia marina HOM05D007057 ORTHO05D008878 5.2e-27 127.1 403 71.2
COL.COLO4_27405 Corchorus olitorius HOM05D007057 ORTHO05D008878 5.2e-27 127.1 426 68.8
Prupe.6G359800 Prunus persica HOM05D007057 ORTHO05D008878 5.2e-27 127.1 593 56.3
Atru.chr10.1100 Acer truncatum HOM05D007057 ORTHO05D008878 1.5e-26 125.6 402 71.4
Sed0005007 Sechium edule HOM05D007057 ORTHO05D008878 2.0e-26 125.2 201 52.7
EL10Ac4g09982 Beta vulgaris HOM05D007057 ORTHO05D008878 3.4e-26 124.4 397 74.3
Glyma.09G251800 Glycine max HOM05D007057 ORTHO05D008878 4.4e-26 124.0 599 59.9
AUR62006672 Chenopodium quinoa HOM05D007057 ORTHO05D008878 1.7e-25 122.1 548 63.5
CAN.G217.2 Capsicum annuum HOM05D007057 ORTHO05D008878 2.8e-25 121.3 205 65.9
Nitab4.5_0001857g0020 Nicotiana tabacum HOM05D007057 ORTHO05D008878 3.7e-25 120.9 398 72.9
PGR031G0541 Punica granatum HOM05D007057 ORTHO05D008878 1.1e-24 119.4 205 52.7
Ah.04g158850 Amaranthus hybridus HOM05D007057 ORTHO05D008878 1.4e-24 119.0 395 73.9
FAN27G3162 Fragaria x ananassa HOM05D007057 ORTHO05D008878 1.8e-24 118.6 202 48.0
FAN28G1564 Fragaria x ananassa HOM05D007057 ORTHO05D008878 2.4e-24 118.2 202 48.0
Gorai.012G029100 Gossypium raimondii HOM05D007057 ORTHO05D008878 2.4e-24 118.2 552 65.9
Nitab4.5_0000946g0060 Nicotiana tabacum HOM05D007057 ORTHO05D008878 3.1e-24 117.9 204 66.2
DCAR_001923 Daucus carota HOM05D007057 ORTHO05D008878 4.1e-24 117.5 593 59.2
Phvul.008G055400 Phaseolus vulgaris HOM05D007057 ORTHO05D008878 1.6e-23 115.5 264 61.0
Oeu010152.2 Olea europaea HOM05D007057 ORTHO05D008878 7.7e-23 113.2 198 66.7
VMungo1383G0494 Vigna mungo HOM05D007057 ORTHO05D008878 2.9e-22 111.3 202 57.4
Lalb_Chr03g0038391 Lupinus albus HOM05D007057 ORTHO05D008878 6.6e-22 110.2 202 56.9
Medtr7g079550 Medicago truncatula HOM05D007057 ORTHO05D008878 2.5e-21 108.2 202 55.4
Migut.L01029 Erythranthe guttata HOM05D007057 ORTHO05D008878 3.3e-21 107.8 205 62.0
Lalb_Chr19g0126731 Lupinus albus HOM05D007057 ORTHO05D008878 4.2e-21 107.5 202 55.0
ECA248G3256 Erigeron canadensis HOM05D007057 ORTHO05D008878 9.5e-21 106.3 196 63.8
Aqoxy2G03299 Aquilegia oxysepala HOM05D007057 ORTHO05D008878 2.1e-20 105.1 201 65.2
HanXRQChr01g0025821 Helianthus annuus HOM05D007057 ORTHO05D008878 4.7e-20 104.0 537 67.2
Sc16g0010320 Simmondsia chinensis HOM05D007057 ORTHO05D008878 6.1e-20 103.6 203 59.6
MBI08_g39972_MAGBIO Magnolia biondii HOM05D007057 ORTHO05D008878 4.0e-19 100.9 204 63.2
Nn4g26683 Nelumbo nucifera HOM05D007057 ORTHO05D008878 5.2e-19 100.5 203 63.1
PSO675G4505 Papaver somniferum HOM05D007057 ORTHO05D008878 3.4e-18 97.8 198 62.6
Lsat_1_v5_gn_1_58361 Lactuca sativa HOM05D007057 ORTHO05D008878 4.4e-18 97.4 402 72.4
PSO017G0140 Papaver somniferum HOM05D007057 ORTHO05D008878 7.5e-18 96.7 198 62.6
TPR.G28458 Trifolium pratense HOM05D007057 ORTHO05D008878 2.2e-17 95.1 553 59.5
Carub.0002s1110 Capsella rubella HOM05D007057 ORTHO05D008878 1.8e-16 92.0 205 43.9
AL2G22040 Arabidopsis lyrata HOM05D007057 ORTHO05D008878 4.1e-16 90.9 209 36.4
AT1G65380 Arabidopsis thaliana HOM05D007057 ORTHO05D008878 4.1e-16 90.9 209 37.8
CiPaw.07G078900 Carya illinoinensis HOM05D007057 ORTHO05D008878 9.2e-16 89.7 82 57.3
BcaB05g24110 Brassica carinata HOM05D007057 ORTHO05D008878 1.2e-15 89.4 228 42.1
C02p21340 Brassica napus HOM05D007057 ORTHO05D008878 3.5e-15 87.8 230 37.0
SGA_v2.0_scaffold71G23872 Striga asiatica HOM05D007057 ORTHO05D008878 4.5e-15 87.4 206 56.8
Aa31LG2G2430 Aethionema arabicum HOM05D007057 ORTHO05D008878 5.9e-15 87.0 207 35.3
Thhalv10018195m.g Eutrema salsugineum HOM05D007057 ORTHO05D008878 5.9e-15 87.0 207 38.2
A02p13180 Brassica napus HOM05D007057 ORTHO05D008878 7.8e-15 86.7 230 40.4
BcaC03g14695 Brassica carinata HOM05D007057 ORTHO05D008878 1.7e-14 85.5 206 43.2
BolC2t08271H Brassica oleracea HOM05D007057 ORTHO05D008878 1.7e-14 85.5 206 43.2
BraA02t06374Z Brassica rapa HOM05D007057 ORTHO05D008878 1.7e-14 85.5 230 40.9
THA.LOC104823816 Tarenaya hassleriana HOM05D007057 ORTHO05D008878 5.0e-14 84.0 194 38.1
CARHR057050 Cardamine hirsuta HOM05D007057 ORTHO05D008878 1.1e-13 82.8 231 35.9
Sp5g20120 Schrenkiella parvula HOM05D007057 ORTHO05D008878 5.6e-13 80.5 230 43.9
Ca_07967_v3 Cicer arietinum L. HOM05D007057 ORTHO05D008878 2.3e-11 75.1 82 53.7
FAN26G2527 Fragaria x ananassa HOM05D007057 ORTHO05D008878 3.1e-11 74.7 76 50.0
Psat3g104800 Pisum sativum HOM05D007057 ORTHO05D008878 5.2e-11 73.9 82 52.4
AUR62000327 Chenopodium quinoa HOM05D007057 ORTHO05D008878 1.9e-08 65.5 80 48.8
HPP92_021394 Vanilla planifolia HOM05D007057 ORTHO05D008878 1.9e-08 65.5 206 45.1


User provided reference genes

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