Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040743 Camellia sinensis var. sinensis HOM05D001492 ORTHO05D001400 3.0e-114 415.2 218 100.0
Dinv41470 Davidia involucrata HOM05D001492 ORTHO05D001400 4.3e-44 182.2 210 55.2
Actinidia07322 Actinidia chinensis HOM05D001492 ORTHO05D001400 5.5e-39 165.2 197 58.4
Hma1.2p1_0497F.1_g166440 Hydrangea macrophylla HOM05D001492 ORTHO05D001400 6.1e-38 161.8 196 53.6
Actinidia21946 Actinidia chinensis HOM05D001492 ORTHO05D001400 1.0e-32 144.4 198 52.5
GSVIVG01015602001 Vitis vinifera HOM05D001492 ORTHO05D001400 4.2e-31 139.0 197 52.3
Rhsim01G0061000 Rhododendron simsii HOM05D001492 ORTHO05D001400 2.0e-28 130.2 188 48.9
TAR383G0276 Trochodendron aralioides HOM05D000291 ORTHO05D001400 1.3e-27 127.5 190 49.5
Haze_25495 Corylus avellana HOM05D001492 ORTHO05D001400 1.5e-25 120.6 199 46.7
Cfa002925 Carpinus fangiana HOM05D001492 ORTHO05D001400 7.7e-25 118.2 188 46.8
TAR636G0826 Trochodendron aralioides HOM05D001492 ORTHO05D001400 1.3e-24 117.5 192 44.8
Dinv36475 Davidia involucrata HOM05D001492 ORTHO05D001400 5.0e-24 115.5 120 61.7
TAR625G0095 Trochodendron aralioides HOM05D001492 ORTHO05D001400 5.0e-24 115.5 190 44.2
Duzib187G0848 Durio zibethinus HOM05D001492 ORTHO05D001400 8.5e-24 114.8 184 45.1
Peaxi162Scf00088g00125 Petunia axillaris HOM05D001492 ORTHO05D001400 8.5e-24 114.8 186 43.5
QL02p090023 Quercus lobata HOM05D001492 ORTHO05D001400 9.4e-23 111.3 188 46.3
Aqoxy7G03627 Aquilegia oxysepala HOM05D001492 ORTHO05D001400 1.6e-22 110.5 189 42.3
Prupe.7G249100 Prunus persica HOM05D001492 ORTHO05D001400 1.4e-21 107.5 188 43.6
CiPaw.04G175700 Carya illinoinensis HOM05D001492 ORTHO05D001400 2.3e-21 106.7 191 45.0
Duzib168G0736 Durio zibethinus HOM05D001492 ORTHO05D001400 5.2e-21 105.5 180 43.3
FAN19G0605 Fragaria x ananassa HOM05D001492 ORTHO05D001400 8.8e-21 104.8 193 43.0
Manes.14G116228 Manihot esculenta HOM05D001492 ORTHO05D001400 2.6e-20 103.2 185 44.9
Nn2g12127 Nelumbo nucifera HOM05D001492 ORTHO05D001400 2.6e-20 103.2 191 45.0
Thecc.09G133500 Theobroma cacao HOM05D001492 ORTHO05D001400 5.7e-20 102.1 184 43.5
Ciclev10008615m.g Citrus clementina HOM05D001492 ORTHO05D001400 7.4e-20 101.7 187 43.3
FAN26G0983 Fragaria x ananassa HOM05D001492 ORTHO05D001400 2.2e-19 100.1 181 43.6
FAN23G1722 Fragaria x ananassa HOM05D001492 ORTHO05D001400 3.7e-19 99.4 186 43.5
Atru.chr7.1954 Acer truncatum HOM05D001492 ORTHO05D001400 6.3e-19 98.6 186 43.0
Gohir.A06G053500 Gossypium hirsutum HOM05D001492 ORTHO05D001400 6.3e-19 98.6 184 40.8
FvH4_1g02550 Fragaria vesca HOM05D001492 ORTHO05D001400 4.1e-18 95.9 186 42.5
Nitab4.5_0003393g0010 Nicotiana tabacum HOM05D001492 ORTHO05D001400 7.0e-18 95.1 187 41.2
AUR62011181 Chenopodium quinoa HOM05D001492 ORTHO05D001400 1.6e-17 94.0 108 58.3
COL.COLO4_35178 Corchorus olitorius HOM05D001492 ORTHO05D001400 4.5e-17 92.4 181 39.8
Potri.018G125400 Populus trichocarpa HOM05D001492 ORTHO05D001400 1.0e-16 91.3 185 41.6
Potri.T125207 Populus trichocarpa HOM05D001492 ORTHO05D001400 1.0e-16 91.3 185 41.6
AUR62013302 Chenopodium quinoa HOM05D001492 ORTHO05D001400 1.7e-16 90.5 108 54.6
Lj7P435T40 Lonicera japonica HOM05D001492 ORTHO05D001400 2.9e-16 89.7 177 43.5
Sabra18G0106700 Salix brachista HOM05D001492 ORTHO05D001400 8.5e-16 88.2 185 40.0
CANSAT11G1666 Cannabis sativa HOM05D001492 ORTHO05D001400 1.1e-15 87.8 185 40.0
MBI14_g09865_MAGBIO Magnolia biondii HOM05D001492 ORTHO05D001400 1.5e-15 87.4 219 37.4
Nn8g39566 Nelumbo nucifera HOM05D001492 ORTHO05D001400 1.9e-15 87.0 179 40.2
RcHm_v2.0_Chr2g0087581 Rosa chinensis HOM05D001492 ORTHO05D001400 2.5e-15 86.7 188 39.9
PSO170G4027 Papaver somniferum HOM05D001492 ORTHO05D001400 3.2e-15 86.3 217 35.9
FAN28G1598 Fragaria x ananassa HOM05D001492 ORTHO05D001400 7.2e-15 85.1 177 40.7
PSO017G5785 Papaver somniferum HOM05D001492 ORTHO05D001400 1.2e-14 84.3 216 36.1
Ah.09g224670 Amaranthus hybridus HOM05D001492 ORTHO05D001400 1.6e-14 84.0 196 37.2
MD02G1023000 Malus domestica HOM05D001492 ORTHO05D001400 1.6e-14 84.0 185 38.4
MD15G1165700 Malus domestica HOM05D001492 ORTHO05D001400 1.6e-14 84.0 186 38.7
Cc06_g08030 Coffea canephora HOM05D001492 ORTHO05D001400 2.7e-14 83.2 195 39.0
Hund26550 Selenicereus undatus HOM05D001492 ORTHO05D001400 4.0e-13 79.3 216 34.7
Phvul.003G169300 Phaseolus vulgaris HOM05D001492 ORTHO05D001400 1.5e-12 77.4 186 38.7
Potri.006G065200 Populus trichocarpa HOM05D001492 ORTHO05D001400 2.0e-12 77.0 185 37.8
Migut.J01209 Erythranthe guttata HOM05D001492 ORTHO05D001400 2.6e-12 76.6 196 37.8
Glyma.13G160600 Glycine max HOM05D001492 ORTHO05D001400 7.5e-12 75.1 187 38.0
Lalb_Chr13g0301541 Lupinus albus HOM05D001492 ORTHO05D001400 1.7e-11 73.9 187 35.8
Sc18g0000300 Simmondsia chinensis HOM05D001492 ORTHO05D001400 1.7e-11 73.9 170 39.4
arahy.Tifrunner.gnm1.ann1.HJD60P Arachis hypogaea HOM05D001492 ORTHO05D001400 2.8e-11 73.2 180 34.4
Sabra06G0047600 Salix brachista HOM05D001492 ORTHO05D001400 2.8e-11 73.2 185 38.4
arahy.Tifrunner.gnm1.ann1.5RM0K9 Arachis hypogaea HOM05D001492 ORTHO05D001400 4.8e-11 72.4 180 34.4
Gohir.D06G052500 Gossypium hirsutum HOM05D001492 ORTHO05D001400 4.8e-11 72.4 184 35.9
SalBow6G0529 Salvia bowleyana HOM05D001492 ORTHO05D001400 1.1e-10 71.2 190 35.3
Gorai.010G060900 Gossypium raimondii HOM05D001492 ORTHO05D001400 3.1e-10 69.7 184 34.8
VMungo1215G2248 Vigna mungo HOM05D001492 ORTHO05D001400 3.1e-10 69.7 185 37.8
CiPaw.03G249000 Carya illinoinensis HOM05D001492 ORTHO05D001400 4.1e-10 69.3 182 36.8
Glyma.17G110900 Glycine max HOM05D001492 ORTHO05D001400 4.1e-10 69.3 187 34.8
Ca_06946_v3 Cicer arietinum L. HOM05D001492 ORTHO05D001400 7.0e-10 68.6 187 34.8
TWI32G1254 Tripterygium wilfordii HOM05D001492 ORTHO05D001400 7.0e-10 68.6 205 36.1
QL02p089999 Quercus lobata HOM05D001492 ORTHO05D001400 1.2e-09 67.8 117 45.3
Medtr4g115400 Medicago truncatula HOM05D001492 ORTHO05D001400 1.6e-09 67.4 185 35.7
TWI63G0959 Tripterygium wilfordii HOM05D001492 ORTHO05D001400 5.9e-09 65.5 207 34.3
ClCG06G011570 Citrullus lanatus HOM05D001492 ORTHO05D001400 1.0e-08 64.7 181 38.1
Psat4g036600 Pisum sativum HOM05D001492 ORTHO05D001400 2.2e-08 63.5 188 34.6
Lj4g0021715 Lotus japonicus HOM05D001492 ORTHO05D001400 2.9e-08 63.2 185 36.2
Oeu056952.1 Olea europaea HOM05D001492 ORTHO05D001400 5.0e-08 62.4 189 34.9
PGSC0003DMG400006705 Solanum tuberosum HOM05D001492 ORTHO05D001400 4.7e-06 55.8 190 31.1
Lsat_1_v5_gn_5_93880 Lactuca sativa HOM05D001492 ORTHO05D001400 6.1e-06 55.5 185 29.2
THA.LOC104809117 Tarenaya hassleriana HOM05D001492 ORTHO05D001400 6.1e-06 55.5 95 43.2


User provided reference genes

Program Settings