Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040739 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 7.6e-46 186.8 94 100.0
CSS0000995 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.7e-37 159.1 99 82.8
CSS0050109 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000140 8.4e-37 156.8 99 80.8
CSS0048435 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.4e-36 156.0 100 80.0
CSS0006667 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 5.4e-36 154.1 99 80.8
CSS0050060 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.6e-35 152.5 97 80.4
CSS0030175 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 3.9e-34 147.9 100 76.0
CSS0038593 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 7.4e-33 143.7 97 76.3
CSS0015461 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.4e-31 138.7 90 81.1
CSS0023971 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.5e-30 136.0 94 76.6
CSS0040161 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 3.2e-28 128.3 87 78.2
Hma1.2p1_0035F.1_g021930 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.5e-25 118.6 100 58.0
CSS0026146 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.8e-23 112.5 74 78.4
CSS0029785 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.8e-23 112.5 87 70.1
CSS0044283 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.5e-17 92.0 91 58.2
CSS0042933 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 3.3e-17 91.7 91 59.3
CSS0018738 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 5.9e-14 80.9 40 90.0
CSS0048922 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 5.9e-14 80.9 90 53.3
Hund01843 Selenicereus undatus HOM05D012237 ORTHO05D010947 6.1e-11 70.9 99 43.4
CSS0017383 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.5e-09 66.2 40 87.5
CSS0045906 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 4.3e-09 64.7 40 85.0
CSS0010215 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.2e-08 62.4 40 80.0
Atru.chr1.2748 Acer truncatum HOM05D005504 ORTHO05D002688 3.7e-08 61.6 98 33.7
Hma1.2p1_0187F.1_g082350 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.8e-08 61.2 99 37.4
MBI02_g29705_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 1.5e-06 56.2 100 35.0
Phvul.009G207400 Phaseolus vulgaris HOM05D005504 ORTHO05D000585 1.5e-06 56.2 90 32.2
Medtr7g110505 Medicago truncatula HOM05D005504 ORTHO05D002688 2.0e-06 55.8 101 31.7
Medtr8g014565 Medicago truncatula HOM05D005504 ORTHO05D002688 2.0e-06 55.8 101 31.7
MBI01_g33384_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 2.6e-06 55.5 100 35.0
MBI02_g02999_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 2.6e-06 55.5 99 35.4
MBI04_g39511_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 2.6e-06 55.5 99 35.4
MBI14_g40711_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 2.6e-06 55.5 99 35.4
MBI16_g09248_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 2.6e-06 55.5 99 35.4
MBI18_g34566_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 2.6e-06 55.5 99 35.4
MBI18_g29417_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 3.4e-06 55.1 99 35.4
Medtr6g081975 Medicago truncatula HOM05D005504 ORTHO05D002688 3.4e-06 55.1 101 31.7
Actinidia23623 Actinidia chinensis HOM05D000665 ORTHO05D000140 4.5e-06 54.7 97 33.0
AUR62026962 Chenopodium quinoa HOM05D003487 ORTHO05D000140 4.5e-06 54.7 96 31.2
AUR62035004 Chenopodium quinoa HOM05D000034 ORTHO05D000140 4.5e-06 54.7 96 31.2
Lsat_1_v5_gn_5_155201 Lactuca sativa HOM05D000665 ORTHO05D000140 4.5e-06 54.7 100 34.0
MBI18_g31625_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 5.9e-06 54.3 98 33.7
QL03p004678 Quercus lobata HOM05D000665 ORTHO05D000140 5.9e-06 54.3 97 35.1
Hund24317 Selenicereus undatus HOM05D003487 ORTHO05D000140 5.9e-06 54.3 92 32.6
arahy.Tifrunner.gnm1.ann1.G4EFNG Arachis hypogaea HOM05D000034 ORTHO05D002688 7.7e-06 53.9 98 32.7
AUR62005340 Chenopodium quinoa HOM05D003487 ORTHO05D000140 7.7e-06 53.9 101 30.7
MBI18_g28223_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 7.7e-06 53.9 99 34.3


User provided reference genes

Program Settings