Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040729 Camellia sinensis var. sinensis HOM05D004493 ORTHO05D005117 8.4e-73 276.9 141 100.0
Rhsim13G0209100 Rhododendron simsii HOM05D004493 ORTHO05D005117 4.5e-50 201.4 142 73.2
Dinv06245 Davidia involucrata HOM05D004493 ORTHO05D005117 5.8e-50 201.1 142 74.6
Dinv15519 Davidia involucrata HOM05D004493 ORTHO05D005117 5.8e-50 201.1 142 74.6
Actinidia00919 Actinidia chinensis HOM05D004493 ORTHO05D005117 1.7e-49 199.5 145 73.1
Rhsim10G0100200 Rhododendron simsii HOM05D004493 ORTHO05D005117 2.4e-48 195.7 142 71.1
TAR623G0338 Trochodendron aralioides HOM05D004493 ORTHO05D005117 8.4e-41 170.6 137 67.2
Hma1.2p1_0589F.1_g184760 Hydrangea macrophylla HOM05D004493 ORTHO05D005117 1.1e-40 170.2 139 66.2
CiPaw.13G180100 Carya illinoinensis HOM05D004493 ORTHO05D005117 4.2e-40 168.3 132 67.4
Haze_22920 Corylus avellana HOM05D004493 ORTHO05D005117 5.5e-40 167.9 146 63.0
Cfa009530 Carpinus fangiana HOM05D004493 ORTHO05D005117 6.0e-39 164.5 146 61.6
Nn7g36938 Nelumbo nucifera HOM05D004493 ORTHO05D005117 5.7e-37 157.9 139 61.2
MD11G1001000 Malus domestica HOM05D004493 ORTHO05D005117 1.6e-36 156.4 136 57.4
Oeu023963.1 Olea europaea HOM05D004493 ORTHO05D005117 6.3e-36 154.5 141 60.3
PSO384G0423 Papaver somniferum HOM05D004493 ORTHO05D005117 2.4e-35 152.5 137 59.1
Prupe.6G001200 Prunus persica HOM05D004493 ORTHO05D005117 4.1e-35 151.8 136 58.8
TWI34G1214 Tripterygium wilfordii HOM05D004493 ORTHO05D005117 5.3e-35 151.4 134 63.4
Migut.N00529 Erythranthe guttata HOM05D004493 ORTHO05D005117 9.0e-35 150.6 137 61.3
Sopen02g010770 Solanum pennellii HOM05D004493 ORTHO05D005117 1.5e-34 149.8 137 62.0
MBI04_g11451_MAGBIO Magnolia biondii HOM05D004493 ORTHO05D005117 2.6e-34 149.1 133 62.4
Solyc02g032490.3 Solanum lycopersicum HOM05D004493 ORTHO05D005117 4.5e-34 148.3 137 62.0
GSVIVG01025508001 Vitis vinifera HOM05D004493 ORTHO05D005117 5.9e-34 147.9 136 64.7
Sed0013310 Sechium edule HOM05D004493 ORTHO05D005117 7.6e-34 147.5 131 60.3
Hund05058 Selenicereus undatus HOM05D004493 ORTHO05D005117 7.6e-34 147.5 139 54.7
THA.LOC104822690 Tarenaya hassleriana HOM05D004493 ORTHO05D005117 7.6e-34 147.5 131 58.8
RcHm_v2.0_Chr5g0084071 Rosa chinensis HOM05D004493 ORTHO05D005117 1.3e-33 146.7 132 60.6
arahy.Tifrunner.gnm1.ann1.578M4A Arachis hypogaea HOM05D004493 ORTHO05D005117 2.9e-33 145.6 139 57.6
arahy.Tifrunner.gnm1.ann1.M9LRNQ Arachis hypogaea HOM05D004493 ORTHO05D005117 2.9e-33 145.6 139 57.6
Lsat_1_v5_gn_1_71321 Lactuca sativa HOM05D004493 ORTHO05D005117 2.9e-33 145.6 145 55.9
MSTRG.12812 Avicennia marina HOM05D004493 ORTHO05D005117 3.8e-33 145.2 139 58.3
A08p00540 Brassica napus HOM05D004493 ORTHO05D005117 1.4e-32 143.3 131 57.3
Nitab4.5_0000075g0180 Nicotiana tabacum HOM05D004493 ORTHO05D005117 1.4e-32 143.3 137 58.4
Nitab4.5_0000890g0180 Nicotiana tabacum HOM05D004493 ORTHO05D005117 1.4e-32 143.3 137 57.7
COL.COLO4_35067 Corchorus olitorius HOM05D004493 ORTHO05D005117 2.5e-32 142.5 133 61.7
Glyma.06G239100 Glycine max HOM05D004493 ORTHO05D005117 4.2e-32 141.7 127 57.5
BraA08t32112Z Brassica rapa HOM05D004493 ORTHO05D005117 5.5e-32 141.4 130 56.9
CsaV3_5G029430 Cucumis sativus L. HOM05D004493 ORTHO05D005117 7.2e-32 141.0 134 57.5
PGR119G2408 Punica granatum HOM05D004493 ORTHO05D005117 9.3e-32 140.6 138 57.2
Sp1g41160 Schrenkiella parvula HOM05D004493 ORTHO05D005117 9.3e-32 140.6 131 58.8
CAN.G215.14 Capsicum annuum HOM05D004493 ORTHO05D005117 1.2e-31 140.2 137 59.9
Glyma.18G007300 Glycine max HOM05D004493 ORTHO05D005117 1.2e-31 140.2 127 56.7
FAN16G3321 Fragaria x ananassa HOM05D004493 ORTHO05D005117 2.7e-31 139.0 136 56.6
BcaNung06979 Brassica carinata HOM05D004493 ORTHO05D005117 3.6e-31 138.7 130 56.2
Carub.0001s4405 Capsella rubella HOM05D004493 ORTHO05D005117 3.6e-31 138.7 131 55.7
CDE02G2692 Ceratophyllum demersum HOM05D004493 ORTHO05D005117 3.6e-31 138.7 131 53.4
MELO3C011789.2 Cucumis melo HOM05D004493 ORTHO05D005117 4.6e-31 138.3 134 56.0
Thhalv10011181m.g Eutrema salsugineum HOM05D004493 ORTHO05D005117 4.6e-31 138.3 131 55.7
DCAR_024091 Daucus carota HOM05D004493 ORTHO05D005117 6.1e-31 137.9 138 60.1
AL1G63570 Arabidopsis lyrata HOM05D004493 ORTHO05D005117 1.0e-30 137.1 131 54.2
QL01p007857 Quercus lobata HOM05D004493 ORTHO05D005117 1.8e-30 136.3 139 57.6
Lj5g0011313 Lotus japonicus HOM05D004493 ORTHO05D005117 3.0e-30 135.6 127 55.9
CARHR045230 Cardamine hirsuta HOM05D004493 ORTHO05D005117 3.9e-30 135.2 131 56.5
FAN11G0901 Fragaria x ananassa HOM05D004493 ORTHO05D005117 5.1e-30 134.8 136 55.1
FAN11G3847 Fragaria x ananassa HOM05D004493 ORTHO05D005117 5.1e-30 134.8 136 55.1
FAN21G4070 Fragaria x ananassa HOM05D004493 ORTHO05D005117 5.1e-30 134.8 136 55.1
Gorai.004G097900 Gossypium raimondii HOM05D004493 ORTHO05D005117 6.7e-30 134.4 134 59.0
ClCG11G012960 Citrullus lanatus HOM05D004493 ORTHO05D005117 8.7e-30 134.0 134 55.2
Manes.15G110800 Manihot esculenta HOM05D004493 ORTHO05D005117 8.7e-30 134.0 131 54.2
FvH4_3g45960 Fragaria vesca HOM05D004493 ORTHO05D005117 1.1e-29 133.7 136 54.4
FAN25G0645 Fragaria x ananassa HOM05D004493 ORTHO05D005117 1.1e-29 133.7 136 54.4
Gohir.D08G092400 Gossypium hirsutum HOM05D004493 ORTHO05D005117 1.1e-29 133.7 134 59.0
Thecc.09G205800 Theobroma cacao HOM05D004493 ORTHO05D005117 1.1e-29 133.7 133 57.1
AT1G55540 Arabidopsis thaliana HOM05D004493 ORTHO05D005117 3.3e-29 132.1 131 52.7
Lalb_Chr13g0295751 Lupinus albus HOM05D004493 ORTHO05D005117 7.4e-29 131.0 133 51.1
Duzib168G1306 Durio zibethinus HOM05D004493 ORTHO05D005117 1.6e-28 129.8 134 56.0
CANSAT11G1563 Cannabis sativa HOM05D004493 ORTHO05D005117 3.7e-28 128.6 142 52.8
Psat6g065800 Pisum sativum HOM05D004493 ORTHO05D005117 3.7e-28 128.6 127 55.9
AUR62015878 Chenopodium quinoa HOM05D004493 ORTHO05D005117 6.3e-28 127.9 130 50.8
EL10Ac4g07695 Beta vulgaris HOM05D004493 ORTHO05D005117 8.2e-28 127.5 141 46.8
HPP92_014371 Vanilla planifolia HOM05D004493 ORTHO05D005117 8.2e-28 127.5 134 52.2
SGA_v2.0_scaffold6G03332 Striga asiatica HOM05D004493 ORTHO05D005117 1.1e-27 127.1 135 54.8
Aa31LG10G700 Aethionema arabicum HOM05D004493 ORTHO05D005117 1.8e-27 126.3 131 48.9
SalBow3G2955 Salvia bowleyana HOM05D004493 ORTHO05D005117 1.8e-27 126.3 140 51.4
ATR0068G024 Amborella trichopoda HOM05D004493 ORTHO05D005117 3.1e-27 125.6 132 49.2
Cc01_g00330 Coffea canephora HOM05D004493 ORTHO05D005117 3.1e-27 125.6 134 51.5
Aqoxy1G00107 Aquilegia oxysepala HOM05D004493 ORTHO05D005117 4.1e-27 125.2 137 48.2
TPR.G22583 Trifolium pratense HOM05D004493 ORTHO05D005117 4.1e-27 125.2 127 54.3
Phvul.007G078700 Phaseolus vulgaris HOM05D004493 ORTHO05D005117 6.9e-27 124.4 129 55.0
AUR62020345 Chenopodium quinoa HOM05D004493 ORTHO05D005117 1.2e-26 123.6 130 50.0
VMungo0720G2527 Vigna mungo HOM05D004493 ORTHO05D005117 1.5e-26 123.2 129 52.7
Ah.06g182270 Amaranthus hybridus HOM05D004493 ORTHO05D005117 3.4e-26 122.1 128 50.0
Ca_09617_v3 Cicer arietinum L. HOM05D004493 ORTHO05D005117 4.5e-26 121.7 128 52.3
Ciclev10014017m.g Citrus clementina HOM05D004493 ORTHO05D005117 7.7e-26 120.9 136 52.2
Potri.003G223400 Populus trichocarpa HOM05D004493 ORTHO05D005117 7.7e-26 120.9 136 52.9
BcaC01g01535 Brassica carinata HOM05D004493 ORTHO05D005117 1.7e-25 119.8 130 51.5
C03p92870 Brassica napus HOM05D004493 ORTHO05D005117 1.7e-25 119.8 130 51.5
ECA248G0177 Erigeron canadensis HOM05D004493 ORTHO05D000562 2.2e-25 119.4 140 52.9
BolC3t21593H Brassica oleracea HOM05D004493 ORTHO05D005117 2.9e-25 119.0 130 51.5
Medtr1g069005 Medicago truncatula HOM05D004493 ORTHO05D005117 3.2e-24 115.5 127 51.2
unitig_0.g1239 Utricularia gibba HOM05D004493 ORTHO05D005117 3.0e-22 109.0 148 43.9
Sabra03G0166000 Salix brachista HOM05D004493 ORTHO05D005117 6.7e-22 107.8 134 49.3
Cpa.g.sc119.15 Carica papaya HOM05D004493 ORTHO05D005117 5.7e-21 104.8 114 51.8
Peaxi162Scf00186g01613 Petunia axillaris HOM05D004493 ORTHO05D005117 2.4e-19 99.4 146 46.6
Zm00001eb331030 Zea mays HOM05D004493 ORTHO05D005117 2.4e-19 99.4 135 44.4
SEGI_11629 Sequoiadendron giganteum HOM05D004493 ORTHO05D005117 2.6e-18 95.9 125 39.2
Eucgr.J01742 Eucalyptus grandis HOM05D004493 ORTHO05D005117 2.2e-17 92.8 134 44.0
Mapoly0022s0121 Marchantia polymorpha HOM05D004493 ORTHO05D005117 9.1e-11 70.9 118 39.0
Lj2A889G19 Lonicera japonica HOM05D004493 ORTHO05D005117 5.9e-10 68.2 61 65.6
CDE02G0298 Ceratophyllum demersum HOM05D004493 ORTHO05D005117 2.5e-08 62.8 60 51.7
RcHm_v2.0_Chr7g0214951 Rosa chinensis HOM05D004493 ORTHO05D005117 3.2e-08 62.4 58 60.3
QL04p013873 Quercus lobata HOM05D004493 ORTHO05D005117 2.1e-07 59.7 71 47.9


User provided reference genes

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