Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040657 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 6.8e-99 364.0 184 100.0
CSS0049801 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 1.4e-96 356.3 185 98.9
Actinidia22895 Actinidia chinensis HOM05D001617 ORTHO05D008611 1.4e-67 260.0 177 72.9
Dinv40191 Davidia involucrata HOM05D001617 ORTHO05D008611 2.9e-65 252.3 174 72.4
Actinidia17356 Actinidia chinensis HOM05D001617 ORTHO05D008611 8.4e-65 250.8 173 74.0
Rhsim10G0195300 Rhododendron simsii HOM05D001617 ORTHO05D008611 1.9e-64 249.6 181 71.8
Hma1.2p1_0300F.1_g117970 Hydrangea macrophylla HOM05D001617 ORTHO05D008611 3.6e-60 235.3 176 66.5
TAR625G0652 Trochodendron aralioides HOM05D001617 ORTHO05D008611 2.0e-58 229.6 169 66.3
Haze_03607 Corylus avellana HOM05D001617 ORTHO05D008611 6.0e-55 218.0 170 64.1
RcHm_v2.0_Chr2g0097101 Rosa chinensis HOM05D001617 ORTHO05D008611 1.7e-54 216.5 170 63.5
FvH4_1g10271 Fragaria vesca HOM05D001617 ORTHO05D008611 3.9e-54 215.3 170 62.9
QL06p053003 Quercus lobata HOM05D001617 ORTHO05D008611 3.9e-54 215.3 171 63.2
FAN19G1097 Fragaria x ananassa HOM05D001617 ORTHO05D002495 5.1e-54 214.9 170 62.4
Ca_24984_v3 Cicer arietinum L. HOM05D001617 ORTHO05D008611 1.9e-53 213.0 173 62.4
MD15G1230700 Malus domestica HOM05D001617 ORTHO05D008611 2.5e-53 212.6 170 62.9
Nn5g30995 Nelumbo nucifera HOM05D001617 ORTHO05D008611 2.5e-53 212.6 173 60.1
Prupe.7G183400 Prunus persica HOM05D001617 ORTHO05D008611 5.6e-53 211.5 166 65.1
Potri.018G026700 Populus trichocarpa HOM05D001617 ORTHO05D008611 9.6e-53 210.7 171 62.0
MD02G1114800 Malus domestica HOM05D001617 ORTHO05D008611 1.3e-52 210.3 170 62.9
TPR.G24692 Trifolium pratense HOM05D001617 ORTHO05D008611 4.8e-52 208.4 173 59.5
Sabra06G0199600 Salix brachista HOM05D001617 ORTHO05D008611 6.2e-52 208.0 170 64.7
Manes.03G014200 Manihot esculenta HOM05D001617 ORTHO05D008611 1.1e-51 207.2 166 60.8
HanXRQChr03g0061381 Helianthus annuus HOM05D001617 ORTHO05D008611 2.4e-51 206.1 175 56.0
CiPaw.08G181900 Carya illinoinensis HOM05D001617 ORTHO05D008611 4.0e-51 205.3 171 63.2
Atru.chr3.130 Acer truncatum HOM05D001617 ORTHO05D008611 4.5e-50 201.8 173 57.2
TPR.G27884 Trifolium pratense HOM05D001617 ORTHO05D008611 4.5e-50 201.8 173 58.4
Psat4g142640 Pisum sativum HOM05D001617 ORTHO05D008611 7.6e-50 201.1 173 57.2
Ciclev10026581m.g Citrus clementina HOM05D001617 ORTHO05D008611 3.8e-49 198.7 175 58.9
FAN23G1150 Fragaria x ananassa HOM05D001617 ORTHO05D002495 4.9e-49 198.4 206 51.5
Glyma.01G158500 Glycine max HOM05D001617 ORTHO05D008611 4.9e-49 198.4 170 59.4
Lalb_Chr05g0214811 Lupinus albus HOM05D001617 ORTHO05D008611 4.9e-49 198.4 168 59.5
Sc07g0001380 Simmondsia chinensis HOM05D001617 ORTHO05D008611 1.4e-48 196.8 172 56.4
Glyma.11G086100 Glycine max HOM05D001617 ORTHO05D008611 1.9e-48 196.4 170 58.8
Medtr7g006210 Medicago truncatula HOM05D001617 ORTHO05D008611 1.9e-48 196.4 170 57.1
Lsat_1_v5_gn_7_41980 Lactuca sativa HOM05D001617 ORTHO05D008611 2.4e-48 196.1 176 54.0
ECA240G2496 Erigeron canadensis HOM05D001617 ORTHO05D008611 5.4e-48 194.9 177 56.5
Peaxi162Scf00580g00110 Petunia axillaris HOM05D001617 ORTHO05D008611 7.1e-48 194.5 178 57.3
Phvul.002G116800 Phaseolus vulgaris HOM05D001617 ORTHO05D008611 7.1e-48 194.5 171 55.6
arahy.Tifrunner.gnm1.ann1.00REGV Arachis hypogaea HOM05D001617 ORTHO05D008611 9.3e-48 194.1 169 56.8
arahy.Tifrunner.gnm1.ann1.P3NXZX Arachis hypogaea HOM05D001617 ORTHO05D008611 9.3e-48 194.1 169 56.8
Solyc02g038814.1 Solanum lycopersicum HOM05D001617 ORTHO05D008611 2.1e-47 193.0 177 57.1
Sopen02g012580 Solanum pennellii HOM05D001617 ORTHO05D008611 2.1e-47 193.0 177 57.1
Duzib147G0359 Durio zibethinus HOM05D001617 ORTHO05D008611 3.5e-47 192.2 180 58.3
PSO210G2591 Papaver somniferum HOM05D001617 ORTHO05D008611 4.6e-47 191.8 174 51.7
Lalb_Chr16g0380051 Lupinus albus HOM05D001617 ORTHO05D008611 3.0e-46 189.1 170 55.3
Aqoxy6G01611 Aquilegia oxysepala HOM05D001617 ORTHO05D008611 3.9e-46 188.7 165 53.3
GSVIVG01013391001 Vitis vinifera HOM05D001617 ORTHO05D008611 5.1e-46 188.3 168 58.3
Nitab4.5_0001365g0060 Nicotiana tabacum HOM05D001617 ORTHO05D008611 1.9e-45 186.4 182 55.5
AUR62003746 Chenopodium quinoa HOM05D001617 ORTHO05D008611 3.3e-45 185.7 174 53.4
PGR119G0287 Punica granatum HOM05D001617 ORTHO05D008611 1.6e-44 183.3 167 56.9
Thecc.01G005100 Theobroma cacao HOM05D001617 ORTHO05D008611 1.6e-44 183.3 176 57.4
Lj2g0016890 Lotus japonicus HOM05D001617 ORTHO05D008611 6.2e-44 181.4 169 59.2
Nitab4.5_0000467g0050 Nicotiana tabacum HOM05D001617 ORTHO05D008611 6.2e-44 181.4 199 50.8
PSO761G0409 Papaver somniferum HOM05D001617 ORTHO05D008611 6.2e-44 181.4 178 48.3
SGA_v2.0_scaffold280G46856 Striga asiatica HOM05D001617 ORTHO05D008611 6.2e-44 181.4 185 50.3
ATR0807G073 Amborella trichopoda HOM05D001617 ORTHO05D008611 6.9e-43 177.9 177 50.8
Potri.006G255301 Populus trichocarpa HOM05D001617 ORTHO05D008611 6.9e-43 177.9 168 56.5
Cc07_g11900 Coffea canephora HOM05D001617 ORTHO05D008611 1.2e-42 177.2 176 54.5
Migut.H02499 Erythranthe guttata HOM05D001617 ORTHO05D008611 1.5e-42 176.8 181 49.2
AUR62002049 Chenopodium quinoa HOM05D001617 ORTHO05D008611 2.6e-42 176.0 174 51.7
Eucgr.I02221 Eucalyptus grandis HOM05D001617 ORTHO05D008611 2.6e-42 176.0 171 54.4
PGSC0003DMG400017488 Solanum tuberosum HOM05D001617 ORTHO05D008611 3.4e-42 175.6 199 50.3
Sed0024019 Sechium edule HOM05D001617 ORTHO05D008611 7.6e-42 174.5 170 55.3
Gorai.003G002100 Gossypium raimondii HOM05D001617 ORTHO05D008611 1.7e-41 173.3 165 60.0
Gohir.D03G001800 Gossypium hirsutum HOM05D001617 ORTHO05D008611 3.8e-41 172.2 165 59.4
THA.LOC104819716 Tarenaya hassleriana HOM05D001617 ORTHO05D008611 6.5e-41 171.4 176 50.0
Gohir.A02G178000 Gossypium hirsutum HOM05D001617 ORTHO05D008611 1.1e-40 170.6 165 59.4
CsaV3_3G000210 Cucumis sativus L. HOM05D001617 ORTHO05D008611 3.2e-40 169.1 174 53.4
AT4G35530 Arabidopsis thaliana HOM05D001617 ORTHO05D008611 1.2e-39 167.2 171 53.8
TWI09G0535 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 2.1e-39 166.4 170 55.3
AL7G15630 Arabidopsis lyrata HOM05D001617 ORTHO05D008611 3.5e-39 165.6 173 51.4
A03p63650 Brassica napus HOM05D001617 ORTHO05D008611 3.5e-39 165.6 171 52.0
BraA03t15436Z Brassica rapa HOM05D001617 ORTHO05D008611 3.5e-39 165.6 171 52.0
Medtr8g446540 Medicago truncatula HOM05D001617 ORTHO05D008611 6.0e-39 164.9 151 57.0
Aa31LG6G12490 Aethionema arabicum HOM05D001617 ORTHO05D008611 2.3e-38 162.9 180 50.0
Carub.0007s0479 Capsella rubella HOM05D001617 ORTHO05D008611 3.0e-38 162.5 170 52.4
C07p61220 Brassica napus HOM05D001617 ORTHO05D008611 3.9e-38 162.2 172 51.7
BolC7t46548H Brassica oleracea HOM05D001617 ORTHO05D008611 3.9e-38 162.2 172 51.7
Hund03599 Selenicereus undatus HOM05D001617 ORTHO05D008611 1.1e-37 160.6 173 48.6
Os05g0165400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 1.9e-37 159.8 165 48.5
A01p03080 Brassica napus HOM05D001617 ORTHO05D008611 5.7e-37 158.3 181 45.9
Zm00001eb123330 Zea mays HOM05D001617 ORTHO05D008611 1.3e-36 157.1 173 46.8
BraA01t00292Z Brassica rapa HOM05D001617 ORTHO05D008611 1.6e-36 156.8 181 45.3
Sp7g33310 Schrenkiella parvula HOM05D001617 ORTHO05D008611 2.8e-36 156.0 176 50.6
Thhalv10026286m.g Eutrema salsugineum HOM05D001617 ORTHO05D008611 4.8e-36 155.2 172 50.0
BcaNung03634 Brassica carinata HOM05D001617 ORTHO05D008611 1.1e-35 154.1 168 50.0
TWI73G0916 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 2.4e-35 152.9 169 52.1
VMungo1215G1547 Vigna mungo HOM05D004017 ORTHO05D004612 3.1e-35 152.5 111 65.8
HPP92_001135 Vanilla planifolia HOM05D001617 ORTHO05D008611 3.4e-34 149.1 167 46.1
ClCG10G000190 Citrullus lanatus HOM05D001617 ORTHO05D008611 5.8e-34 148.3 185 47.6
SalBow8G0576 Salvia bowleyana HOM05D001617 ORTHO05D008611 1.7e-33 146.7 167 47.9
CANSAT25G0226 Cannabis sativa HOM05D001617 ORTHO05D008611 1.1e-32 144.1 185 46.5
QL02p015100 Quercus lobata HOM05D001617 ORTHO05D008611 1.4e-32 143.7 159 49.7
EL10Ac6g15051 Beta vulgaris HOM05D001617 ORTHO05D008611 3.2e-32 142.5 216 40.7
MELO3C013716.2 Cucumis melo HOM05D001617 ORTHO05D008611 4.2e-32 142.1 85 71.8
CARHR243860 Cardamine hirsuta HOM05D001617 ORTHO05D008611 7.2e-32 141.4 116 60.3
COL.COLO4_22553 Corchorus olitorius HOM05D001617 ORTHO05D008611 2.7e-31 139.4 175 47.4
Manes.03G014750 Manihot esculenta HOM05D001617 ORTHO05D008611 3.5e-31 139.0 173 44.5
Lj2g0001157 Lotus japonicus HOM05D001617 ORTHO05D008611 6.1e-31 138.3 109 65.1
SEGI_30027 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 5.7e-29 131.7 177 39.5
Haze_22828 Corylus avellana HOM05D006218 ORTHO05D007338 5.3e-27 125.2 131 49.6
CDE05G1602 Ceratophyllum demersum HOM05D001617 ORTHO05D008611 6.9e-27 124.8 152 40.8
SEGI_12529 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 2.0e-26 123.2 92 56.5
QL02p015033 Quercus lobata HOM05D001617 ORTHO05D008611 7.7e-26 121.3 157 45.9
BcaNung00584 Brassica carinata HOM05D001617 ORTHO05D008611 1.7e-25 120.2 169 45.0
FAN26G0309 Fragaria x ananassa HOM05D001617 ORTHO05D002495 2.2e-25 119.8 75 73.3
unitig_46.g18791 Utricularia gibba HOM05D001617 ORTHO05D008611 1.1e-24 117.5 169 40.2
TAR381G0965 Trochodendron aralioides HOM05D001617 ORTHO05D008611 5.5e-24 115.2 68 79.4
Pp3c25_310 Physcomitrium patens HOM05D001617 ORTHO05D008611 5.1e-22 108.6 166 37.3
C01p03430 Brassica napus HOM05D001617 ORTHO05D008611 1.3e-20 104.0 189 38.1
BolC1t00330H Brassica oleracea HOM05D001617 ORTHO05D008611 1.3e-20 104.0 189 38.1
AagrBONN_evm.TU.Sc2ySwM_368.1506 Anthoceros agrestis HOM05D001617 ORTHO05D008611 2.4e-19 99.8 129 41.1
Os01g0166400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 9.1e-19 97.8 93 48.4
Mapoly0064s0006 Marchantia polymorpha HOM05D001617 ORTHO05D008611 4.5e-18 95.5 82 46.3
Medtr7g005770 Medicago truncatula HOM05D001617 ORTHO05D008611 7.2e-16 88.2 68 63.2
arahy.Tifrunner.gnm1.ann1.JF0LYH Arachis hypogaea HOM05D001617 ORTHO05D008611 1.1e-13 80.9 81 55.6
FAN28G0538 Fragaria x ananassa HOM05D001617 ORTHO05D002495 4.8e-12 75.5 75 52.0
SHI18558 Sapria himalayana HOM05D000291 ORTHO05D001358 8.2e-12 74.7 146 38.4
CBR_g38242 Chara braunii HOM05D001617 ORTHO05D008611 1.1e-11 74.3 85 40.0


User provided reference genes

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