Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040633 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 2.1e-186 655.6 335 100.0
CSS0031560 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 3.6e-159 565.1 399 77.9
CSS0025326 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 2.0e-157 559.3 379 80.5
CSS0020440 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 9.6e-152 540.4 368 80.2
CSS0034194 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 2.2e-148 529.3 397 74.8
CSS0037716 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 2.9e-148 528.9 397 75.3
CSS0043256 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 1.0e-145 520.4 386 74.6
CSS0008548 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 4.2e-131 471.9 416 66.1
CSS0003173 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 2.0e-125 453.0 407 64.9
Actinidia28645 Actinidia chinensis HOM05D004724 ORTHO05D005734 7.7e-125 451.1 416 61.1
CSS0030883 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 3.9e-121 438.7 381 66.4
Lj6A780T47 Lonicera japonica HOM05D004724 ORTHO05D005734 1.8e-118 429.9 419 58.0
GSVIVG01012211001 Vitis vinifera HOM05D004724 ORTHO05D005734 2.1e-114 416.4 416 56.2
Hma1.2p1_0354F.1_g133420 Hydrangea macrophylla HOM05D004724 ORTHO05D005734 3.0e-113 412.5 416 57.0
Nn4g23396 Nelumbo nucifera HOM05D004724 ORTHO05D005734 3.3e-112 409.1 412 55.6
Nn3g17424 Nelumbo nucifera HOM05D004724 ORTHO05D005734 1.8e-110 403.3 414 54.8
QL03p072107 Quercus lobata HOM05D004724 ORTHO05D005734 9.1e-110 401.0 415 54.7
QL03p072513 Quercus lobata HOM05D004724 ORTHO05D005734 9.1e-110 401.0 415 54.5
CiPaw.05G125900 Carya illinoinensis HOM05D004724 ORTHO05D005734 1.2e-109 400.6 414 54.3
Migut.E00049 Erythranthe guttata HOM05D004724 ORTHO05D005734 7.7e-109 397.9 419 52.7
Sc04g0007630 Simmondsia chinensis HOM05D004724 ORTHO05D005734 7.7e-109 397.9 424 53.1
Dinv15029 Davidia involucrata HOM05D004724 ORTHO05D005734 9.4e-107 391.0 368 60.1
Dinv34076 Davidia involucrata HOM05D004724 ORTHO05D005734 9.4e-107 391.0 368 60.1
HanXRQChr08g0211831 Helianthus annuus HOM05D004724 ORTHO05D005734 1.6e-106 390.2 419 52.7
vmacro16381 Vaccinium macrocarpon HOM05D004724 ORTHO05D005734 2.7e-106 389.4 509 47.5
MSTRG.13448 Avicennia marina HOM05D004724 ORTHO05D005734 3.0e-105 386.0 427 52.5
Eucgr.B03160 Eucalyptus grandis HOM05D004724 ORTHO05D005734 1.2e-104 384.0 416 53.4
MD13G1063400 Malus domestica HOM05D004724 ORTHO05D005734 3.4e-104 382.5 416 52.6
TWI31G1115 Tripterygium wilfordii HOM05D004724 ORTHO05D005734 4.4e-104 382.1 415 52.5
PGR102G0250 Punica granatum HOM05D004724 ORTHO05D005734 1.7e-103 380.2 415 52.0
MD16G1061800 Malus domestica HOM05D004724 ORTHO05D005734 2.8e-103 379.4 416 53.1
Thecc.02G332500 Theobroma cacao HOM05D004724 ORTHO05D005734 2.8e-103 379.4 415 52.0
TWI79G1393 Tripterygium wilfordii HOM05D004724 ORTHO05D005734 3.1e-102 375.9 414 51.9
Lalb_Chr10g0098781 Lupinus albus HOM05D004724 ORTHO05D005734 1.1e-99 367.5 416 50.7
Oeu048146.1 Olea europaea HOM05D004724 ORTHO05D005734 1.9e-99 366.7 421 53.7
TAR374G1337 Trochodendron aralioides HOM05D004724 ORTHO05D005734 3.2e-99 365.9 414 52.4
TAR622G0524 Trochodendron aralioides HOM05D004724 ORTHO05D005734 3.2e-99 365.9 414 52.4
THA.LOC104822013 Tarenaya hassleriana HOM05D004724 ORTHO05D005734 4.2e-99 365.5 414 50.0
Gorai.005G145100 Gossypium raimondii HOM05D004724 ORTHO05D005734 8.0e-98 361.3 415 50.4
RcHm_v2.0_Chr4g0438491 Rosa chinensis HOM05D004724 ORTHO05D005734 8.0e-98 361.3 416 50.0
Peaxi162Scf00175g00020 Petunia axillaris HOM05D004724 ORTHO05D005734 1.0e-97 360.9 414 49.0
Gohir.A03G104200 Gossypium hirsutum HOM05D004724 ORTHO05D005734 1.4e-97 360.5 416 51.0
Gohir.D02G129300 Gossypium hirsutum HOM05D004724 ORTHO05D005734 1.8e-97 360.1 415 50.1
CARHR025500 Cardamine hirsuta HOM05D004724 ORTHO05D005734 6.8e-97 358.2 415 49.4
Rhsim12G0135900 Rhododendron simsii HOM05D004724 ORTHO05D005734 2.0e-96 356.7 323 61.0
MELO3C011422.2 Cucumis melo HOM05D004724 ORTHO05D005734 1.3e-95 354.0 414 49.5
Haze_11916 Corylus avellana HOM05D004724 ORTHO05D005734 1.7e-95 353.6 377 53.3
Nitab4.5_0000231g0420 Nicotiana tabacum HOM05D004724 ORTHO05D005734 2.8e-95 352.8 406 49.0
CsaV3_6G033660 Cucumis sativus L. HOM05D004724 ORTHO05D005734 3.7e-95 352.4 414 49.3
PGSC0003DMG400028320 Solanum tuberosum HOM05D004724 ORTHO05D005734 3.7e-95 352.4 406 48.3
MBI16_g13587_MAGBIO Magnolia biondii HOM05D004724 ORTHO05D005734 4.9e-95 352.1 414 50.2
Nitab4.5_0004171g0040 Nicotiana tabacum HOM05D004724 ORTHO05D005734 4.9e-95 352.1 418 48.3
Lsat_1_v5_gn_8_47681 Lactuca sativa HOM05D004724 ORTHO05D005734 1.4e-94 350.5 372 53.2
Aa31LG7G8630 Aethionema arabicum HOM05D004724 ORTHO05D005734 1.8e-94 350.1 411 47.7
SalBow2G3108 Salvia bowleyana HOM05D004724 ORTHO05D005734 2.4e-94 349.7 427 47.3
Sopen05g007210 Solanum pennellii HOM05D004724 ORTHO05D005734 3.1e-94 349.4 406 47.5
Lj2g0005374 Lotus japonicus HOM05D004724 ORTHO05D005734 4.1e-94 349.0 416 47.4
AT1G26460 Arabidopsis thaliana HOM05D004724 ORTHO05D005734 9.2e-94 347.8 415 47.7
TPR.G24471 Trifolium pratense HOM05D004724 ORTHO05D005734 2.7e-93 346.3 424 47.9
Manes.01G028400 Manihot esculenta HOM05D004724 ORTHO05D005734 4.5e-93 345.5 415 47.0
Glyma.01G058200 Glycine max HOM05D004724 ORTHO05D005734 1.7e-92 343.6 416 47.8
Atru.chr11.1649 Acer truncatum HOM05D004724 ORTHO05D005734 2.3e-92 343.2 416 48.3
Ca_04959_v3 Cicer arietinum L. HOM05D004724 ORTHO05D005734 2.3e-92 343.2 424 47.6
CAN.G616.33 Capsicum annuum HOM05D004724 ORTHO05D005734 2.9e-92 342.8 406 46.8
PSO017G2003 Papaver somniferum HOM05D004724 ORTHO05D005734 1.1e-91 340.9 413 47.2
Cfa008886 Carpinus fangiana HOM05D004724 ORTHO05D005734 1.9e-91 340.1 415 48.7
BolC5t31188H Brassica oleracea HOM05D004724 ORTHO05D005734 2.5e-91 339.7 413 47.0
PSO478G4140 Papaver somniferum HOM05D004724 ORTHO05D005734 3.3e-91 339.3 413 47.0
ECA233G5398 Erigeron canadensis HOM05D004724 ORTHO05D005734 4.3e-91 339.0 375 50.9
AUR62007926 Chenopodium quinoa HOM05D004724 ORTHO05D005734 7.3e-91 338.2 415 49.2
AUR62003111 Chenopodium quinoa HOM05D004724 ORTHO05D005734 9.5e-91 337.8 415 48.9
Glyma.02G116000 Glycine max HOM05D004724 ORTHO05D005734 2.1e-90 336.7 412 47.6
ClCG08G010390 Citrullus lanatus HOM05D004724 ORTHO05D005734 2.8e-90 336.3 422 46.4
FvH4_4g30160 Fragaria vesca HOM05D004724 ORTHO05D005734 3.6e-90 335.9 417 47.5
SalBow8G1172 Salvia bowleyana HOM05D004724 ORTHO05D005734 1.8e-89 333.6 457 44.2
Potri.010G159100 Populus trichocarpa HOM05D004724 ORTHO05D005734 2.3e-89 333.2 419 48.0
Ciclev10031249m.g Citrus clementina HOM05D004724 ORTHO05D005734 3.0e-89 332.8 424 46.9
Medtr5g044270 Medicago truncatula HOM05D004724 ORTHO05D005734 6.8e-89 331.6 416 45.7
Sed0014019 Sechium edule HOM05D004724 ORTHO05D005734 4.4e-88 328.9 415 46.7
SGA_v2.0_scaffold16G07777 Striga asiatica HOM05D004724 ORTHO05D005734 5.7e-88 328.6 415 47.5
AL1G39280 Arabidopsis lyrata HOM05D004724 ORTHO05D005734 7.5e-88 328.2 415 46.3
Carub.0001s2456 Capsella rubella HOM05D004724 ORTHO05D005734 4.9e-87 325.5 415 45.8
Prupe.1G286100 Prunus persica HOM05D004724 ORTHO05D005734 6.4e-87 325.1 416 46.2
EL10Ac6g14982 Beta vulgaris HOM05D004724 ORTHO05D005734 5.4e-86 322.0 415 47.0
BraA09t39487Z Brassica rapa HOM05D004724 ORTHO05D005734 2.0e-85 320.1 413 44.6
Cc11_g12080 Coffea canephora HOM05D004724 ORTHO05D005734 2.7e-85 319.7 419 45.1
A09p39880 Brassica napus HOM05D004724 ORTHO05D005734 3.5e-85 319.3 413 44.6
C05p24540 Brassica napus HOM05D004724 ORTHO05D005734 3.5e-85 319.3 413 44.8
ATR0064G103 Amborella trichopoda HOM05D004724 ORTHO05D005734 1.1e-83 314.3 372 49.2
FAN22G1297 Fragaria x ananassa HOM05D004724 ORTHO05D005734 1.1e-83 314.3 424 44.8
CANSAT64G0483 Cannabis sativa HOM05D004724 ORTHO05D005734 1.5e-83 313.9 415 46.0
DCAR_027471 Daucus carota HOM05D004724 ORTHO05D005734 1.9e-83 313.5 426 44.1
Thhalv10007071m.g Eutrema salsugineum HOM05D004724 ORTHO05D005734 3.3e-83 312.8 413 45.3
FAN12G2645 Fragaria x ananassa HOM05D004724 ORTHO05D005734 3.3e-83 312.8 417 45.6
COL.COLO4_27896 Corchorus olitorius HOM05D004724 ORTHO05D005734 1.2e-82 310.8 414 45.4
Migut.L01196 Erythranthe guttata HOM05D004724 ORTHO05D005734 6.8e-81 305.1 429 45.5
THA.LOC104805036 Tarenaya hassleriana HOM05D004724 ORTHO05D005734 2.6e-80 303.1 414 43.2
Sabra10G0120800 Salix brachista HOM05D004724 ORTHO05D005734 5.4e-78 295.4 419 44.4
arahy.Tifrunner.gnm1.ann1.06XI8G Arachis hypogaea HOM05D004724 ORTHO05D005734 6.0e-77 292.0 415 44.1
arahy.Tifrunner.gnm1.ann1.CTA0UQ Arachis hypogaea HOM05D004724 ORTHO05D005734 1.7e-76 290.4 413 43.6
HPP92_009526 Vanilla planifolia HOM05D004724 ORTHO05D005734 6.6e-76 288.5 459 40.7
Psat2g129640 Pisum sativum HOM05D004724 ORTHO05D005734 1.5e-75 287.3 247 61.1
HPP92_009555 Vanilla planifolia HOM05D004724 ORTHO05D005734 3.3e-75 286.2 459 40.5
FAN07G2095 Fragaria x ananassa HOM05D004724 ORTHO05D005734 5.2e-73 278.9 424 42.0
Phvul.003G043100 Phaseolus vulgaris HOM05D004724 ORTHO05D005734 2.9e-71 273.1 416 42.1
Zm00001eb108470 Zea mays HOM05D004724 ORTHO05D005734 4.1e-70 269.2 369 41.7
FAN17G2607 Fragaria x ananassa HOM05D004724 ORTHO05D005734 1.2e-69 267.7 434 40.6
Os07g0599000 Oryza sativa ssp. japonica HOM05D004724 ORTHO05D005734 4.6e-69 265.8 366 42.6
CiPaw.06G092100 Carya illinoinensis HOM05D004724 ORTHO05D005734 1.0e-68 264.6 402 42.8
Hund25184 Selenicereus undatus HOM05D004724 ORTHO05D005734 4.3e-67 259.2 379 42.5
SHI32884 Sapria himalayana HOM05D004724 ORTHO05D005734 9.5e-67 258.1 229 59.4
Aqoxy3G03611 Aquilegia oxysepala HOM05D004724 ORTHO05D005734 2.8e-66 256.5 373 42.1
SGA_v2.0_scaffold287G47167 Striga asiatica HOM05D004724 ORTHO05D005734 1.4e-65 254.2 228 59.2
CDE04G2698 Ceratophyllum demersum HOM05D004724 ORTHO05D005734 2.4e-65 253.4 427 37.7
Zm00001eb326730 Zea mays HOM05D004724 ORTHO05D005734 2.0e-64 250.4 365 39.5
Solyc05g012390.4 Solanum lycopersicum HOM05D004724 ORTHO05D005734 3.2e-62 243.0 324 42.9
DCAR_027465 Daucus carota HOM05D004724 ORTHO05D005734 3.9e-60 236.1 337 43.3
GSVIVG01028487001 Vitis vinifera HOM05D004724 ORTHO05D005734 1.5e-59 234.2 231 56.3
SEGI_02789 Sequoiadendron giganteum HOM05D004724 ORTHO05D005734 7.3e-59 231.9 246 51.6
GSVIVG01021735001 Vitis vinifera HOM05D004724 ORTHO05D005734 3.1e-57 226.5 231 55.4
EL10Ac5g12464 Beta vulgaris HOM05D004724 ORTHO05D005734 9.0e-57 224.9 260 50.0
VMungo1215G0095 Vigna mungo HOM05D004724 ORTHO05D005734 1.5e-56 224.2 416 37.7
Ah.02g126900 Amaranthus hybridus HOM05D004724 ORTHO05D005734 1.2e-48 198.0 238 47.5
CDE07G1937 Ceratophyllum demersum HOM05D004724 ORTHO05D005734 2.5e-43 180.3 245 43.7
SHI32782 Sapria himalayana HOM05D004724 ORTHO05D005734 2.1e-42 177.2 410 32.7
GSVIVG01009940001 Vitis vinifera HOM05D004724 ORTHO05D005734 6.2e-34 149.1 104 69.2
Actinidia32302 Actinidia chinensis HOM05D004724 ORTHO05D005734 1.5e-32 144.4 135 62.2
Cpa.g.sc1.117 Carica papaya HOM05D004724 ORTHO05D005734 1.6e-29 134.4 205 42.0
Mapoly0002s0313 Marchantia polymorpha HOM05D004724 ORTHO05D005734 1.3e-28 131.3 365 26.6
AagrBONN_evm.TU.Sc2ySwM_117.2858 Anthoceros agrestis HOM05D004724 ORTHO05D005734 6.7e-28 129.0 371 25.3
Actinidia32301 Actinidia chinensis HOM05D004724 ORTHO05D005734 8.7e-28 128.6 99 65.7
Medtr6g024415 Medicago truncatula HOM05D004724 ORTHO05D005734 1.4e-20 104.8 108 53.7
Actinidia32300 Actinidia chinensis HOM05D004724 ORTHO05D007268 2.8e-18 97.1 85 60.0
Ah.02g126910 Amaranthus hybridus HOM05D004724 ORTHO05D005734 2.8e-18 97.1 107 48.6
Nitab4.5_0011966g0020 Nicotiana tabacum HOM05D004724 ORTHO05D005734 4.1e-17 93.2 270 29.6
SHI32882 Sapria himalayana HOM05D004724 ORTHO05D005734 3.2e-14 83.6 104 48.1
SEGI_03319 Sequoiadendron giganteum HOM05D004724 ORTHO05D005734 6.1e-13 79.3 96 41.7
C07p19370 Brassica napus HOM05D004724 ORTHO05D005734 7.9e-13 79.0 85 47.1
Pp3c14_20030 Physcomitrium patens HOM05D004724 ORTHO05D005734 8.8e-12 75.5 238 25.6
CDE07G0543 Ceratophyllum demersum HOM05D004724 ORTHO05D005734 2.6e-11 73.9 68 54.4
A07p12930 Brassica napus HOM05D004724 ORTHO05D005734 7.0e-09 65.9 68 50.0
BraA07t29066Z Brassica rapa HOM05D004724 ORTHO05D005734 7.0e-09 65.9 68 50.0
Gohir.D12G165066 Gossypium hirsutum HOM05D004724 ORTHO05D005734 1.5e-08 64.7 55 54.5
BolC7t42456H Brassica oleracea HOM05D004724 ORTHO05D005734 7.7e-08 62.4 68 48.5
CBR_g55790 Chara braunii HOM05D004724 ORTHO05D005734 1.0e-07 62.0 265 22.3
Nn4g24499 Nelumbo nucifera HOM05D000723 ORTHO05D278618 1.1e-06 58.5 94 39.4
Pp3c1_28760 Physcomitrium patens HOM05D004724 ORTHO05D005734 1.9e-06 57.8 234 22.2


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