Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040584 Camellia sinensis var. sinensis HOM05D005298 ORTHO05D008015 3.0e-145 518.5 255 100.0
CSS0017624 Camellia sinensis var. sinensis HOM05D005298 ORTHO05D008015 1.5e-128 463.0 228 100.0
Rhsim04G0246500 Rhododendron simsii HOM05D005298 ORTHO05D008015 3.1e-110 402.1 226 85.4
Dinv29532 Davidia involucrata HOM05D005298 ORTHO05D008015 9.1e-102 374.0 228 78.9
Hma1.2p1_0013F.1_g008000 Hydrangea macrophylla HOM05D005298 ORTHO05D008015 2.2e-92 342.8 228 71.1
TAR362G0426 Trochodendron aralioides HOM05D005298 ORTHO05D008015 1.9e-91 339.7 227 70.5
Lj3A839G57 Lonicera japonica HOM05D005298 ORTHO05D008015 3.6e-90 335.5 220 73.2
GSVIVG01017664001 Vitis vinifera HOM05D005298 ORTHO05D008015 1.5e-88 330.1 218 70.6
QL06p013696 Quercus lobata HOM05D005298 ORTHO05D008015 1.3e-87 327.0 218 71.6
Potri.010G152700 Populus trichocarpa HOM05D005298 ORTHO05D008015 2.4e-86 322.8 220 67.7
Sabra10G0117500 Salix brachista HOM05D005298 ORTHO05D008015 2.4e-86 322.8 220 67.3
Ciclev10004217m.g Citrus clementina HOM05D005298 ORTHO05D008015 4.1e-86 322.0 219 69.9
Prupe.1G109100 Prunus persica HOM05D005298 ORTHO05D008015 4.1e-86 322.0 229 66.8
Cfa015712 Carpinus fangiana HOM05D005298 ORTHO05D008015 5.3e-86 321.6 228 69.7
Haze_00801 Corylus avellana HOM05D005298 ORTHO05D008015 7.0e-86 321.2 228 69.3
DCAR_002539 Daucus carota HOM05D005298 ORTHO05D008015 1.6e-85 320.1 220 68.2
RcHm_v2.0_Chr4g0426661 Rosa chinensis HOM05D005298 ORTHO05D008015 2.0e-85 319.7 220 66.4
Aqoxy2G02567 Aquilegia oxysepala HOM05D005298 ORTHO05D008015 1.0e-84 317.4 220 68.2
CAN.G14.34 Capsicum annuum HOM05D005298 ORTHO05D008015 2.2e-84 316.2 227 66.1
PGSC0003DMG400012034 Solanum tuberosum HOM05D005298 ORTHO05D008015 3.8e-84 315.5 227 63.9
FvH4_4g21110 Fragaria vesca HOM05D005298 ORTHO05D008015 1.1e-83 313.9 220 65.5
Peaxi162Scf00126g10123 Petunia axillaris HOM05D005298 ORTHO05D008015 1.1e-83 313.9 227 63.0
Sed0008409 Sechium edule HOM05D005298 ORTHO05D008015 1.1e-83 313.9 225 62.7
FAN07G1807 Fragaria x ananassa HOM05D005298 ORTHO05D008015 1.5e-83 313.5 220 65.5
MBI18_g28901_MAGBIO Magnolia biondii HOM05D005298 ORTHO05D008015 1.5e-83 313.5 228 65.4
FAN17G0175 Fragaria x ananassa HOM05D005298 ORTHO05D008015 1.9e-83 313.2 220 65.5
CiPaw.01G131300 Carya illinoinensis HOM05D005298 ORTHO05D008015 4.2e-83 312.0 218 68.3
MD16G1139700 Malus domestica HOM05D005298 ORTHO05D008015 5.5e-83 311.6 220 65.5
ClCG06G004280 Citrullus lanatus HOM05D005298 ORTHO05D008015 7.2e-83 311.2 232 61.2
CsaV3_6G000130 Cucumis sativus L. HOM05D005298 ORTHO05D008015 7.2e-83 311.2 221 62.4
Nitab4.5_0000992g0090 Nicotiana tabacum HOM05D005298 ORTHO05D008015 2.1e-82 309.7 228 64.5
Solyc01g057520.4 Solanum lycopersicum HOM05D005298 ORTHO05D008015 4.7e-82 308.5 227 63.4
Sopen01g022220 Solanum pennellii HOM05D005298 ORTHO05D008015 4.7e-82 308.5 227 63.0
Thecc.04G309800 Theobroma cacao HOM05D005298 ORTHO05D008015 2.3e-81 306.2 219 65.3
MELO3C021240.2 Cucumis melo HOM05D005298 ORTHO05D008015 3.0e-81 305.8 221 61.5
Oeu020287.1 Olea europaea HOM05D005298 ORTHO05D008015 4.0e-81 305.4 226 64.6
Nitab4.5_0000169g0140 Nicotiana tabacum HOM05D005298 ORTHO05D008015 1.2e-80 303.9 228 63.6
Atru.chr4.3122 Acer truncatum HOM05D005298 ORTHO05D008015 1.5e-80 303.5 218 66.1
MD15G1386700 Malus domestica HOM05D005298 ORTHO05D008015 2.6e-80 302.8 220 64.1
Manes.15G003700 Manihot esculenta HOM05D005298 ORTHO05D008015 3.4e-80 302.4 219 63.5
PGR004G2663 Punica granatum HOM05D005298 ORTHO05D008015 1.7e-79 300.1 229 64.2
arahy.Tifrunner.gnm1.ann1.WSVI3W Arachis hypogaea HOM05D005298 ORTHO05D008015 6.3e-79 298.1 219 62.6
Nn3g21868 Nelumbo nucifera HOM05D005298 ORTHO05D008015 8.3e-79 297.7 217 62.2
arahy.Tifrunner.gnm1.ann1.68EF5E Arachis hypogaea HOM05D005298 ORTHO05D008015 1.1e-78 297.4 219 62.6
COL.COLO4_34539 Corchorus olitorius HOM05D005298 ORTHO05D008015 1.4e-78 297.0 218 62.8
Duzib151G1192 Durio zibethinus HOM05D005298 ORTHO05D008015 2.0e-77 293.1 219 61.6
Ca_21388_v3 Cicer arietinum L. HOM05D005298 ORTHO05D008015 3.5e-77 292.4 220 63.2
vmacro07993 Vaccinium macrocarpon HOM05D005298 ORTHO05D008015 4.5e-77 292.0 226 67.3
Cpa.g.sc146.46 Carica papaya HOM05D005298 ORTHO05D008015 5.9e-77 291.6 218 63.3
Medtr4g123670 Medicago truncatula HOM05D005298 ORTHO05D008015 1.3e-76 290.4 220 63.2
TPR.G12648 Trifolium pratense HOM05D005298 ORTHO05D008015 2.3e-76 289.7 220 63.2
Glyma.17G038500 Glycine max HOM05D005298 ORTHO05D008015 2.9e-76 289.3 219 60.7
Psat0ss1196g0600 Pisum sativum HOM05D005298 ORTHO05D008015 2.9e-76 289.3 217 63.1
Gohir.D02G063000 Gossypium hirsutum HOM05D005298 ORTHO05D008015 5.0e-76 288.5 219 60.3
Gorai.005G070900 Gossypium raimondii HOM05D005298 ORTHO05D008015 6.6e-76 288.1 219 60.3
Lj4g0022536 Lotus japonicus HOM05D005298 ORTHO05D008015 8.6e-76 287.7 218 61.0
Glyma.07G233500 Glycine max HOM05D005298 ORTHO05D008015 1.9e-75 286.6 216 61.1
Lalb_Chr07g0181831 Lupinus albus HOM05D005298 ORTHO05D008015 2.5e-75 286.2 219 61.6
Gohir.A02G057201 Gossypium hirsutum HOM05D005298 ORTHO05D008015 7.2e-75 284.6 219 59.8
PSO210G1072 Papaver somniferum HOM05D005298 ORTHO05D008015 2.8e-74 282.7 220 62.7
Phvul.003G119400 Phaseolus vulgaris HOM05D005298 ORTHO05D008015 6.1e-74 281.6 220 57.3
ATR0796G315 Amborella trichopoda HOM05D005298 ORTHO05D008015 1.0e-73 280.8 220 58.2
EL10Ac3g06277 Beta vulgaris HOM05D005298 ORTHO05D008015 1.2e-72 277.3 219 59.4
TWI09G0537 Tripterygium wilfordii HOM05D005298 ORTHO05D008015 9.8e-72 274.2 229 59.0
VMungo1215G2609 Vigna mungo HOM05D005298 ORTHO05D008015 4.9e-71 271.9 220 56.4
AUR62002576 Chenopodium quinoa HOM05D005298 ORTHO05D008015 1.7e-68 263.5 208 60.1
Eucgr.H04107 Eucalyptus grandis HOM05D005298 ORTHO05D008015 9.5e-67 257.7 219 59.8
ECA233G2380 Erigeron canadensis HOM05D005298 ORTHO05D008015 8.0e-66 254.6 232 56.9
Ah.07g203800 Amaranthus hybridus HOM05D005298 ORTHO05D008015 4.9e-63 245.4 216 54.6
Thhalv10019950m.g Eutrema salsugineum HOM05D005298 ORTHO05D008015 1.1e-62 244.2 220 50.9
Sp3g15510 Schrenkiella parvula HOM05D005298 ORTHO05D008015 1.1e-62 244.2 220 50.9
Zm00001eb164790 Zea mays HOM05D005298 ORTHO05D008015 1.4e-62 243.8 221 50.7
CANSAT78G1118 Cannabis sativa HOM05D005298 ORTHO05D008015 3.2e-62 242.7 216 55.1
Os11g0695900 Oryza sativa ssp. japonica HOM05D005298 ORTHO05D008015 3.2e-62 242.7 221 49.3
BolC5t33645H Brassica oleracea HOM05D005298 ORTHO05D008015 1.2e-61 240.7 223 50.2
BcaC05g28796 Brassica carinata HOM05D005298 ORTHO05D008015 3.5e-61 239.2 221 50.2
C05p49050 Brassica napus HOM05D005298 ORTHO05D008015 6.0e-61 238.4 221 50.7
Aa31LG8G4260 Aethionema arabicum HOM05D005298 ORTHO05D008015 1.0e-60 237.7 220 50.5
AT3G17340 Arabidopsis thaliana HOM05D005298 ORTHO05D008015 1.3e-60 237.3 220 49.1
A05p32420 Brassica napus HOM05D005298 ORTHO05D008015 2.3e-60 236.5 221 50.2
BraA05t22069Z Brassica rapa HOM05D005298 ORTHO05D008015 2.3e-60 236.5 221 50.2
Carub.0003s1705 Capsella rubella HOM05D005298 ORTHO05D008015 6.6e-60 235.0 220 51.4
AUR62029998 Chenopodium quinoa HOM05D005298 ORTHO05D008015 3.3e-59 232.6 177 60.5
AL3G30390 Arabidopsis lyrata HOM05D005298 ORTHO05D008015 7.3e-59 231.5 220 49.1
CARHR092650 Cardamine hirsuta HOM05D005298 ORTHO05D008015 7.3e-59 231.5 220 50.0
Lsat_1_v5_gn_6_69380 Lactuca sativa HOM05D005298 ORTHO05D008015 8.1e-58 228.0 228 52.2
HanXRQChr09g0251541 Helianthus annuus HOM05D005298 ORTHO05D008015 6.8e-57 224.9 223 50.7
Actinidia18497 Actinidia chinensis HOM05D005298 ORTHO05D008015 1.7e-55 220.3 228 54.4
SEGI_25654 Sequoiadendron giganteum HOM05D005298 ORTHO05D008015 4.9e-55 218.8 226 47.3
SMO200G0212 Selaginella moellendorffii HOM05D005298 ORTHO05D008015 9.9e-48 194.5 224 42.9
GSVIVG01017599001 Vitis vinifera HOM05D005298 ORTHO05D008015 6.4e-47 191.8 125 71.2
Mapoly0002s0222 Marchantia polymorpha HOM05D005298 ORTHO05D008015 6.8e-41 171.8 239 37.7
Pp3c27_6680 Physcomitrium patens HOM05D005298 ORTHO05D008015 1.4e-38 164.1 229 36.7
Pp3c21_7100 Physcomitrium patens HOM05D005298 ORTHO05D008015 1.9e-35 153.7 244 36.9
Pp3c21_7106 Physcomitrium patens HOM05D005298 ORTHO05D008015 1.9e-35 153.7 244 36.9
Pp3c1_32943 Physcomitrium patens HOM05D005298 ORTHO05D008015 3.2e-30 136.3 251 31.1
ATR0757G088 Amborella trichopoda HOM05D005298 ORTHO05D023441 1.6e-29 134.0 119 51.3
Pp3c1_32940 Physcomitrium patens HOM05D005298 ORTHO05D008015 4.6e-29 132.5 236 31.4
ATR0457G001 Amborella trichopoda HOM05D005298 ORTHO05D023441 1.8e-25 120.6 108 50.9
Mapoly0011s0083 Marchantia polymorpha HOM05D005298 ORTHO05D008015 3.8e-23 112.8 238 29.8
ATR0605G314 Amborella trichopoda HOM05D005298 ORTHO05D023441 4.2e-22 109.4 92 53.3
GSVIVG01017600001 Vitis vinifera HOM05D005298 ORTHO05D008015 6.2e-18 95.5 60 70.0
Zm00001eb183920 Zea mays HOM05D005298 ORTHO05D030733 1.4e-17 94.4 78 53.8
ATR0049G027 Amborella trichopoda HOM05D005298 ORTHO05D023441 1.9e-14 84.0 65 56.9
Zm00001eb385420 Zea mays HOM05D005298 ORTHO05D030733 1.9e-14 84.0 78 50.0
Zm00001eb383150 Zea mays HOM05D005298 ORTHO05D030733 2.8e-10 70.1 61 52.5
Zm00001eb082360 Zea mays HOM05D005298 ORTHO05D030733 3.7e-10 69.7 61 52.5
ATR0820G007 Amborella trichopoda HOM05D005298 ORTHO05D023441 9.3e-06 55.1 67 41.8


User provided reference genes

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