Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040556 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 1.1e-90 336.7 175 100.0
Dinv13509 Davidia involucrata HOM05D004708 ORTHO05D005573 3.2e-74 282.0 173 82.1
Actinidia19193 Actinidia chinensis HOM05D004708 ORTHO05D005573 3.0e-72 275.4 173 80.3
Atru.chr3.607 Acer truncatum HOM05D004708 ORTHO05D005573 8.8e-72 273.9 167 82.6
CSS0030971 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 8.8e-72 273.9 173 80.9
Cpa.g.sc6.137 Carica papaya HOM05D004708 ORTHO05D005573 1.5e-71 273.1 172 79.7
Ciclev10026600m.g Citrus clementina HOM05D004708 ORTHO05D005573 7.4e-71 270.8 172 79.1
vmacro17822 Vaccinium macrocarpon HOM05D004708 ORTHO05D005573 7.4e-71 270.8 173 78.6
Nitab4.5_0000136g0310 Nicotiana tabacum HOM05D004708 ORTHO05D005573 9.7e-71 270.4 169 78.1
Peaxi162Scf00008g03516 Petunia axillaris HOM05D004708 ORTHO05D005573 1.7e-70 269.6 170 79.4
Thecc.03G010200 Theobroma cacao HOM05D004708 ORTHO05D005573 1.7e-70 269.6 172 79.1
Duzib084G0089 Durio zibethinus HOM05D004708 ORTHO05D005573 2.2e-70 269.2 172 79.1
Prupe.7G156900 Prunus persica HOM05D004708 ORTHO05D005573 4.8e-70 268.1 172 79.7
MD02G1144700 Malus domestica HOM05D004708 ORTHO05D005573 6.3e-70 267.7 172 79.7
QL06p046600 Quercus lobata HOM05D004708 ORTHO05D005573 8.2e-70 267.3 166 80.7
MD15G1258400 Malus domestica HOM05D004708 ORTHO05D005573 7.0e-69 264.2 175 77.1
MSTRG.23511 Avicennia marina HOM05D004708 ORTHO05D005573 9.1e-69 263.8 167 77.8
Gohir.A09G170800 Gossypium hirsutum HOM05D004708 ORTHO05D005573 9.1e-69 263.8 167 78.4
Manes.01G136850 Manihot esculenta HOM05D004708 ORTHO05D005573 9.1e-69 263.8 165 78.2
HanXRQChr09g0261341 Helianthus annuus HOM05D004708 ORTHO05D005573 1.5e-68 263.1 161 82.0
Hma1.2p1_0224F.1_g094553 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 2.0e-68 262.7 171 76.0
Rhsim08G0118600 Rhododendron simsii HOM05D004708 ORTHO05D005573 2.0e-68 262.7 173 76.9
Sopen02g013670 Solanum pennellii HOM05D004708 ORTHO05D005573 2.0e-68 262.7 169 75.7
COL.COLO4_34048 Corchorus olitorius HOM05D004708 ORTHO05D005573 2.6e-68 262.3 172 76.2
Gorai.006G188300 Gossypium raimondii HOM05D004708 ORTHO05D005573 4.5e-68 261.5 167 77.2
Lsat_1_v5_gn_4_148240 Lactuca sativa HOM05D004708 ORTHO05D005573 5.9e-68 261.2 158 81.6
SalBow6G2211 Salvia bowleyana HOM05D004708 ORTHO05D005573 7.7e-68 260.8 165 77.0
Cc07_g09720 Coffea canephora HOM05D004708 ORTHO05D005573 1.3e-67 260.0 171 75.4
Solyc02g062640.4 Solanum lycopersicum HOM05D004708 ORTHO05D005573 1.3e-67 260.0 168 75.6
Carub.0003s3243 Capsella rubella HOM05D004708 ORTHO05D005573 1.7e-67 259.6 170 75.9
TWI53G1618 Tripterygium wilfordii HOM05D004708 ORTHO05D005573 2.2e-67 259.2 169 75.7
CiPaw.01G043700 Carya illinoinensis HOM05D004708 ORTHO05D005573 2.9e-67 258.8 175 75.4
Hund16439 Selenicereus undatus HOM05D004708 ORTHO05D005573 2.9e-67 258.8 160 76.9
AT2G18250 Arabidopsis thaliana HOM05D004708 ORTHO05D005573 3.8e-67 258.5 161 78.3
ClCG05G006010 Citrullus lanatus HOM05D000319 ORTHO05D000903 3.8e-67 258.5 167 76.6
Aa31LG8G15760 Aethionema arabicum HOM05D004708 ORTHO05D005573 6.5e-67 257.7 160 78.8
PGSC0003DMG400015508 Solanum tuberosum HOM05D004708 ORTHO05D005573 6.5e-67 257.7 165 76.4
Thecc.01G032800 Theobroma cacao HOM05D004708 ORTHO05D005573 8.5e-67 257.3 176 74.4
AL3G51520 Arabidopsis lyrata HOM05D004708 ORTHO05D005573 1.5e-66 256.5 161 77.6
CAN.G111.48 Capsicum annuum HOM05D004708 ORTHO05D005573 1.5e-66 256.5 167 75.4
CsaV3_3G014460 Cucumis sativus L. HOM05D004708 ORTHO05D005573 1.9e-66 256.1 168 77.4
DCAR_023857 Daucus carota HOM05D004708 ORTHO05D005573 1.9e-66 256.1 158 79.1
Migut.H00962 Erythranthe guttata HOM05D004708 ORTHO05D005573 1.9e-66 256.1 170 77.1
Sc16g0002660 Simmondsia chinensis HOM05D004708 ORTHO05D005573 1.9e-66 256.1 176 72.2
GSVIVG01025946001 Vitis vinifera HOM05D004708 ORTHO05D005573 1.9e-66 256.1 168 76.2
MELO3C006648.2 Cucumis melo HOM05D004708 ORTHO05D005573 4.2e-66 255.0 167 77.2
Gorai.008G067200 Gossypium raimondii HOM05D004708 ORTHO05D005573 4.2e-66 255.0 161 77.0
Thhalv10022875m.g Eutrema salsugineum HOM05D004708 ORTHO05D005573 1.2e-65 253.4 161 76.4
Hma1.2p1_0789F.1_g218250 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 1.6e-65 253.1 175 74.3
Potri.005G121200 Populus trichocarpa HOM05D004708 ORTHO05D005573 2.1e-65 252.7 173 74.6
AUR62004070 Chenopodium quinoa HOM05D004708 ORTHO05D005573 3.6e-65 251.9 160 76.2
ECA232G2192 Erigeron canadensis HOM05D004708 ORTHO05D005573 3.6e-65 251.9 161 78.9
Manes.02G095600 Manihot esculenta HOM05D004708 ORTHO05D005573 3.6e-65 251.9 170 73.5
Duzib264G1087 Durio zibethinus HOM05D004708 ORTHO05D005573 6.1e-65 251.1 161 77.0
COL.COLO4_22050 Corchorus olitorius HOM05D004708 ORTHO05D005573 8.0e-65 250.8 167 76.6
DCAR_032374 Daucus carota HOM05D004708 ORTHO05D005573 8.0e-65 250.8 163 74.2
CARHR108820 Cardamine hirsuta HOM05D004708 ORTHO05D005573 1.0e-64 250.4 161 75.8
BcaB07g31677 Brassica carinata HOM05D004708 ORTHO05D005573 1.4e-64 250.0 166 74.1
EL10Ac6g15543 Beta vulgaris HOM05D004708 ORTHO05D005573 2.3e-64 249.2 173 71.1
GSVIVG01018936001 Vitis vinifera HOM05D004708 ORTHO05D005573 2.3e-64 249.2 163 73.0
BcaC04g22917 Brassica carinata HOM05D004708 ORTHO05D005573 3.9e-64 248.4 157 76.4
FvH4_1g13011 Fragaria vesca HOM05D004708 ORTHO05D005573 3.9e-64 248.4 174 73.0
CAN.G1645.15 Capsicum annuum HOM05D004708 ORTHO05D005573 5.2e-64 248.1 165 75.2
Aqoxy3G01739 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 8.8e-64 247.3 170 71.8
BolC9t54282H Brassica oleracea HOM05D004708 ORTHO05D005573 8.8e-64 247.3 157 75.8
Sp3g31670 Schrenkiella parvula HOM05D004708 ORTHO05D005573 1.1e-63 246.9 161 74.5
PGR119G0658 Punica granatum HOM05D004708 ORTHO05D005573 3.3e-63 245.4 174 73.6
BcaC06g36391 Brassica carinata HOM05D004708 ORTHO05D005573 5.7e-63 244.6 158 75.9
AUR62007583 Chenopodium quinoa HOM05D004708 ORTHO05D005573 5.7e-63 244.6 160 75.0
A07p02450 Brassica napus HOM05D004708 ORTHO05D005573 7.4e-63 244.2 157 75.8
BraA07t28041Z Brassica rapa HOM05D004708 ORTHO05D005573 7.4e-63 244.2 157 75.8
BcaB03g16615 Brassica carinata HOM05D004708 ORTHO05D005573 9.7e-63 243.8 161 75.2
RcHm_v2.0_Chr2g0101171 Rosa chinensis HOM05D004708 ORTHO05D005573 9.7e-63 243.8 172 72.1
SGA_v2.0_scaffold258G45779 Striga asiatica HOM05D004708 ORTHO05D005573 1.3e-62 243.4 174 70.7
BolC7t40861H Brassica oleracea HOM05D004708 ORTHO05D005573 6.3e-62 241.1 158 75.3
Aqoxy5G01592 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 1.1e-61 240.4 167 71.3
C07p04600 Brassica napus HOM05D004708 ORTHO05D005573 1.4e-61 240.0 158 74.7
Lsat_1_v5_gn_2_77221 Lactuca sativa HOM05D004708 ORTHO05D005573 1.8e-61 239.6 168 73.8
Hund13990 Selenicereus undatus HOM05D004708 ORTHO05D005573 1.8e-61 239.6 171 67.3
unitig_21.g20250 Utricularia gibba HOM05D004708 ORTHO05D005573 1.6e-60 236.5 154 74.7
THA.LOC104807464 Tarenaya hassleriana HOM05D004708 ORTHO05D005573 1.7e-59 233.0 183 65.6
Lj2g0001027 Lotus japonicus HOM05D002605 ORTHO05D002842 2.9e-59 232.3 170 68.2
MD15G1258500 Malus domestica HOM05D004708 ORTHO05D005573 5.0e-59 231.5 172 68.6
PSO764G0091 Papaver somniferum HOM05D004708 ORTHO05D005573 1.5e-58 229.9 155 72.9
Psat2g158360 Pisum sativum HOM05D004708 ORTHO05D005573 3.2e-58 228.8 170 66.5
Ca_24863_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 4.2e-58 228.4 158 72.2
Medtr5g020680 Medicago truncatula HOM05D004708 ORTHO05D005573 7.2e-58 227.6 170 66.5
Zm00001eb231510 Zea mays HOM05D004708 ORTHO05D005573 7.2e-58 227.6 171 64.9
ATR0796G251 Amborella trichopoda HOM05D004708 ORTHO05D005573 2.7e-57 225.7 164 68.9
Dinv39998 Davidia involucrata HOM05D004708 ORTHO05D005573 3.6e-57 225.3 175 69.1
ECA238G4849 Erigeron canadensis HOM05D004708 ORTHO05D005573 4.7e-57 224.9 169 67.5
FAN25G0668 Fragaria x ananassa HOM05D004708 ORTHO05D005573 4.7e-57 224.9 167 68.9
VMungo1215G3002 Vigna mungo HOM05D004708 ORTHO05D005573 4.7e-57 224.9 174 63.8
TPR.G2405 Trifolium pratense HOM05D004708 ORTHO05D005573 8.0e-57 224.2 170 65.3
Ca_21297_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 1.0e-56 223.8 158 70.9
Medtr8g073890 Medicago truncatula HOM05D004708 ORTHO05D005573 1.0e-56 223.8 155 71.6
arahy.Tifrunner.gnm1.ann1.CZ32YF Arachis hypogaea HOM05D004708 ORTHO05D005573 1.4e-56 223.4 170 67.1
Sabra05G0099900 Salix brachista HOM05D004708 ORTHO05D005573 1.4e-56 223.4 218 58.7
Glyma.01G173050 Glycine max HOM05D004708 ORTHO05D005573 2.3e-56 222.6 159 68.6
Lalb_Chr05g0212721 Lupinus albus HOM05D004708 ORTHO05D005573 3.0e-56 222.2 158 69.6
FAN19G0555 Fragaria x ananassa HOM05D004708 ORTHO05D005573 4.0e-56 221.9 207 60.4
PSO339G0290 Papaver somniferum HOM05D004708 ORTHO05D005573 5.2e-56 221.5 153 71.9
Gohir.A12G064100 Gossypium hirsutum HOM05D004708 ORTHO05D005573 6.8e-56 221.1 161 70.8
arahy.Tifrunner.gnm1.ann1.Y7U3HW Arachis hypogaea HOM05D004708 ORTHO05D005573 1.2e-55 220.3 170 65.3
arahy.Tifrunner.gnm1.ann1.V6C6W3 Arachis hypogaea HOM05D004708 ORTHO05D005573 1.5e-55 219.9 170 65.9
SEGI_37374 Sequoiadendron giganteum HOM05D004708 ORTHO05D005573 4.4e-55 218.4 168 65.5
Phvul.002G032200 Phaseolus vulgaris HOM05D004708 ORTHO05D005573 5.7e-55 218.0 158 66.5
Hma1.2p1_1820F.1_g304110 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 2.2e-54 216.1 139 78.4
FAN21G0333 Fragaria x ananassa HOM05D004708 ORTHO05D005573 4.8e-54 214.9 171 63.7
TAR624G0473 Trochodendron aralioides HOM05D004708 ORTHO05D005573 1.4e-53 213.4 155 68.4
Gohir.D09G166500 Gossypium hirsutum HOM05D004708 ORTHO05D005573 2.4e-53 212.6 172 66.3
Os07g0179400 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 9.1e-53 210.7 157 64.3
arahy.Tifrunner.gnm1.ann1.KFYL3R Arachis hypogaea HOM05D004708 ORTHO05D005573 2.0e-52 209.5 170 64.7
CDE12G0116 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 4.5e-52 208.4 170 64.1
CDE01G0816 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 6.5e-51 204.5 152 68.4
HPP92_014750 Vanilla planifolia HOM05D004708 ORTHO05D005573 1.9e-50 203.0 150 64.7
BcaC04g22919 Brassica carinata HOM05D004708 ORTHO05D005573 1.0e-48 197.2 185 57.3
C09p13900 Brassica napus HOM05D004708 ORTHO05D005573 5.2e-48 194.9 157 63.7
Pp3c18_16890 Physcomitrium patens HOM05D004708 ORTHO05D005573 6.8e-48 194.5 154 63.0
FvH4_3g26020 Fragaria vesca HOM05D004708 ORTHO05D005573 8.8e-48 194.1 138 68.8
Glyma.02G276900 Glycine max HOM05D004708 ORTHO05D005573 2.6e-47 192.6 135 66.7
SMO357G0013 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 1.3e-46 190.3 154 63.6
SMO318G0001 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 3.7e-46 188.7 170 58.8
A09p11790 Brassica napus HOM05D004708 ORTHO05D005573 1.8e-45 186.4 130 70.0
CARHR108850 Cardamine hirsuta HOM05D004708 ORTHO05D005573 1.2e-44 183.7 120 73.3
Lj2A454G55 Lonicera japonica HOM05D004708 ORTHO05D005573 3.3e-42 175.6 143 67.1
CSS0019358 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 9.5e-42 174.1 115 80.9
Gohir.D12G064000 Gossypium hirsutum HOM05D004708 ORTHO05D005573 2.1e-41 172.9 107 73.8
Peaxi162Scf00130g00618 Petunia axillaris HOM05D004708 ORTHO05D005573 4.7e-41 171.8 170 55.3
Mapoly0065s0018 Marchantia polymorpha HOM05D004708 ORTHO05D005573 6.1e-41 171.4 160 57.5
Nitab4.5_0009165g0010 Nicotiana tabacum HOM05D000001 ORTHO05D013582 5.2e-40 168.3 105 81.0
FAN11G2897 Fragaria x ananassa HOM05D004708 ORTHO05D009899 4.9e-38 161.8 168 55.4
Zm00001eb301320 Zea mays HOM05D004708 ORTHO05D005573 9.2e-37 157.5 153 53.6
PSO731G0046 Papaver somniferum HOM05D004708 ORTHO05D005573 1.6e-36 156.8 112 70.5
PSO384G2349 Papaver somniferum HOM05D004708 ORTHO05D005573 2.0e-36 156.4 154 57.1
CBR_g4476 Chara braunii HOM05D003322 ORTHO05D004228 2.8e-33 146.0 158 48.7
Os02g0134000 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 1.8e-32 143.3 113 64.6
Nn7g38122 Nelumbo nucifera HOM05D004708 ORTHO05D005573 5.2e-32 141.7 107 62.6
BraA09t36827Z Brassica rapa HOM05D004708 ORTHO05D005573 2.2e-30 136.3 99 71.7
CAN.G2875.1 Capsicum annuum HOM05D004708 ORTHO05D005573 4.9e-30 135.2 101 72.3
Actinidia33865 Actinidia chinensis HOM05D004708 ORTHO05D005573 4.1e-29 132.1 92 78.3
AagrBONN_evm.TU.Sc2ySwM_228.2017 Anthoceros agrestis HOM05D004708 ORTHO05D005573 6.6e-27 124.8 113 61.9
FAN26G2067 Fragaria x ananassa HOM05D004708 ORTHO05D005573 1.5e-26 123.6 84 67.9
Pp3c18_18790 Physcomitrium patens HOM05D004708 ORTHO05D005573 6.8e-24 114.8 154 43.5
Cre13.g590550 Chlamydomonas reinhardtii HOM05D004708 ORTHO05D005573 6.4e-22 108.2 175 36.0
HanXRQChr17g0534461 Helianthus annuus HOM05D004708 ORTHO05D005573 5.4e-21 105.1 62 80.6
arahy.Tifrunner.gnm1.ann1.W5EA8A Arachis hypogaea HOM05D004708 ORTHO05D005573 1.3e-19 100.5 88 64.8
CAN.G53.14 Capsicum annuum HOM05D004708 ORTHO05D005573 5.1e-19 98.6 60 73.3
AagrBONN_evm.TU.Sc2ySwM_368.1168 Anthoceros agrestis HOM05D004708 ORTHO05D005573 1.6e-17 93.6 66 72.7
SGA_v2.0_scaffold276G46612 Striga asiatica HOM05D004708 ORTHO05D005573 1.1e-16 90.9 116 50.9
C09p74780 Brassica napus HOM05D004708 ORTHO05D005573 2.6e-15 86.3 58 74.1
C09p74830 Brassica napus HOM05D004708 ORTHO05D005573 2.6e-15 86.3 58 74.1
CAN.G53.15 Capsicum annuum HOM05D004708 ORTHO05D005573 1.7e-14 83.6 59 76.3
MCO08G231 Micromonas commoda HOM05D004708 ORTHO05D005573 1.7e-14 83.6 150 34.7
BcaC06g36392 Brassica carinata HOM05D000492 ORTHO05D005571 4.1e-13 79.0 52 75.0
PRCOL_00004729 Prasinoderma coloniale HOM05D004708 ORTHO05D005573 3.0e-11 72.8 156 34.0
Oeu044133.1 Olea europaea HOM05D004708 ORTHO05D005573 1.1e-10 70.9 45 73.3
Actinidia12710 Actinidia chinensis HOM05D004708 ORTHO05D005573 3.6e-09 65.9 48 64.6


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