Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040514 Camellia sinensis var. sinensis HOM05D001126 ORTHO05D012932 4.4e-43 177.6 89 100.0
CSS0025159 Camellia sinensis var. sinensis HOM05D001126 ORTHO05D012932 2.9e-39 164.9 89 95.5
CSS0027414 Camellia sinensis var. sinensis HOM05D001126 ORTHO05D000991 8.8e-36 153.3 89 88.8
CSS0019716 Camellia sinensis var. sinensis HOM05D001126 ORTHO05D012932 2.0e-32 142.1 89 83.1
CSS0047077 Camellia sinensis var. sinensis HOM05D001126 ORTHO05D012932 1.2e-21 106.3 108 57.4
CSS0041374 Camellia sinensis var. sinensis HOM05D001126 ORTHO05D012932 3.1e-17 91.7 89 58.4
CSS0006314 Camellia sinensis var. sinensis HOM05D001126 ORTHO05D012932 2.5e-14 82.0 89 55.1
Dinv03970 Davidia involucrata HOM05D001126 ORTHO05D000991 2.8e-13 78.6 85 54.1
Dinv06808 Davidia involucrata HOM05D001126 ORTHO05D000991 2.8e-13 78.6 85 54.1
Dinv21624 Davidia involucrata HOM05D001126 ORTHO05D000991 2.8e-13 78.6 85 52.9
Dinv06803 Davidia involucrata HOM05D001126 ORTHO05D000991 3.6e-13 78.2 85 55.3
Hma1.2p1_1814F.1_g303920 Hydrangea macrophylla HOM05D001126 ORTHO05D012932 2.3e-12 75.5 89 51.7
Actinidia02123 Actinidia chinensis HOM05D001126 ORTHO05D000991 4.0e-12 74.7 85 50.6
Hma1.2p1_0916F.1_g236460 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 6.8e-12 73.9 88 48.9
Hma1.2p1_1395F.1_g280480 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 3.4e-11 71.6 88 47.7
Hma1.2p1_1395F.1_g280520 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 3.4e-11 71.6 87 48.3
Rhsim04G0033400 Rhododendron simsii HOM05D001126 ORTHO05D000991 9.8e-11 70.1 84 48.8
vmacro23133 Vaccinium macrocarpon HOM05D001126 ORTHO05D000991 1.3e-10 69.7 85 47.1
Actinidia35915 Actinidia chinensis HOM05D001126 ORTHO05D000991 1.7e-10 69.3 77 54.5
Dinv10278 Davidia involucrata HOM05D001126 ORTHO05D000991 1.7e-10 69.3 77 53.2
Hma1.2p1_1395F.1_g280470 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 1.7e-10 69.3 84 45.2
Hma1.2p1_1430F.1_g282950 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 1.7e-10 69.3 80 51.2
Hma1.2p1_1395F.1_g280460 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 3.7e-10 68.2 88 47.7
Dinv21625 Davidia involucrata HOM05D001126 ORTHO05D000991 4.9e-10 67.8 85 54.1
Rhsim07G0176400 Rhododendron simsii HOM05D001126 ORTHO05D000991 4.9e-10 67.8 83 48.2
Hma1.2p1_1395F.1_g280490 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 6.3e-10 67.4 88 46.6
Hma1.2p1_1635F.1_g294810 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 6.3e-10 67.4 85 50.6
Rhsim11G0051500 Rhododendron simsii HOM05D001126 ORTHO05D000991 8.3e-10 67.0 83 49.4
Hma1.2p1_3173F.1_g333590 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 1.8e-09 65.9 85 48.2
Hma1.2p1_1814F.1_g303925 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 2.4e-09 65.5 88 45.5
Hma1.2p1_1990F.1_g310170 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 2.4e-09 65.5 88 45.5
Hma1.2p1_1990F.1_g310180 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 2.4e-09 65.5 88 45.5
Rhsim04G0107300 Rhododendron simsii HOM05D001126 ORTHO05D000991 2.4e-09 65.5 84 45.2
Actinidia35914 Actinidia chinensis HOM05D001126 ORTHO05D000991 4.1e-09 64.7 77 49.4
Rhsim04G0107100 Rhododendron simsii HOM05D001126 ORTHO05D000991 4.1e-09 64.7 80 48.8
Actinidia35911 Actinidia chinensis HOM05D003490 ORTHO05D000991 7.0e-09 63.9 86 45.3
TAR629G0685 Trochodendron aralioides HOM05D001126 ORTHO05D000991 9.2e-09 63.5 73 50.7
Hma1.2p1_2031F.1_g311810 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 1.2e-08 63.2 79 49.4
Rhsim04G0106900 Rhododendron simsii HOM05D001126 ORTHO05D000991 1.6e-08 62.8 83 47.0
Hma1.2p1_1814F.1_g303930 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 2.7e-08 62.0 88 44.3
Rhsim04G0107800 Rhododendron simsii HOM05D001126 ORTHO05D000991 2.7e-08 62.0 83 47.0
Hma1.2p1_1814F.1_g303910 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 3.5e-08 61.6 85 44.7
Cfa007765 Carpinus fangiana HOM05D001126 ORTHO05D000991 4.5e-08 61.2 85 47.1
Dinv21623 Davidia involucrata HOM05D001126 ORTHO05D000991 4.5e-08 61.2 52 65.4
Hma1.2p1_0916F.1_g236495 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 4.5e-08 61.2 71 50.7
Lj2C216T3 Lonicera japonica HOM05D001126 ORTHO05D000991 4.5e-08 61.2 58 56.9
Hma1.2p1_3357F.1_g335540 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 5.9e-08 60.8 88 44.3
Haze_14308 Corylus avellana HOM05D001126 ORTHO05D000991 7.8e-08 60.5 85 45.9
Migut.O00103 Erythranthe guttata HOM05D001126 ORTHO05D000991 1.3e-07 59.7 75 49.3
Atru.chr9.1328 Acer truncatum HOM05D001126 ORTHO05D000991 1.7e-07 59.3 86 43.0
Hma1.2p1_0916F.1_g236480 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 1.7e-07 59.3 68 52.9
CiPaw.11G153000 Carya illinoinensis HOM05D001126 ORTHO05D000991 2.9e-07 58.5 85 43.5
ECA248G2329 Erigeron canadensis HOM05D001126 ORTHO05D000991 2.9e-07 58.5 75 42.7
TWI81G0441 Tripterygium wilfordii HOM05D001126 ORTHO05D000991 5.0e-07 57.8 85 41.2
vmacro02651 Vaccinium macrocarpon HOM05D001126 ORTHO05D012932 5.0e-07 57.8 55 52.7
Hma1.2p1_1635F.1_g294780 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 6.6e-07 57.4 58 53.4
ECA248G3845 Erigeron canadensis HOM05D001126 ORTHO05D000991 8.6e-07 57.0 75 42.7
Migut.O00111 Erythranthe guttata HOM05D001126 ORTHO05D000991 8.6e-07 57.0 60 50.0
Lsat_1_v5_gn_1_46280 Lactuca sativa HOM05D001126 ORTHO05D000991 8.6e-07 57.0 77 42.9
Lj8C261T5 Lonicera japonica HOM05D001126 ORTHO05D012932 8.6e-07 57.0 57 56.1
Oeu016891.1 Olea europaea HOM05D001126 ORTHO05D000991 8.6e-07 57.0 85 38.8
Oeu016895.1 Olea europaea HOM05D001126 ORTHO05D000991 8.6e-07 57.0 85 37.6
Rhsim04G0107200 Rhododendron simsii HOM05D001126 ORTHO05D000991 8.6e-07 57.0 85 42.4
Dinv06805 Davidia involucrata HOM05D001126 ORTHO05D000991 1.1e-06 56.6 51 62.7
Dinv21539 Davidia involucrata HOM05D001126 ORTHO05D000991 1.1e-06 56.6 85 45.9
Rhsim04G0107500 Rhododendron simsii HOM05D001126 ORTHO05D000991 1.1e-06 56.6 85 42.4
Cpa.g.sc29.141 Carica papaya HOM05D001126 ORTHO05D000991 1.5e-06 56.2 84 39.3
ECA248G2315 Erigeron canadensis HOM05D001126 ORTHO05D000991 1.5e-06 56.2 80 38.8
Hma1.2p1_1814F.1_g303900 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 1.5e-06 56.2 71 47.9
Hma1.2p1_2370F.1_g320790 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 1.5e-06 56.2 71 47.9
Lsat_1_v5_gn_1_46340 Lactuca sativa HOM05D001126 ORTHO05D000991 1.5e-06 56.2 75 44.0
Migut.O00102 Erythranthe guttata HOM05D001126 ORTHO05D000991 1.9e-06 55.8 87 42.5
Lj8C261T1 Lonicera japonica HOM05D001126 ORTHO05D000991 1.9e-06 55.8 85 43.5
Rhsim04G0107000 Rhododendron simsii HOM05D001126 ORTHO05D000991 1.9e-06 55.8 85 41.2
Lsat_1_v5_gn_1_46400 Lactuca sativa HOM05D001126 ORTHO05D000991 2.5e-06 55.5 85 40.0
Lsat_1_v5_gn_6_39441 Lactuca sativa HOM05D001126 ORTHO05D000991 2.5e-06 55.5 61 50.8
Lj2C216T2 Lonicera japonica HOM05D001126 ORTHO05D000991 2.5e-06 55.5 85 41.2
Duzib205G0781 Durio zibethinus HOM05D001126 ORTHO05D000991 3.3e-06 55.1 86 39.5
Lsat_1_v5_gn_1_46500 Lactuca sativa HOM05D001126 ORTHO05D000991 3.3e-06 55.1 79 41.8
ECA248G2886 Erigeron canadensis HOM05D001126 ORTHO05D000991 4.3e-06 54.7 80 43.8
Lsat_1_v5_gn_1_43181 Lactuca sativa HOM05D001126 ORTHO05D000991 4.3e-06 54.7 79 40.5
Lsat_1_v5_gn_1_43221 Lactuca sativa HOM05D001126 ORTHO05D000991 4.3e-06 54.7 88 42.0
Lsat_1_v5_gn_1_46240 Lactuca sativa HOM05D001126 ORTHO05D000991 4.3e-06 54.7 75 44.0
Rhsim04G0107700 Rhododendron simsii HOM05D001126 ORTHO05D000991 4.3e-06 54.7 65 47.7
HanXRQChr17g0545681 Helianthus annuus HOM05D001126 ORTHO05D000991 5.6e-06 54.3 75 41.3
Lsat_1_v5_gn_6_39901 Lactuca sativa HOM05D001126 ORTHO05D000991 5.6e-06 54.3 61 49.2
Actinidia05201 Actinidia chinensis HOM05D001126 ORTHO05D000991 7.3e-06 53.9 61 47.5
ECA234G4035 Erigeron canadensis HOM05D001126 ORTHO05D000991 7.3e-06 53.9 53 50.9
Lj8C261T3 Lonicera japonica HOM05D001126 ORTHO05D000991 7.3e-06 53.9 48 54.2
Hma1.2p1_1635F.1_g294800 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 9.5e-06 53.5 52 55.8
Hma1.2p1_3207F.1_g333980 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 9.5e-06 53.5 52 55.8
SGA_v2.0_scaffold25G10833 Striga asiatica HOM05D001126 ORTHO05D000991 9.5e-06 53.5 79 41.8


User provided reference genes

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