Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040499 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.3e-196 689.5 343 100.0
CSS0004781 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 8.3e-183 643.7 343 95.0
Dinv35002 Davidia involucrata HOM05D006434 ORTHO05D008069 3.3e-147 525.4 344 79.1
Rhsim10G0029400 Rhododendron simsii HOM05D006434 ORTHO05D008069 2.8e-138 495.7 345 76.2
vmacro05779 Vaccinium macrocarpon HOM05D006434 ORTHO05D008069 6.2e-138 494.6 337 76.0
Actinidia06053 Actinidia chinensis HOM05D006434 ORTHO05D008069 5.3e-137 491.5 335 77.6
TAR629G3263 Trochodendron aralioides HOM05D006434 ORTHO05D008069 1.0e-132 477.2 343 72.6
GSVIVG01032566001 Vitis vinifera HOM05D006434 ORTHO05D008069 1.2e-128 463.8 344 72.1
CAN.G1128.11 Capsicum annuum HOM05D006434 ORTHO05D008069 6.4e-127 458.0 336 72.6
PGSC0003DMG400006900 Solanum tuberosum HOM05D006434 ORTHO05D008069 4.2e-126 455.3 336 71.7
Cfa007492 Carpinus fangiana HOM05D006434 ORTHO05D008069 1.3e-124 450.3 347 69.7
Nn1g08819 Nelumbo nucifera HOM05D006434 ORTHO05D008069 3.9e-124 448.7 337 68.5
Nitab4.5_0001727g0150 Nicotiana tabacum HOM05D006434 ORTHO05D008069 3.9e-124 448.7 336 71.4
Solyc02g067540.3 Solanum lycopersicum HOM05D006434 ORTHO05D008069 8.7e-124 447.6 336 71.1
Sopen02g016670 Solanum pennellii HOM05D006434 ORTHO05D008069 8.7e-124 447.6 336 71.1
Atru.chr8.2465 Acer truncatum HOM05D006434 ORTHO05D008069 4.3e-123 445.3 300 73.7
Hma1.2p1_0136F.1_g062090 Hydrangea macrophylla HOM05D006434 ORTHO05D008069 2.1e-122 443.0 275 78.9
COL.COLO4_36989 Corchorus olitorius HOM05D006434 ORTHO05D008069 6.9e-121 438.0 337 68.0
Ciclev10012231m.g Citrus clementina HOM05D006434 ORTHO05D008069 1.7e-119 433.3 328 68.3
Eucgr.I01896 Eucalyptus grandis HOM05D006434 ORTHO05D008069 2.2e-119 433.0 291 73.5
CANSAT64G2331 Cannabis sativa HOM05D006434 ORTHO05D008069 4.9e-119 431.8 336 66.7
TWI56G0494 Tripterygium wilfordii HOM05D006434 ORTHO05D008069 4.9e-119 431.8 335 69.0
Sed0011674 Sechium edule HOM05D006434 ORTHO05D008069 6.4e-119 431.4 337 67.1
CsaV3_5G037720 Cucumis sativus L. HOM05D006434 ORTHO05D008069 8.4e-119 431.0 336 66.7
PGR142G2438 Punica granatum HOM05D006434 ORTHO05D008069 1.4e-118 430.3 338 67.2
Potri.001G349800 Populus trichocarpa HOM05D006434 ORTHO05D008069 5.5e-118 428.3 339 68.4
MELO3C021484.2 Cucumis melo HOM05D006434 ORTHO05D008069 1.6e-117 426.8 332 67.2
Thecc.04G069300 Theobroma cacao HOM05D006434 ORTHO05D008069 1.6e-117 426.8 348 65.2
Duzib264G0249 Durio zibethinus HOM05D006434 ORTHO05D008069 6.0e-117 424.9 348 64.4
MD09G1042700 Malus domestica HOM05D006434 ORTHO05D008069 3.0e-116 422.5 347 65.7
Manes.15G178000 Manihot esculenta HOM05D006434 ORTHO05D008069 3.9e-116 422.2 339 66.7
Cc07_g02850 Coffea canephora HOM05D006434 ORTHO05D008069 8.7e-116 421.0 334 67.1
QL02p079411 Quercus lobata HOM05D006434 ORTHO05D008069 1.5e-115 420.2 332 67.5
Gohir.A07G216800 Gossypium hirsutum HOM05D006434 ORTHO05D008069 1.9e-115 419.9 336 66.7
Peaxi162Scf00059g00128 Petunia axillaris HOM05D006434 ORTHO05D008069 7.4e-115 417.9 335 66.3
Aqoxy3G00846 Aquilegia oxysepala HOM05D006434 ORTHO05D008069 2.8e-114 416.0 328 65.2
Oeu022866.3 Olea europaea HOM05D006434 ORTHO05D008069 2.8e-114 416.0 373 62.2
Gorai.001G257900 Gossypium raimondii HOM05D006434 ORTHO05D008069 4.8e-114 415.2 338 66.3
Gohir.D07G223600 Gossypium hirsutum HOM05D006434 ORTHO05D008069 6.2e-114 414.8 338 66.3
Sabra16G0229200 Salix brachista HOM05D006434 ORTHO05D008069 1.4e-113 413.7 338 67.2
Migut.H00876 Erythranthe guttata HOM05D006434 ORTHO05D008069 1.8e-113 413.3 312 70.8
Lj2g0012157 Lotus japonicus HOM05D006434 ORTHO05D008069 2.2e-111 406.4 346 65.6
RcHm_v2.0_Chr2g0169691 Rosa chinensis HOM05D006434 ORTHO05D008069 2.2e-111 406.4 339 64.3
Phvul.004G023900 Phaseolus vulgaris HOM05D006434 ORTHO05D008069 6.5e-111 404.8 336 66.7
FvH4_6g49670 Fragaria vesca HOM05D006434 ORTHO05D008069 3.2e-110 402.5 336 64.6
AUR62018326 Chenopodium quinoa HOM05D006434 ORTHO05D008069 4.2e-110 402.1 333 65.2
FAN14G5872 Fragaria x ananassa HOM05D006434 ORTHO05D008069 5.5e-110 401.7 335 65.1
ATR0665G567 Amborella trichopoda HOM05D006434 ORTHO05D008069 7.1e-110 401.4 317 65.6
CiPaw.03G032300 Carya illinoinensis HOM05D006434 ORTHO05D008069 7.1e-110 401.4 307 68.4
FAN02G4063 Fragaria x ananassa HOM05D006434 ORTHO05D008069 6.0e-109 398.3 345 63.5
PSO161G0076 Papaver somniferum HOM05D006434 ORTHO05D008069 6.0e-109 398.3 287 69.3
FAN05G1688 Fragaria x ananassa HOM05D006434 ORTHO05D008069 1.8e-108 396.7 336 64.3
arahy.Tifrunner.gnm1.ann1.ICRE53 Arachis hypogaea HOM05D006434 ORTHO05D008069 3.0e-108 396.0 334 66.2
arahy.Tifrunner.gnm1.ann1.X2C98S Arachis hypogaea HOM05D006434 ORTHO05D008069 3.0e-108 396.0 338 66.3
MSTRG.23964 Avicennia marina HOM05D006434 ORTHO05D008069 5.1e-108 395.2 299 69.6
ECA232G4812 Erigeron canadensis HOM05D006434 ORTHO05D008069 8.7e-108 394.4 317 63.7
Sc10g0004040 Simmondsia chinensis HOM05D006434 ORTHO05D008069 1.1e-107 394.0 266 73.3
Medtr6g009400 Medicago truncatula HOM05D006434 ORTHO05D008069 2.5e-107 392.9 338 65.4
TPR.G32608 Trifolium pratense HOM05D006434 ORTHO05D008069 3.3e-107 392.5 333 64.3
Lsat_1_v5_gn_4_180280 Lactuca sativa HOM05D006434 ORTHO05D008069 5.7e-107 391.7 325 65.2
PSO478G2838 Papaver somniferum HOM05D006434 ORTHO05D008069 7.4e-107 391.3 337 61.4
SGA_v2.0_scaffold205G41750 Striga asiatica HOM05D006434 ORTHO05D008069 7.4e-107 391.3 334 63.2
CSS0001127 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.3e-106 390.6 239 82.4
Glyma.13G066900 Glycine max HOM05D006434 ORTHO05D008069 2.8e-106 389.4 295 67.8
EL10Ac2g02902 Beta vulgaris HOM05D006434 ORTHO05D008069 3.7e-106 389.0 350 62.0
Lalb_Chr21g0319131 Lupinus albus HOM05D006434 ORTHO05D008069 2.0e-104 383.3 344 63.4
Carub.0005s0699 Capsella rubella HOM05D006434 ORTHO05D008069 2.6e-104 382.9 332 63.6
DCAR_006717 Daucus carota HOM05D006434 ORTHO05D008069 4.5e-104 382.1 243 77.8
CSS0033350 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.0e-103 380.9 231 83.5
HanXRQChr15g0488521 Helianthus annuus HOM05D006434 ORTHO05D008069 1.7e-103 380.2 267 71.9
AL5G18090 Arabidopsis lyrata HOM05D006434 ORTHO05D008069 2.9e-103 379.4 328 62.5
ClCG09G018520 Citrullus lanatus HOM05D006434 ORTHO05D008069 2.9e-103 379.4 311 65.3
VMungo0464G0451 Vigna mungo HOM05D006434 ORTHO05D008069 4.2e-102 375.6 337 62.6
Aa31LG2G4610 Aethionema arabicum HOM05D006434 ORTHO05D008069 1.2e-101 374.0 358 58.9
AUR62030560 Chenopodium quinoa HOM05D006434 ORTHO05D008069 1.2e-101 374.0 345 59.4
Sp2g17230 Schrenkiella parvula HOM05D006434 ORTHO05D008069 3.0e-100 369.4 287 67.2
unitig_744.g24344 Utricularia gibba HOM05D006434 ORTHO05D008069 2.0e-99 366.7 271 70.1
Thhalv10004634m.g Eutrema salsugineum HOM05D006434 ORTHO05D008069 2.5e-99 366.3 330 62.7
BolC7t44265H Brassica oleracea HOM05D006434 ORTHO05D008069 3.3e-99 365.9 333 61.0
THA.LOC104823923 Tarenaya hassleriana HOM05D006434 ORTHO05D008069 3.3e-99 365.9 336 59.8
A06p40510 Brassica napus HOM05D006434 ORTHO05D008069 5.7e-99 365.2 327 62.1
BraA06t26970Z Brassica rapa HOM05D006434 ORTHO05D008069 5.7e-99 365.2 327 62.1
CDE02G1577 Ceratophyllum demersum HOM05D006434 ORTHO05D008069 5.7e-99 365.2 311 59.8
C07p37520 Brassica napus HOM05D006434 ORTHO05D008069 1.7e-98 363.6 333 60.7
BcaC06g33735 Brassica carinata HOM05D006434 ORTHO05D008069 1.1e-97 360.9 337 58.8
CARHR292500 Cardamine hirsuta HOM05D006434 ORTHO05D008069 1.8e-97 360.1 324 60.5
Haze_14607 Corylus avellana HOM05D006434 ORTHO05D008069 3.1e-97 359.4 309 64.4
Psat1g076480 Pisum sativum HOM05D006434 ORTHO05D008069 3.4e-96 355.9 290 64.1
FAN09G0258 Fragaria x ananassa HOM05D006434 ORTHO05D008069 7.7e-96 354.8 316 60.8
Prupe.3G275100 Prunus persica HOM05D006434 ORTHO05D008069 9.4e-94 347.8 291 65.3
Os03g0736400 Oryza sativa ssp. japonica HOM05D006434 ORTHO05D008069 8.8e-92 341.3 308 59.4
Glyma.19G017500 Glycine max HOM05D006434 ORTHO05D008069 7.4e-91 338.2 208 78.8
HPP92_023566 Vanilla planifolia HOM05D006434 ORTHO05D008069 1.3e-90 337.4 280 62.1
Lj7A404T37 Lonicera japonica HOM05D006434 ORTHO05D008069 8.2e-82 308.1 239 69.5
Cpa.g.sc14.62 Carica papaya HOM05D006434 ORTHO05D008069 1.8e-81 307.0 187 80.2
Nitab4.5_0003431g0070 Nicotiana tabacum HOM05D006434 ORTHO05D008069 2.4e-81 306.6 187 78.6
Ca_04243_v3 Cicer arietinum L. HOM05D006434 ORTHO05D008069 3.1e-81 306.2 225 67.6
SalBow1G5247 Salvia bowleyana HOM05D006434 ORTHO05D008069 4.1e-81 305.8 305 55.1
AT3G28460 Arabidopsis thaliana HOM05D006434 ORTHO05D008069 1.0e-79 301.2 283 60.1
CSS0043817 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 2.9e-79 299.7 198 77.8
Zm00001eb215320 Zea mays HOM05D006434 ORTHO05D008069 4.0e-76 289.3 273 57.1
Pp3c7_630 Physcomitrium patens HOM05D006434 ORTHO05D008069 1.2e-64 251.1 243 54.3
AagrBONN_evm.TU.Sc2ySwM_344.3988 Anthoceros agrestis HOM05D006434 ORTHO05D008069 2.3e-63 246.9 205 60.5
SMO171G0075 Selaginella moellendorffii HOM05D006434 ORTHO05D008069 1.1e-62 244.6 212 57.5
MBI01_g13068_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 2.8e-61 240.0 221 58.4
Hund13291 Selenicereus undatus HOM05D006434 ORTHO05D008069 2.8e-58 229.9 241 57.7
Mapoly0140s0031 Marchantia polymorpha HOM05D006434 ORTHO05D008069 1.6e-56 224.2 218 53.2
CBR_g31858 Chara braunii HOM05D006434 ORTHO05D008069 2.7e-48 196.8 266 43.6
SEGI_25544 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 2.9e-42 176.8 256 45.3
PRCOL_00006620 Prasinoderma coloniale HOM05D006434 ORTHO05D008069 3.9e-39 166.4 218 40.4
SEGI_38692 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 7.3e-38 162.2 136 59.6
Cre13.g566300 Chlamydomonas reinhardtii HOM05D006434 ORTHO05D008069 1.6e-37 161.0 211 40.8
MBI01_g13070_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 2.4e-33 147.1 92 75.0
MCO03G139 Micromonas commoda HOM05D006434 ORTHO05D008069 7.3e-30 135.6 120 52.5
Solyc01g057060.1 Solanum lycopersicum HOM05D006434 ORTHO05D008069 9.6e-30 135.2 94 70.2
Sopen01g021310 Solanum pennellii HOM05D006434 ORTHO05D008069 8.1e-29 132.1 86 75.6
TAR371G0222 Trochodendron aralioides HOM05D006434 ORTHO05D008069 3.8e-26 123.2 196 44.4
MD17G1044100 Malus domestica HOM05D006434 ORTHO05D008069 1.2e-24 118.2 60 95.0
Lj7A404T38 Lonicera japonica HOM05D006434 ORTHO05D008069 2.4e-12 77.4 147 36.7
Cpa.g.sc14.61 Carica papaya HOM05D006434 ORTHO05D008069 6.4e-10 69.3 126 44.4
Lsat_1_v5_gn_7_34121 Lactuca sativa HOM05D006434 ORTHO05D008069 1.9e-09 67.8 37 83.8
Actinidia36050 Actinidia chinensis HOM05D006434 ORTHO05D053052 9.6e-06 55.5 26 88.5


User provided reference genes

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