Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040497 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 6.7e-51 203.8 105 100.0
CSS0045153 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 7.2e-45 183.7 105 92.4
CSS0001505 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 1.8e-35 152.5 100 87.0
CSS0015603 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 5.1e-35 151.0 106 80.2
CSS0016211 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 9.7e-34 146.7 106 79.2
CSS0049977 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 1.7e-30 136.0 100 79.0
vmacro05819 Vaccinium macrocarpon HOM05D007293 ORTHO05D009143 6.1e-28 127.5 103 68.9
Dinv33495 Davidia involucrata HOM05D007293 ORTHO05D009143 4.0e-27 124.8 111 64.9
Rhsim10G0022800 Rhododendron simsii HOM05D007293 ORTHO05D009143 9.7e-26 120.2 103 67.0
Dinv35058 Davidia involucrata HOM05D007293 ORTHO05D009143 4.8e-25 117.9 110 60.9
MSTRG.24016 Avicennia marina HOM05D007293 ORTHO05D009143 5.9e-23 110.9 106 63.2
Migut.K01369 Erythranthe guttata HOM05D007293 ORTHO05D009143 5.9e-23 110.9 107 64.5
Cc07_g02290 Coffea canephora HOM05D007293 ORTHO05D009143 7.2e-21 104.0 102 59.8
Migut.H00123 Erythranthe guttata HOM05D007293 ORTHO05D009143 9.4e-21 103.6 107 60.7
GSVIVG01032483001 Vitis vinifera HOM05D007293 ORTHO05D009143 3.6e-20 101.7 111 56.8
Lj7A591G78 Lonicera japonica HOM05D007293 ORTHO05D009143 6.1e-20 100.9 110 60.0
Oeu062917.1 Olea europaea HOM05D007293 ORTHO05D009143 1.4e-19 99.8 100 59.0
DCAR_011205 Daucus carota HOM05D007293 ORTHO05D009143 2.8e-17 92.0 108 54.6
Actinidia06026 Actinidia chinensis HOM05D007293 ORTHO05D009143 3.1e-16 88.6 57 77.2
Hma1.2p1_0802F.1_g220360 Hydrangea macrophylla HOM05D007293 ORTHO05D009143 1.6e-15 86.3 107 57.9
SalBow1G2453 Salvia bowleyana HOM05D005882 ORTHO05D009143 7.7e-15 84.0 95 56.8
Lsat_1_v5_gn_4_182280 Lactuca sativa HOM05D007293 ORTHO05D009143 1.7e-14 82.8 107 50.5
TWI75G0451 Tripterygium wilfordii HOM05D007293 ORTHO05D009143 6.5e-14 80.9 110 50.0
ECA246G2262 Erigeron canadensis HOM05D007293 ORTHO05D009143 1.1e-13 80.1 101 54.5
HanXRQChr08g0220621 Helianthus annuus HOM05D007293 ORTHO05D009143 1.1e-13 80.1 108 53.7
PGR119G0124 Punica granatum HOM05D007293 ORTHO05D009143 1.5e-13 79.7 108 48.1
THA.LOC104808972 Tarenaya hassleriana HOM05D007293 ORTHO05D009143 3.2e-13 78.6 106 48.1
MD16G1092500 Malus domestica HOM05D007293 ORTHO05D009143 1.2e-12 76.6 107 49.5
Sp5g25470 Schrenkiella parvula HOM05D007293 ORTHO05D009143 1.6e-12 76.3 106 46.2
Atru.chr11.2025 Acer truncatum HOM05D007293 ORTHO05D009143 2.7e-12 75.5 105 47.6
Ciclev10033010m.g Citrus clementina HOM05D007293 ORTHO05D009143 2.7e-12 75.5 107 47.7
MD13G1091900 Malus domestica HOM05D007293 ORTHO05D009143 2.7e-12 75.5 111 49.5
THA.LOC104822141 Tarenaya hassleriana HOM05D007293 ORTHO05D009143 2.7e-12 75.5 106 48.1
Psat0s2875g0160 Pisum sativum HOM05D007293 ORTHO05D009143 4.7e-12 74.7 106 48.1
Manes.13G030700 Manihot esculenta HOM05D007293 ORTHO05D009143 2.3e-11 72.4 113 47.8
RcHm_v2.0_Chr4g0443841 Rosa chinensis HOM05D007293 ORTHO05D009143 2.3e-11 72.4 111 46.8
BcaC08g45820 Brassica carinata HOM05D007293 ORTHO05D009143 3.0e-11 72.0 105 44.8
Thhalv10019350m.g Eutrema salsugineum HOM05D007293 ORTHO05D009143 4.0e-11 71.6 106 43.4
Nn3g16892 Nelumbo nucifera HOM05D007293 ORTHO05D009143 4.0e-11 71.6 47 74.5
Psat2g106240 Pisum sativum HOM05D007293 ORTHO05D009143 4.0e-11 71.6 106 46.2
RcHm_v2.0_Chr4g0443851 Rosa chinensis HOM05D007293 ORTHO05D009143 4.0e-11 71.6 105 45.7
Thecc.02G249100 Theobroma cacao HOM05D007293 ORTHO05D009143 4.0e-11 71.6 106 47.2
Carub.0002s1704 Capsella rubella HOM05D007293 ORTHO05D009143 5.2e-11 71.2 108 46.3
FAN17G1887 Fragaria x ananassa HOM05D007293 ORTHO05D009143 5.2e-11 71.2 105 43.8
FAN22G1529 Fragaria x ananassa HOM05D007293 ORTHO05D009143 5.2e-11 71.2 105 43.8
CiPaw.05G150900 Carya illinoinensis HOM05D007293 ORTHO05D009143 6.8e-11 70.9 106 50.0
EL10Ac6g13673 Beta vulgaris HOM05D007293 ORTHO05D009143 8.8e-11 70.5 105 46.7
FvH4_4g34460 Fragaria vesca HOM05D007293 ORTHO05D009143 8.8e-11 70.5 105 43.8
FAN12G1260 Fragaria x ananassa HOM05D007293 ORTHO05D009143 8.8e-11 70.5 105 43.8
CANSAT01G1482 Cannabis sativa HOM05D007293 ORTHO05D009143 1.2e-10 70.1 105 45.7
Cfa009144 Carpinus fangiana HOM05D007293 ORTHO05D009143 1.2e-10 70.1 106 47.2
CDE06G2495 Ceratophyllum demersum HOM05D007293 ORTHO05D009143 1.2e-10 70.1 105 45.7
Aqoxy3G02974 Aquilegia oxysepala HOM05D007293 ORTHO05D009143 1.5e-10 69.7 110 46.4
AT1G70350 Arabidopsis thaliana HOM05D007293 ORTHO05D009143 1.5e-10 69.7 108 45.4
Phvul.002G071600 Phaseolus vulgaris HOM05D007293 ORTHO05D009143 2.0e-10 69.3 106 47.2
AL2G29660 Arabidopsis lyrata HOM05D007293 ORTHO05D009143 2.6e-10 68.9 108 44.4
CARHR063530 Cardamine hirsuta HOM05D007293 ORTHO05D009143 2.6e-10 68.9 108 44.4
Prupe.1G253900 Prunus persica HOM05D007293 ORTHO05D009143 3.4e-10 68.6 105 44.8
Hund05995 Selenicereus undatus HOM05D007293 ORTHO05D009143 3.4e-10 68.6 106 46.2
TAR622G0242 Trochodendron aralioides HOM05D007293 ORTHO05D009143 3.4e-10 68.6 107 47.7
Gohir.D02G162700 Gossypium hirsutum HOM05D007293 ORTHO05D009143 4.4e-10 68.2 107 47.7
Gorai.005G182700 Gossypium raimondii HOM05D007293 ORTHO05D009143 4.4e-10 68.2 107 47.7
Gohir.A03G139900 Gossypium hirsutum HOM05D007293 ORTHO05D009143 5.7e-10 67.8 107 47.7
CDE04G1122 Ceratophyllum demersum HOM05D007293 ORTHO05D009143 1.3e-09 66.6 105 44.8
A02p16490 Brassica napus HOM05D007293 ORTHO05D009143 1.7e-09 66.2 108 43.5
BraA02t06707Z Brassica rapa HOM05D007293 ORTHO05D009143 1.7e-09 66.2 108 43.5
ClCG08G018060 Citrullus lanatus HOM05D007293 ORTHO05D009143 2.2e-09 65.9 107 47.7
BcaB03g15542 Brassica carinata HOM05D007293 ORTHO05D009143 2.8e-09 65.5 107 43.0
BcaC03g15179 Brassica carinata HOM05D007293 ORTHO05D009143 4.9e-09 64.7 109 43.1
Glyma.02G034600 Glycine max HOM05D007293 ORTHO05D009143 4.9e-09 64.7 106 43.4
Lalb_Chr09g0326381 Lupinus albus HOM05D007293 ORTHO05D009143 4.9e-09 64.7 106 42.5
Eucgr.H02610 Eucalyptus grandis HOM05D007293 ORTHO05D009143 6.3e-09 64.3 108 46.3
Lj2g0011400 Lotus japonicus HOM05D007293 ORTHO05D009143 6.3e-09 64.3 110 42.7
BcaB05g24561 Brassica carinata HOM05D007293 ORTHO05D009143 8.3e-09 63.9 106 42.5
BolC6t38732H Brassica oleracea HOM05D007293 ORTHO05D009143 8.3e-09 63.9 99 42.4
AUR62014041 Chenopodium quinoa HOM05D007293 ORTHO05D009143 1.1e-08 63.5 45 66.7
C06p36130 Brassica napus HOM05D007293 ORTHO05D009143 1.4e-08 63.2 99 42.4
HPP92_019952 Vanilla planifolia HOM05D007293 ORTHO05D009143 1.4e-08 63.2 105 42.9
Duzib268G1575 Durio zibethinus HOM05D007293 ORTHO05D009143 2.4e-08 62.4 107 43.9
MBI10_g11075_MAGBIO Magnolia biondii HOM05D007293 ORTHO05D009143 2.4e-08 62.4 56 62.5
TPR.G13591 Trifolium pratense HOM05D007293 ORTHO05D009143 4.1e-08 61.6 106 42.5
C02p27590 Brassica napus HOM05D007293 ORTHO05D009143 7.0e-08 60.8 108 41.7
PSO063G5020 Papaver somniferum HOM05D007293 ORTHO05D009143 7.0e-08 60.8 99 43.4
TPR.G13583 Trifolium pratense HOM05D007293 ORTHO05D009143 7.0e-08 60.8 110 41.8
Prupe.5G015600 Prunus persica HOM05D007293 ORTHO05D009143 9.2e-08 60.5 103 41.7
AUR62005378 Chenopodium quinoa HOM05D007293 ORTHO05D009143 1.6e-07 59.7 93 45.2
Os01g0738000 Oryza sativa ssp. japonica HOM05D007293 ORTHO05D009143 2.7e-07 58.9 108 43.5
COL.COLO4_36768 Corchorus olitorius HOM05D007293 ORTHO05D009143 4.5e-07 58.2 99 41.4
VMungo1215G2593 Vigna mungo HOM05D007293 ORTHO05D009143 4.5e-07 58.2 101 44.6
Haze_12178 Corylus avellana HOM05D007293 ORTHO05D009143 5.9e-07 57.8 105 41.0
PSO832G1108 Papaver somniferum HOM05D007293 ORTHO05D009143 5.9e-07 57.8 99 43.4
BolC2t08814H Brassica oleracea HOM05D007293 ORTHO05D009143 1.3e-06 56.6 108 40.7
A07p31100 Brassica napus HOM05D007293 ORTHO05D009143 2.3e-06 55.8 103 40.8
BraA07t30744Z Brassica rapa HOM05D007293 ORTHO05D009143 2.3e-06 55.8 103 40.8
Duzib251G0045 Durio zibethinus HOM05D007293 ORTHO05D009143 3.8e-06 55.1 103 41.7
CSS0038485 Camellia sinensis var. sinensis HOM05D007491 ORTHO05D009489 5.0e-06 54.7 87 47.1
CARHR088390 Cardamine hirsuta HOM05D007491 ORTHO05D009489 8.6e-06 53.9 104 41.3
Ca_13998_v3 Cicer arietinum L. HOM05D007293 ORTHO05D009143 8.6e-06 53.9 98 39.8


User provided reference genes

Program Settings