Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040470 Camellia sinensis var. sinensis HOM05D008072 ORTHO05D010204 3.9e-57 224.6 113 100.0
Rhsim12G0202400 Rhododendron simsii HOM05D008072 ORTHO05D010204 1.0e-25 120.2 114 64.9
Peaxi162Scf00038g00843 Petunia axillaris HOM05D008072 ORTHO05D010204 4.0e-25 118.2 116 60.3
Dinv37992 Davidia involucrata HOM05D008072 ORTHO05D010204 1.2e-24 116.7 114 62.3
Potri.001G188400 Populus trichocarpa HOM05D008072 ORTHO05D010204 1.5e-24 116.3 115 60.9
Actinidia09003 Actinidia chinensis HOM05D008072 ORTHO05D010204 7.5e-24 114.0 115 57.4
Sabra01G0152600 Salix brachista HOM05D008072 ORTHO05D010204 2.7e-21 105.5 115 56.5
Oeu060494.1 Olea europaea HOM05D008072 ORTHO05D010204 1.3e-20 103.2 114 57.0
Cc04_g02690 Coffea canephora HOM05D008072 ORTHO05D010204 3.0e-20 102.1 120 52.5
PGSC0003DMG400002533 Solanum tuberosum HOM05D008072 ORTHO05D010204 3.9e-20 101.7 116 52.6
Hma1.2p1_3269F.1_g334750 Hydrangea macrophylla HOM05D008072 ORTHO05D010204 1.9e-19 99.4 116 53.4
Prupe.3G061100 Prunus persica HOM05D008072 ORTHO05D010204 1.9e-19 99.4 115 52.2
Sopen03g039710 Solanum pennellii HOM05D008072 ORTHO05D010204 1.9e-19 99.4 116 52.6
QL05p020523 Quercus lobata HOM05D008072 ORTHO05D010204 4.7e-18 94.7 113 49.6
Solyc03g120880.4 Solanum lycopersicum HOM05D004877 ORTHO05D005942 8.0e-18 94.0 113 53.1
MD17G1186400 Malus domestica HOM05D008072 ORTHO05D010204 1.1e-17 93.6 118 46.6
PGR102G0255 Punica granatum HOM05D008072 ORTHO05D010204 1.8e-17 92.8 121 49.6
TAR626G1017 Trochodendron aralioides HOM05D008072 ORTHO05D010204 2.3e-17 92.4 111 54.1
GSVIVG01017012001 Vitis vinifera HOM05D008072 ORTHO05D010204 4.0e-17 91.7 114 50.9
Atru.chr1.3499 Acer truncatum HOM05D008072 ORTHO05D010204 1.2e-16 90.1 124 46.8
Cpa.g.c31416 Carica papaya HOM05D008072 ORTHO05D010204 1.2e-16 90.1 115 47.8
RcHm_v2.0_Chr2g0140071 Rosa chinensis HOM05D008072 ORTHO05D010204 3.4e-16 88.6 117 48.7
TWI18G1284 Tripterygium wilfordii HOM05D008072 ORTHO05D010204 3.4e-16 88.6 115 44.3
SalBow7G3462 Salvia bowleyana HOM05D008072 ORTHO05D010204 4.4e-16 88.2 117 48.7
Thecc.06G097600 Theobroma cacao HOM05D008072 ORTHO05D010204 5.8e-16 87.8 116 48.3
Haze_15831 Corylus avellana HOM05D008072 ORTHO05D010204 9.8e-16 87.0 161 37.3
Lj3g0001751 Lotus japonicus HOM05D008072 ORTHO05D010204 1.3e-15 86.7 114 45.6
FAN02G2294 Fragaria x ananassa HOM05D008072 ORTHO05D010204 1.7e-15 86.3 115 44.3
SGA_v2.0_scaffold4G02017 Striga asiatica HOM05D008072 ORTHO05D010204 2.2e-15 85.9 119 42.0
Aqoxy7G01464 Aquilegia oxysepala HOM05D008072 ORTHO05D010204 3.7e-15 85.1 115 48.7
FvH4_6g32180 Fragaria vesca HOM05D008072 ORTHO05D010204 4.9e-15 84.7 115 43.5
Duzib192G0771 Durio zibethinus HOM05D008072 ORTHO05D010204 6.4e-15 84.3 120 44.2
FAN14G4057 Fragaria x ananassa HOM05D008072 ORTHO05D010204 6.4e-15 84.3 116 43.1
FAN05G4246 Fragaria x ananassa HOM05D008072 ORTHO05D010204 1.1e-14 83.6 115 43.5
FAN09G3706 Fragaria x ananassa HOM05D008072 ORTHO05D010204 1.9e-14 82.8 115 43.5
Glyma.08G202200 Glycine max HOM05D008072 ORTHO05D010204 3.2e-14 82.0 113 43.4
Glyma.07G016900 Glycine max HOM05D008072 ORTHO05D010204 9.2e-14 80.5 115 46.1
Ciclev10026797m.g Citrus clementina HOM05D008072 ORTHO05D010204 1.6e-13 79.7 113 45.1
Manes.04G132700 Manihot esculenta HOM05D008072 ORTHO05D010204 2.0e-13 79.3 117 43.6
Gorai.003G063000 Gossypium raimondii HOM05D008072 ORTHO05D010204 2.7e-13 79.0 102 45.1
MSTRG.9481 Avicennia marina HOM05D008072 ORTHO05D010204 3.5e-13 78.6 116 47.4
Gohir.D03G059100 Gossypium hirsutum HOM05D008072 ORTHO05D010204 4.6e-13 78.2 102 45.1
Psat4g197480 Pisum sativum HOM05D008072 ORTHO05D010204 4.6e-13 78.2 115 42.6
Nitab4.5_0001755g0100 Nicotiana tabacum HOM05D008072 ORTHO05D010204 1.0e-12 77.0 86 54.7
TPR.G35014 Trifolium pratense HOM05D008072 ORTHO05D010204 1.3e-12 76.6 113 42.5
Gohir.A02G118500 Gossypium hirsutum HOM05D008072 ORTHO05D010204 1.7e-12 76.3 102 44.1
Lalb_Chr04g0262911 Lupinus albus HOM05D008072 ORTHO05D010204 2.3e-12 75.9 113 42.5
Sc10g0007210 Simmondsia chinensis HOM05D008072 ORTHO05D010204 2.3e-12 75.9 119 42.9
VMungo0331G2041 Vigna mungo HOM05D008072 ORTHO05D010204 2.3e-12 75.9 118 43.2
Nn2g11609 Nelumbo nucifera HOM05D008072 ORTHO05D010204 6.6e-12 74.3 114 43.9
HanXRQChr16g0501221 Helianthus annuus HOM05D008072 ORTHO05D010204 8.6e-12 73.9 114 42.1
Phvul.010G146400 Phaseolus vulgaris HOM05D008072 ORTHO05D010204 1.5e-11 73.2 118 39.8
Nn8g39117 Nelumbo nucifera HOM05D008072 ORTHO05D010204 2.5e-11 72.4 115 43.5
MD09G1205700 Malus domestica HOM05D008072 ORTHO05D010204 5.6e-11 71.2 113 36.3
Sed0011388 Sechium edule HOM05D008072 ORTHO05D010204 1.2e-10 70.1 112 42.9
Cfa003662 Carpinus fangiana HOM05D008072 ORTHO05D010204 1.6e-10 69.7 96 47.9
ClCG09G000070 Citrullus lanatus HOM05D008072 ORTHO05D010204 1.6e-10 69.7 114 43.0
MELO3C024449.2 Cucumis melo HOM05D008072 ORTHO05D010204 1.8e-09 66.2 112 40.2
CsaV3_7G035400 Cucumis sativus L. HOM05D008072 ORTHO05D010204 2.3e-09 65.9 116 39.7
CANSAT56G4142 Cannabis sativa HOM05D008072 ORTHO05D010204 3.1e-09 65.5 117 41.9
MBI01_g42894_MAGBIO Magnolia biondii HOM05D008072 ORTHO05D010204 5.2e-09 64.7 113 39.8
Medtr8g013930 Medicago truncatula HOM05D008072 ORTHO05D010204 1.5e-08 63.2 114 42.1
EL10Ac9g22100 Beta vulgaris HOM05D008072 ORTHO05D010204 3.4e-08 62.0 116 39.7
ECA232G1650 Erigeron canadensis HOM05D004877 ORTHO05D005942 5.8e-08 61.2 89 40.4
CiPaw.02G146800 Carya illinoinensis HOM05D008072 ORTHO05D010204 1.1e-06 57.0 106 40.6
arahy.Tifrunner.gnm1.ann1.UX9EW1 Arachis hypogaea HOM05D008072 ORTHO05D010204 1.4e-06 56.6 115 35.7
AUR62031887 Chenopodium quinoa HOM05D008072 ORTHO05D010204 1.9e-06 56.2 118 33.9
Lsat_1_v5_gn_4_99940 Lactuca sativa HOM05D008072 ORTHO05D010204 4.1e-06 55.1 105 36.2
Hund06655 Selenicereus undatus HOM05D008072 ORTHO05D010204 7.1e-06 54.3 109 35.8
SEGI_35585 Sequoiadendron giganteum HOM05D008072 ORTHO05D010204 7.1e-06 54.3 56 50.0
Oeu063939.2 Olea europaea HOM05D000181 ORTHO05D008575 9.2e-06 53.9 58 56.9


User provided reference genes

Program Settings