Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040440 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 3.2e-53 211.5 104 100.0
CSS0029699 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 1.2e-47 193.0 104 90.4
CSS0049610 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 5.8e-47 190.7 104 89.4
CSS0002638 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 3.9e-27 124.8 104 64.4
CSS0025139 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 6.7e-27 124.0 104 64.4
CSS0036848 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 1.0e-22 110.2 96 54.2
CSS0024246 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.9e-19 98.2 98 52.0
CSS0013490 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 5.1e-19 97.8 98 51.0
CSS0008839 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-18 96.7 99 47.5
CSS0014976 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.3e-18 95.1 98 50.0
CSS0027326 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-15 86.7 89 48.3
CSS0039886 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.2e-14 82.4 97 41.2
Rhsim03G0084200 Rhododendron simsii HOM05D008183 ORTHO05D007254 2.2e-14 82.4 96 43.8
CSS0013917 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.8e-14 81.6 98 41.8
CSS0012014 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.9e-13 79.3 98 41.8
Rhsim06G0103400 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.5e-13 79.0 96 41.7
Rhsim13G0004500 Rhododendron simsii HOM05D008183 ORTHO05D007254 3.2e-13 78.6 96 41.7
CSS0019282 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.2e-13 78.2 83 44.6
Rhsim01G0155500 Rhododendron simsii HOM05D000003 ORTHO05D007254 5.5e-13 77.8 96 40.6
Rhsim11G0009800 Rhododendron simsii HOM05D000003 ORTHO05D000004 5.5e-13 77.8 97 40.2
CSS0035557 Camellia sinensis var. sinensis HOM05D000036 ORTHO05D000004 7.2e-13 77.4 78 47.4
CSS0007562 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.2e-12 76.6 96 43.8
Lj3P354T13 Lonicera japonica HOM05D008183 ORTHO05D007254 1.6e-12 76.3 92 40.2
Rhsim03G0134300 Rhododendron simsii HOM05D008183 ORTHO05D007254 7.9e-12 73.9 102 37.3
Rhsim01G0167200 Rhododendron simsii HOM05D000003 ORTHO05D007254 1.4e-11 73.2 96 38.5
vmacro20957 Vaccinium macrocarpon HOM05D003698 ORTHO05D004320 1.4e-11 73.2 99 37.4
CSS0036610 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 3.0e-11 72.0 94 42.6
CSS0000077 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.0e-10 69.3 97 40.2
Rhsim01G0165600 Rhododendron simsii HOM05D000003 ORTHO05D007254 4.3e-10 68.2 96 37.5
Rhsim12G0010300 Rhododendron simsii HOM05D008183 ORTHO05D007254 4.3e-10 68.2 96 38.5
Rhsim03G0019700 Rhododendron simsii HOM05D008183 ORTHO05D007254 7.4e-10 67.4 83 43.4
Rhsim03G0019800 Rhododendron simsii HOM05D008183 ORTHO05D007254 7.4e-10 67.4 83 43.4
RhsimUnG0047500 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.3e-09 66.6 82 42.7
Rhsim07G0138700 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.7e-09 66.2 97 36.1
vmacro06821 Vaccinium macrocarpon HOM05D001548 ORTHO05D003901 2.2e-09 65.9 97 39.2
Rhsim01G0063000 Rhododendron simsii HOM05D008183 ORTHO05D007254 2.8e-09 65.5 93 37.6
Rhsim08G0082000 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.1e-08 63.5 83 42.2
CSS0022949 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.8e-08 62.8 97 37.1
Rhsim04G0100600 Rhododendron simsii HOM05D000003 ORTHO05D000004 9.1e-08 60.5 71 39.4
Rhsim02G0203700 Rhododendron simsii HOM05D000001 ORTHO05D009494 2.0e-07 59.3 76 40.8
CSS0043494 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.5e-07 58.2 77 35.1
Rhsim01G0064200 Rhododendron simsii HOM05D008183 ORTHO05D007254 4.5e-07 58.2 81 38.3
CSS0023048 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 5.9e-07 57.8 98 35.7
Rhsim03G0007500 Rhododendron simsii HOM05D033359 ORTHO05D340347 1.3e-06 56.6 87 35.6
Rhsim03G0129900 Rhododendron simsii HOM05D008183 ORTHO05D007254 2.2e-06 55.8 81 33.3
CSS0048373 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.8e-06 55.1 106 33.0
Lj2C40G9 Lonicera japonica HOM05D008183 ORTHO05D007254 3.8e-06 55.1 91 33.0
CSS0000654 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 5.0e-06 54.7 92 37.0
CSS0033631 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 5.0e-06 54.7 101 34.7


User provided reference genes

Program Settings