Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 2.2e-44 181.8 84 100.0
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 5.2e-30 134.0 66 90.9
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 2.6e-29 131.7 66 87.9
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 5.8e-29 130.6 66 83.3
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 1.3e-28 129.4 69 85.5
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 2.2e-28 128.6 66 84.8
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 2.2e-28 128.6 66 84.8
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 6.4e-28 127.1 66 83.3
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 6.4e-28 127.1 70 80.0
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 8.3e-28 126.7 66 83.3
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 1.9e-27 125.6 66 83.3
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 2.4e-27 125.2 66 83.3
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 3.2e-27 124.8 66 81.8
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 3.2e-27 124.8 70 74.3
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 4.1e-27 124.4 66 84.8
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 4.1e-27 124.4 66 78.8
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 7.0e-27 123.6 73 75.3
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 9.2e-27 123.2 73 75.3
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 1.6e-26 122.5 66 78.8
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 2.0e-26 122.1 66 77.3
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 2.7e-26 121.7 66 78.8
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 4.6e-26 120.9 66 78.8
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 4.6e-26 120.9 66 77.3
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 4.6e-26 120.9 66 77.3
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 4.6e-26 120.9 66 77.3
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 4.6e-26 120.9 66 81.8
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 4.6e-26 120.9 66 78.8
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 6.0e-26 120.6 71 76.1
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 7.8e-26 120.2 66 75.8
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 7.8e-26 120.2 66 78.8
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 7.8e-26 120.2 73 75.3
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 7.8e-26 120.2 66 78.8
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 1.0e-25 119.8 65 78.5
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 1.3e-25 119.4 73 74.0
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 1.7e-25 119.0 66 75.8
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 2.3e-25 118.6 66 81.8
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 2.3e-25 118.6 66 77.3
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 2.3e-25 118.6 75 76.0
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 3.0e-25 118.2 68 76.5
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 3.0e-25 118.2 66 78.8
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 3.0e-25 118.2 66 75.8
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 3.9e-25 117.9 66 74.2
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 5.0e-25 117.5 66 77.3
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 5.0e-25 117.5 66 75.8
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 6.6e-25 117.1 66 75.8
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 6.6e-25 117.1 66 77.3
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 8.6e-25 116.7 66 78.8
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 8.6e-25 116.7 66 74.2
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 1.1e-24 116.3 66 74.2
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 1.1e-24 116.3 66 78.8
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 1.5e-24 115.9 66 74.2
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 2.5e-24 115.2 66 71.2
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 2.5e-24 115.2 66 74.2
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 2.5e-24 115.2 66 74.2
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 3.3e-24 114.8 66 71.2
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 3.3e-24 114.8 66 69.7
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 4.3e-24 114.4 66 74.2
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 5.6e-24 114.0 66 74.2
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 5.6e-24 114.0 66 74.2
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 7.3e-24 113.6 66 77.3
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 1.6e-23 112.5 66 75.8
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 1.6e-23 112.5 66 74.2
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 2.1e-23 112.1 73 69.9
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 2.1e-23 112.1 66 75.8
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 2.8e-23 111.7 66 72.7
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 2.8e-23 111.7 66 71.2
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 6.2e-23 110.5 66 72.7
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 6.2e-23 110.5 66 74.2
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 8.1e-23 110.2 66 71.2
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 1.1e-22 109.8 66 69.7
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 1.4e-22 109.4 66 71.2
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 1.8e-22 109.0 66 71.2
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 1.8e-22 109.0 66 71.2
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 1.8e-22 109.0 66 69.7
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 2.3e-22 108.6 66 68.2
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 3.1e-22 108.2 66 69.7
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 3.1e-22 108.2 66 72.7
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 3.1e-22 108.2 66 69.7
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 3.1e-22 108.2 67 73.1
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 4.0e-22 107.8 66 72.7
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 4.0e-22 107.8 66 72.7
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 6.8e-22 107.1 66 69.7
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 6.8e-22 107.1 73 65.8
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 6.8e-22 107.1 66 68.2
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 8.9e-22 106.7 66 68.2
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 2.6e-21 105.1 66 68.2
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 3.4e-21 104.8 71 66.2
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.4e-21 104.4 75 66.7
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 7.5e-21 103.6 67 68.7
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 7.5e-21 103.6 75 65.3
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.3e-20 102.8 74 66.2
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 1.3e-20 102.8 66 68.2
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 2.2e-20 102.1 71 62.0
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 2.9e-20 101.7 66 65.2
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 1.1e-19 99.8 71 64.8
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 5.4e-19 97.4 66 62.1
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 7.1e-19 97.1 66 69.7
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 1.0e-17 93.2 101 47.5
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 2.5e-16 88.6 66 57.6
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.0e-13 79.0 67 56.7
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 3.2e-11 71.6 39 71.8
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 7.8e-10 67.0 34 79.4
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 2.4e-06 55.5 59 50.8


User provided reference genes

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