Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040401 Camellia sinensis var. sinensis HOM05D001633 ORTHO05D006978 4.6e-29 130.6 67 100.0
Actinidia37865 Actinidia chinensis HOM05D001633 ORTHO05D006978 1.2e-08 62.8 43 74.4
Duzib128G0040 Durio zibethinus HOM05D001633 ORTHO05D006978 1.7e-07 58.9 43 72.1
Dinv10882 Davidia involucrata HOM05D001633 ORTHO05D006978 2.2e-07 58.5 32 87.5
RhsimUnG0020800 Rhododendron simsii HOM05D001633 ORTHO05D006978 6.5e-07 57.0 43 67.4
GSVIVG01025824001 Vitis vinifera HOM05D001633 ORTHO05D006978 8.4e-07 56.6 44 70.5
Nn7g37072 Nelumbo nucifera HOM05D001633 ORTHO05D006978 1.1e-06 56.2 43 65.1
Aqoxy4G00837 Aquilegia oxysepala HOM05D001633 ORTHO05D006978 1.4e-06 55.8 43 67.4
Gohir.A08G014100 Gossypium hirsutum HOM05D001633 ORTHO05D006978 1.4e-06 55.8 43 67.4
SGA_v2.0_scaffold90G27743 Striga asiatica HOM05D001633 ORTHO05D006978 1.4e-06 55.8 44 65.9
Manes.08G065800 Manihot esculenta HOM05D001633 ORTHO05D006978 1.9e-06 55.5 45 68.9
vmacro07590 Vaccinium macrocarpon HOM05D001633 ORTHO05D006978 1.9e-06 55.5 69 49.3
Atru.chr1.1514 Acer truncatum HOM05D001633 ORTHO05D006978 2.5e-06 55.1 43 65.1
HanXRQChr15g0492071 Helianthus annuus HOM05D001633 ORTHO05D006978 3.2e-06 54.7 32 78.1
Lsat_1_v5_gn_0_10441 Lactuca sativa HOM05D001633 ORTHO05D006978 3.2e-06 54.7 32 78.1
MBI13_g13128_MAGBIO Magnolia biondii HOM05D001633 ORTHO05D006978 3.2e-06 54.7 43 67.4
TAR623G1603 Trochodendron aralioides HOM05D001633 ORTHO05D006978 3.2e-06 54.7 43 65.1
Aa31LG1G14230 Aethionema arabicum HOM05D001633 ORTHO05D006978 4.2e-06 54.3 44 65.9
A03p09590 Brassica napus HOM05D001633 ORTHO05D006978 4.2e-06 54.3 44 68.2
BraA03t10276Z Brassica rapa HOM05D001633 ORTHO05D006978 4.2e-06 54.3 44 68.2
C03p11160 Brassica napus HOM05D001633 ORTHO05D006978 5.5e-06 53.9 44 68.2
arahy.Tifrunner.gnm1.ann1.36JDZG Arachis hypogaea HOM05D001633 ORTHO05D006978 7.1e-06 53.5 43 60.5
arahy.Tifrunner.gnm1.ann1.XU41E3 Arachis hypogaea HOM05D001633 ORTHO05D006978 7.1e-06 53.5 43 60.5
Gohir.D08G020700 Gossypium hirsutum HOM05D001633 ORTHO05D006978 7.1e-06 53.5 43 65.1
Gorai.004G020000 Gossypium raimondii HOM05D001633 ORTHO05D006978 7.1e-06 53.5 43 65.1
HPP92_004128 Vanilla planifolia HOM05D001633 ORTHO05D006978 7.1e-06 53.5 43 65.1
Thecc.05G119800 Theobroma cacao HOM05D001633 ORTHO05D006978 9.3e-06 53.1 43 65.1


User provided reference genes

Program Settings