Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040373 Camellia sinensis var. sinensis HOM05D000358 ORTHO05D009346 2.8e-94 348.6 176 100.0
Dinv32921 Davidia involucrata HOM05D000358 ORTHO05D002525 2.9e-59 232.3 163 74.2
GSVIVG01001163001 Vitis vinifera HOM05D000358 ORTHO05D009346 1.6e-57 226.5 162 67.9
Atru.chr5.1460 Acer truncatum HOM05D000358 ORTHO05D009346 2.1e-57 226.1 162 69.1
TAR636G2394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 1.4e-56 223.4 148 73.6
TAR375G0394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 1.8e-56 223.0 167 69.5
Prupe.8G239600 Prunus persica HOM05D000358 ORTHO05D009346 1.2e-55 220.3 169 68.0
Manes.05G077400 Manihot esculenta HOM05D000358 ORTHO05D009346 9.8e-55 217.2 166 67.5
TWI14G1410 Tripterygium wilfordii HOM05D000358 ORTHO05D009346 1.7e-54 216.5 173 65.3
MBI04_g20822_MAGBIO Magnolia biondii HOM05D000358 ORTHO05D009346 2.2e-54 216.1 162 67.9
Sabra05G0160900 Salix brachista HOM05D000358 ORTHO05D009346 4.9e-54 214.9 149 69.8
CiPaw.07G090600 Carya illinoinensis HOM05D000358 ORTHO05D009346 8.3e-54 214.2 164 66.5
MD11G1284000 Malus domestica HOM05D000358 ORTHO05D009346 1.4e-53 213.4 171 68.4
vmacro02584 Vaccinium macrocarpon HOM05D000358 ORTHO05D009346 2.4e-53 212.6 173 64.2
CANSAT25G1780 Cannabis sativa HOM05D000358 ORTHO05D009346 9.2e-53 210.7 158 68.4
FvH4_2g23371 Fragaria vesca HOM05D000358 ORTHO05D009346 3.5e-52 208.8 169 64.5
Sopen09g027050 Solanum pennellii HOM05D000358 ORTHO05D009346 8.6e-51 204.1 179 60.3
Ciclev10022514m.g Citrus clementina HOM05D000358 ORTHO05D009346 2.5e-50 202.6 174 61.5
Nitab4.5_0004318g0030 Nicotiana tabacum HOM05D000358 ORTHO05D009346 1.2e-49 200.3 181 62.4
Nitab4.5_0005971g0010 Nicotiana tabacum HOM05D000358 ORTHO05D009346 2.1e-49 199.5 180 61.1
Potri.005G210700 Populus trichocarpa HOM05D000358 ORTHO05D009346 2.1e-49 199.5 167 62.3
Cpa.g.sc52.51 Carica papaya HOM05D000358 ORTHO05D009346 3.6e-49 198.7 145 65.5
AUR62028609 Chenopodium quinoa HOM05D000358 ORTHO05D009346 4.7e-49 198.4 171 63.2
Rhsim13G0026100 Rhododendron simsii HOM05D000358 ORTHO05D009346 4.7e-49 198.4 106 86.8
RcHm_v2.0_Chr6g0290831 Rosa chinensis HOM05D000358 ORTHO05D009346 4.7e-49 198.4 169 60.9
Lj1A47T39 Lonicera japonica HOM05D000358 ORTHO05D009346 1.8e-48 196.4 173 62.4
Peaxi162Scf00641g00315 Petunia axillaris HOM05D000358 ORTHO05D009346 1.8e-48 196.4 125 75.2
Thecc.01G276900 Theobroma cacao HOM05D000358 ORTHO05D009346 1.8e-48 196.4 171 61.4
CsaV3_6G037210 Cucumis sativus L. HOM05D000358 ORTHO05D009346 6.8e-48 194.5 159 61.0
CARHR251060 Cardamine hirsuta HOM05D000358 ORTHO05D009346 3.4e-47 192.2 167 56.3
Gorai.007G137700 Gossypium raimondii HOM05D000358 ORTHO05D009346 3.4e-47 192.2 128 72.7
Hund09500 Selenicereus undatus HOM05D000358 ORTHO05D009346 4.4e-47 191.8 167 58.7
EL10Ac5g10557 Beta vulgaris HOM05D000358 ORTHO05D009346 1.3e-46 190.3 171 60.2
Duzib133G0337 Durio zibethinus HOM05D000358 ORTHO05D009346 1.3e-46 190.3 172 59.9
AL6G50280 Arabidopsis lyrata HOM05D000358 ORTHO05D009346 1.7e-46 189.9 164 57.9
Glyma.03G155200 Glycine max HOM05D000358 ORTHO05D009346 1.7e-46 189.9 152 60.5
Gohir.D11G128700 Gossypium hirsutum HOM05D000358 ORTHO05D009346 2.9e-46 189.1 128 71.9
Solyc09g065300.4 Solanum lycopersicum HOM05D000358 ORTHO05D009346 3.7e-46 188.7 210 51.9
Aqoxy2G03373 Aquilegia oxysepala HOM05D000358 ORTHO05D009346 4.9e-46 188.3 115 76.5
AT4G02725 Arabidopsis thaliana HOM05D000358 ORTHO05D009346 8.3e-46 187.6 161 57.1
Gohir.A11G123500 Gossypium hirsutum HOM05D000358 ORTHO05D009346 8.3e-46 187.6 128 71.1
PSO210G0760 Papaver somniferum HOM05D000358 ORTHO05D009346 1.1e-45 187.2 167 62.3
PSO761G0166 Papaver somniferum HOM05D000358 ORTHO05D009346 1.4e-45 186.8 167 61.1
Sed0015724 Sechium edule HOM05D000358 ORTHO05D009346 1.4e-45 186.8 170 58.8
MSTRG.12558 Avicennia marina HOM05D000358 ORTHO05D009346 1.9e-45 186.4 162 58.0
Actinidia09124 Actinidia chinensis HOM05D000358 ORTHO05D009346 3.2e-45 185.7 106 82.1
THA.LOC104801239 Tarenaya hassleriana HOM05D000358 ORTHO05D009346 3.2e-45 185.7 148 57.4
Eucgr.K03368 Eucalyptus grandis HOM05D000358 ORTHO05D009346 7.0e-45 184.5 149 61.7
Thhalv10029025m.g Eutrema salsugineum HOM05D000358 ORTHO05D009346 7.0e-45 184.5 169 58.0
ECA247G2961 Erigeron canadensis HOM05D000358 ORTHO05D009346 9.2e-45 184.1 148 63.5
Carub.0006s3438 Capsella rubella HOM05D000358 ORTHO05D009346 1.2e-44 183.7 167 55.7
Phvul.001G152500 Phaseolus vulgaris HOM05D000358 ORTHO05D009346 1.6e-44 183.3 176 57.4
Sp6g02670 Schrenkiella parvula HOM05D000358 ORTHO05D009346 1.6e-44 183.3 164 56.7
arahy.Tifrunner.gnm1.ann1.M7C8NM Arachis hypogaea HOM05D000358 ORTHO05D009346 2.0e-44 183.0 146 63.7
Cc01_g19380 Coffea canephora HOM05D000358 ORTHO05D009346 3.5e-44 182.2 153 59.5
arahy.Tifrunner.gnm1.ann1.1D6AAZ Arachis hypogaea HOM05D000358 ORTHO05D009346 4.6e-44 181.8 146 63.7
SalBow6G4489 Salvia bowleyana HOM05D000358 ORTHO05D009346 6.0e-44 181.4 142 62.7
PGR044G2401 Punica granatum HOM05D000358 ORTHO05D009346 1.7e-43 179.9 119 68.9
Lsat_1_v5_gn_9_3480 Lactuca sativa HOM05D000358 ORTHO05D009346 2.3e-43 179.5 134 65.7
BcaB05g23661 Brassica carinata HOM05D000358 ORTHO05D009346 1.1e-42 177.2 163 53.4
Aa31LG5G2370 Aethionema arabicum HOM05D000358 ORTHO05D009346 5.6e-42 174.9 150 58.0
BcaC03g16171 Brassica carinata HOM05D000358 ORTHO05D009346 5.6e-42 174.9 160 53.8
A09p02150 Brassica napus HOM05D000358 ORTHO05D009346 5.6e-42 174.9 161 56.5
C02p39090 Brassica napus HOM05D000358 ORTHO05D009346 5.6e-42 174.9 160 53.8
BolC2t09919H Brassica oleracea HOM05D000358 ORTHO05D009346 5.6e-42 174.9 160 53.8
BraA09t35864Z Brassica rapa HOM05D000358 ORTHO05D009346 7.3e-42 174.5 163 55.8
Medtr7g095090 Medicago truncatula HOM05D000358 ORTHO05D009346 7.3e-42 174.5 170 57.6
A02p24950 Brassica napus HOM05D000358 ORTHO05D009346 9.5e-42 174.1 145 55.9
BraA02t07485Z Brassica rapa HOM05D000358 ORTHO05D009346 9.5e-42 174.1 145 55.9
HanXRQChr15g0466741 Helianthus annuus HOM05D000358 ORTHO05D009346 9.5e-42 174.1 131 65.6
SGA_v2.0_scaffold81G26022 Striga asiatica HOM05D000358 ORTHO05D009346 1.2e-41 173.7 164 56.1
TPR.G35683 Trifolium pratense HOM05D000358 ORTHO05D009346 6.2e-41 171.4 150 61.3
BolC9t53153H Brassica oleracea HOM05D000358 ORTHO05D009346 8.1e-41 171.0 163 55.2
BcaC04g24011 Brassica carinata HOM05D000358 ORTHO05D009346 1.1e-40 170.6 163 55.2
Migut.N02045 Erythranthe guttata HOM05D000358 ORTHO05D009346 1.1e-40 170.6 156 59.0
COL.COLO4_09074 Corchorus olitorius HOM05D000358 ORTHO05D009346 2.3e-40 169.5 161 57.8
Lj1g0011093 Lotus japonicus HOM05D000358 ORTHO05D009346 4.0e-40 168.7 184 50.5
Zm00001eb054110 Zea mays HOM05D000358 ORTHO05D009346 5.2e-40 168.3 108 70.4
Hma1.2p1_0822F.1_g224410 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 9.9e-39 164.1 94 80.9
PGSC0003DMG400019331 Solanum tuberosum HOM05D000358 ORTHO05D009346 2.9e-38 162.5 151 56.3
Os03g0701300 Oryza sativa ssp. japonica HOM05D000358 ORTHO05D009346 1.4e-37 160.2 100 72.0
Hma1.2p1_0822F.1_g224420 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 5.4e-37 158.3 89 80.9
C09p02250 Brassica napus HOM05D000358 ORTHO05D009346 9.2e-37 157.5 187 48.1
VMungo1383G1528 Vigna mungo HOM05D000358 ORTHO05D009346 9.2e-37 157.5 180 51.1
HPP92_009591 Vanilla planifolia HOM05D002842 ORTHO05D003177 5.1e-35 151.8 170 50.0
Haze_04693 Corylus avellana HOM05D000358 ORTHO05D009346 1.1e-34 150.6 143 59.4
Atru.BG.13.p Acer truncatum HOM05D000358 ORTHO05D009346 4.7e-33 145.2 103 67.0
Sc17g0001440 Simmondsia chinensis HOM05D000358 ORTHO05D009346 8.9e-32 141.0 144 55.6
Lalb_Chr01g0020121 Lupinus albus HOM05D000358 ORTHO05D009346 5.8e-31 138.3 104 63.5
CDE02G2742 Ceratophyllum demersum HOM05D006420 ORTHO05D008009 7.6e-31 137.9 92 70.7
SMO340G0322 Selaginella moellendorffii HOM05D000104 ORTHO05D004059 1.3e-30 137.1 123 54.5
ATR0332G065 Amborella trichopoda HOM05D000358 ORTHO05D009346 1.7e-30 136.7 128 53.1
SMO180G0003 Selaginella moellendorffii HOM05D000358 ORTHO05D009346 3.8e-30 135.6 94 62.8
ClCG07G000330 Citrullus lanatus HOM05D000358 ORTHO05D009346 6.4e-30 134.8 157 50.3
Mapoly0004s0031 Marchantia polymorpha HOM05D000358 ORTHO05D009346 6.4e-30 134.8 142 50.0
Pp3c26_14500 Physcomitrium patens HOM05D000358 ORTHO05D009346 2.4e-29 132.9 102 56.9
Psat3g063840 Pisum sativum HOM05D000358 ORTHO05D009346 1.5e-26 123.6 128 53.9
Eucgr.L00778 Eucalyptus grandis HOM05D000358 ORTHO05D009346 4.4e-23 112.1 73 68.5
AagrBONN_evm.TU.Sc2ySwM_362.2722 Anthoceros agrestis HOM05D000358 ORTHO05D009346 1.7e-19 100.1 101 50.5
unitig_899.g15068 Utricularia gibba HOM05D000454 ORTHO05D000591 6.6e-19 98.2 75 58.7
QL12p021343 Quercus lobata HOM05D000358 ORTHO05D009346 3.6e-17 92.4 98 54.1
Eucgr.C01960 Eucalyptus grandis HOM05D000358 ORTHO05D009346 3.1e-16 89.4 63 63.5
Ah.11g050550 Amaranthus hybridus HOM05D000358 ORTHO05D009346 6.9e-16 88.2 171 40.4
FAN20G1711 Fragaria x ananassa HOM05D000358 ORTHO05D009346 9.0e-16 87.8 169 37.3
Nn1g02275 Nelumbo nucifera HOM05D000358 ORTHO05D009346 9.0e-16 87.8 89 53.9
Oeu029468.1 Olea europaea HOM05D000358 ORTHO05D009346 1.4e-13 80.5 77 61.0
MELO3C014393.2 Cucumis melo HOM05D000358 ORTHO05D009346 9.3e-13 77.8 96 49.0


User provided reference genes

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