Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040370 Camellia sinensis var. sinensis HOM05D008359 ORTHO05D010300 9.5e-33 144.4 206 100.0
Manes.03G207300 Manihot esculenta HOM05D008359 ORTHO05D010300 6.0e-11 72.0 85 81.2
DCAR_030453 Daucus carota HOM05D008359 ORTHO05D010300 1.1e-09 67.8 85 67.1
CiPaw.02G072800 Carya illinoinensis HOM05D008359 ORTHO05D010300 3.3e-09 66.2 83 69.9
Duzib212G0105 Durio zibethinus HOM05D008359 ORTHO05D010300 5.6e-09 65.5 82 67.1
HanXRQChr01g0022331 Helianthus annuus HOM05D008359 ORTHO05D010300 6.2e-08 62.0 82 64.6
MBI18_g27373_MAGBIO Magnolia biondii HOM05D008359 ORTHO05D010300 1.4e-07 60.8 82 68.3
unitig_749.g13356 Utricularia gibba HOM05D008359 ORTHO05D010300 1.4e-07 60.8 85 63.5
Potri.010G148400 Populus trichocarpa HOM05D035266 ORTHO05D010300 5.2e-07 58.9 83 69.9
MD13G1149500 Malus domestica HOM05D008359 ORTHO05D010300 8.9e-07 58.2 82 67.1
FAN11G0909 Fragaria x ananassa HOM05D008359 ORTHO05D010300 1.2e-06 57.8 85 64.7
CANSAT78G0680 Cannabis sativa HOM05D008359 ORTHO05D010300 1.5e-06 57.4 32 78.1
Sp3g15360 Schrenkiella parvula HOM05D009524 ORTHO05D014763 1.5e-06 57.4 87 57.5
Sabra10G0114500 Salix brachista HOM05D008359 ORTHO05D010300 2.0e-06 57.0 31 80.6
Migut.N00029 Erythranthe guttata HOM05D008359 ORTHO05D010300 4.4e-06 55.8 31 77.4
arahy.Tifrunner.gnm1.ann1.A765BG Arachis hypogaea HOM05D028921 ORTHO05D084755 5.8e-06 55.5 83 57.8
BcaB07g33802 Brassica carinata HOM05D008359 ORTHO05D010300 5.8e-06 55.5 31 77.4
FAN12G0153 Fragaria x ananassa HOM05D008359 ORTHO05D010300 5.8e-06 55.5 31 77.4
RcHm_v2.0_Chr4g0425941 Rosa chinensis HOM05D008359 ORTHO05D010300 5.8e-06 55.5 31 77.4
Sp1g34910 Schrenkiella parvula HOM05D008359 ORTHO05D010300 5.8e-06 55.5 31 77.4
CARHR037590 Cardamine hirsuta HOM05D008359 ORTHO05D010300 7.5e-06 55.1 30 80.0
Haze_01345 Corylus avellana HOM05D008359 ORTHO05D010300 7.5e-06 55.1 32 71.9
Nitab4.5_0000289g0010 Nicotiana tabacum HOM05D008359 ORTHO05D010300 7.5e-06 55.1 30 80.0
PSO170G0412 Papaver somniferum HOM05D054572 ORTHO05D050203 7.5e-06 55.1 88 68.2
SGA_v2.0_scaffold227G43229 Striga asiatica HOM05D008359 ORTHO05D010300 7.5e-06 55.1 30 80.0
Atru.chr4.3060 Acer truncatum HOM05D008359 ORTHO05D010300 9.9e-06 54.7 31 77.4
A06p04780 Brassica napus HOM05D008359 ORTHO05D010300 9.9e-06 54.7 31 74.2
BraA06t23682Z Brassica rapa HOM05D008359 ORTHO05D010300 9.9e-06 54.7 31 74.2
FAN07G0737 Fragaria x ananassa HOM05D008359 ORTHO05D010300 9.9e-06 54.7 30 80.0
Thecc.04G305300 Theobroma cacao HOM05D008359 ORTHO05D010300 9.9e-06 54.7 85 71.8


User provided reference genes

Program Settings