Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040367 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 1.7e-280 968.8 511 100.0
CSS0038026 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 2.1e-262 908.7 511 93.0
Dinv23105 Davidia involucrata HOM05D003907 ORTHO05D004819 6.6e-261 903.7 511 92.2
CiPaw.09G209200 Carya illinoinensis HOM05D003907 ORTHO05D004819 2.5e-260 901.7 511 91.2
Actinidia05367 Actinidia chinensis HOM05D003907 ORTHO05D004819 9.5e-260 899.8 513 92.2
Cfa017208 Carpinus fangiana HOM05D003907 ORTHO05D004819 6.2e-259 897.1 511 91.4
TAR636G2600 Trochodendron aralioides HOM05D003907 ORTHO05D004819 3.1e-258 894.8 511 91.2
GSVIVG01033959001 Vitis vinifera HOM05D003907 ORTHO05D004819 4.0e-258 894.4 511 90.8
Nn2g11497 Nelumbo nucifera HOM05D003907 ORTHO05D004819 7.6e-257 890.2 511 90.4
TWI53G0466 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 7.6e-257 890.2 511 91.0
MSTRG.26811 Avicennia marina HOM05D003907 ORTHO05D004819 9.9e-257 889.8 511 90.6
Ciclev10011517m.g Citrus clementina HOM05D003907 ORTHO05D004819 9.9e-257 889.8 511 89.6
Prupe.6G277300 Prunus persica HOM05D003907 ORTHO05D004819 2.2e-256 888.6 511 90.4
Cc06_g01360 Coffea canephora HOM05D003907 ORTHO05D004819 2.9e-256 888.3 511 90.8
Duzib106G0096 Durio zibethinus HOM05D003907 ORTHO05D004819 4.9e-256 887.5 511 89.6
Gohir.D09G160800 Gossypium hirsutum HOM05D003907 ORTHO05D004819 4.9e-256 887.5 511 90.0
Lj2A75G35 Lonicera japonica HOM05D003907 ORTHO05D004819 8.4e-256 886.7 511 90.6
Gorai.006G182500 Gossypium raimondii HOM05D003907 ORTHO05D004819 1.4e-255 885.9 511 89.8
Manes.09G104800 Manihot esculenta HOM05D003907 ORTHO05D004819 4.1e-255 884.4 511 89.8
MSTRG.10218 Avicennia marina HOM05D003907 ORTHO05D004819 5.4e-255 884.0 511 89.6
Gohir.A09G165200 Gossypium hirsutum HOM05D003907 ORTHO05D004819 5.4e-255 884.0 511 89.6
TWI74G1106 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 5.4e-255 884.0 511 90.4
Oeu041306.1 Olea europaea HOM05D003907 ORTHO05D004819 7.1e-255 883.6 511 90.4
TAR633G0126 Trochodendron aralioides HOM05D003907 ORTHO05D004819 9.2e-255 883.2 511 89.4
Manes.09G105700 Manihot esculenta HOM05D003907 ORTHO05D004819 3.5e-254 881.3 511 89.6
QL07p019755 Quercus lobata HOM05D003907 ORTHO05D004819 3.5e-254 881.3 510 89.2
SGA_v2.0_scaffold110G31215 Striga asiatica HOM05D003907 ORTHO05D004819 3.5e-254 881.3 511 89.0
Atru.chr8.2242 Acer truncatum HOM05D003907 ORTHO05D004819 4.6e-254 880.9 511 88.6
Nitab4.5_0000335g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 4.6e-254 880.9 511 90.0
Nitab4.5_0000511g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 6.0e-254 880.6 511 89.6
CAN.G5.12 Capsicum annuum HOM05D003907 ORTHO05D004819 7.8e-254 880.2 511 89.0
Potri.006G100200 Populus trichocarpa HOM05D003907 ORTHO05D004819 1.7e-253 879.0 511 88.8
ClCG04G006990 Citrullus lanatus HOM05D003907 ORTHO05D004819 2.3e-253 878.6 511 89.4
Lsat_1_v5_gn_9_34621 Lactuca sativa HOM05D003907 ORTHO05D004819 3.0e-253 878.2 511 88.6
PGSC0003DMG400023084 Solanum tuberosum HOM05D003907 ORTHO05D004819 5.1e-253 877.5 511 88.8
Glyma.18G200800 Glycine max HOM05D003907 ORTHO05D004819 6.6e-253 877.1 511 89.4
Sopen09g001280 Solanum pennellii HOM05D003907 ORTHO05D004819 6.6e-253 877.1 511 89.0
Thecc.05G016000 Theobroma cacao HOM05D003907 ORTHO05D004819 6.6e-253 877.1 511 88.6
Solyc09g005310.3 Solanum lycopersicum HOM05D003907 ORTHO05D004819 8.6e-253 876.7 511 89.0
CsaV3_4G026280 Cucumis sativus L. HOM05D003907 ORTHO05D004819 1.1e-252 876.3 511 89.4
HanXRQChr10g0299881 Helianthus annuus HOM05D003907 ORTHO05D004819 3.3e-252 874.8 511 88.6
CiPaw.10G156600 Carya illinoinensis HOM05D003907 ORTHO05D004819 5.6e-252 874.0 511 88.6
vmacro11169 Vaccinium macrocarpon HOM05D003907 ORTHO05D004819 7.3e-252 873.6 550 84.7
Migut.L02013 Erythranthe guttata HOM05D003907 ORTHO05D004819 9.6e-252 873.2 511 89.0
CANSAT35G0110 Cannabis sativa HOM05D003907 ORTHO05D004819 1.2e-251 872.8 511 89.0
Glyma.07G149900 Glycine max HOM05D003907 ORTHO05D004819 1.2e-251 872.8 511 88.8
Haze_21003 Corylus avellana HOM05D003907 ORTHO05D004819 1.6e-251 872.5 528 87.5
Potri.016G116200 Populus trichocarpa HOM05D003907 ORTHO05D004819 1.6e-251 872.5 511 88.3
MD04G1152700 Malus domestica HOM05D003907 ORTHO05D004819 8.1e-251 870.2 511 88.5
Psat3g128200 Pisum sativum HOM05D003907 ORTHO05D004819 8.1e-251 870.2 511 88.1
Sabra16G0111700 Salix brachista HOM05D003907 ORTHO05D004819 1.8e-250 869.0 511 87.7
PGR004G0735 Punica granatum HOM05D003907 ORTHO05D004819 1.5e-249 865.9 509 88.4
Aqoxy4G02574 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 2.0e-249 865.5 512 86.7
MD12G1166000 Malus domestica HOM05D003907 ORTHO05D004819 3.4e-249 864.8 511 88.1
Medtr7g068440 Medicago truncatula HOM05D003907 ORTHO05D004819 9.9e-249 863.2 511 87.7
Migut.J00170 Erythranthe guttata HOM05D003907 ORTHO05D004819 2.9e-248 861.7 511 87.3
Glyma.03G058100 Glycine max HOM05D003907 ORTHO05D004819 4.9e-248 860.9 511 87.5
TPR.G13353 Trifolium pratense HOM05D003907 ORTHO05D004819 4.9e-248 860.9 512 87.3
THA.LOC104823300 Tarenaya hassleriana HOM05D003907 ORTHO05D004819 6.4e-248 860.5 511 87.5
Sed0026155 Sechium edule HOM05D003907 ORTHO05D004819 1.1e-247 859.8 511 87.5
Rhsim03G0144200 Rhododendron simsii HOM05D003907 ORTHO05D004819 1.9e-247 859.0 506 90.5
Sed0027660 Sechium edule HOM05D003907 ORTHO05D004819 1.9e-247 859.0 511 87.5
Glyma.01G122100 Glycine max HOM05D003907 ORTHO05D004819 2.4e-247 858.6 511 87.3
Carub.0006s0037 Capsella rubella HOM05D003907 ORTHO05D004819 5.4e-247 857.4 511 85.9
Ah.12g058610 Amaranthus hybridus HOM05D003907 ORTHO05D004819 1.2e-246 856.3 511 86.7
Thhalv10013023m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 2.1e-246 855.5 511 85.7
PSO801G0155 Papaver somniferum HOM05D003907 ORTHO05D004819 3.5e-246 854.7 511 87.1
PSO339G6136 Papaver somniferum HOM05D003907 ORTHO05D004819 4.6e-246 854.4 511 87.1
RcHm_v2.0_Chr3g0463141 Rosa chinensis HOM05D003907 ORTHO05D004819 4.6e-246 854.4 511 86.7
arahy.Tifrunner.gnm1.ann1.NAY5W3 Arachis hypogaea HOM05D003907 ORTHO05D004819 1.0e-245 853.2 511 86.5
arahy.Tifrunner.gnm1.ann1.S2G015 Arachis hypogaea HOM05D003907 ORTHO05D004819 1.0e-245 853.2 511 86.5
DCAR_018702 Daucus carota HOM05D003907 ORTHO05D004819 1.7e-245 852.4 512 86.3
Lalb_Chr01g0023081 Lupinus albus HOM05D003907 ORTHO05D004819 1.7e-245 852.4 512 86.5
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 3.0e-245 851.7 503 88.5
Aqoxy2G00900 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 5.1e-245 850.9 512 86.9
AL3G19930 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 5.1e-245 850.9 511 84.7
Lj3g0019592 Lotus japonicus HOM05D003907 ORTHO05D004819 5.1e-245 850.9 511 86.3
ATR0618G011 Amborella trichopoda HOM05D003907 ORTHO05D004819 6.6e-245 850.5 512 86.3
AT5G01460 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 6.6e-245 850.5 511 85.3
AL6G10610 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 1.1e-244 849.7 511 85.1
CARHR211830 Cardamine hirsuta HOM05D003907 ORTHO05D004819 1.5e-244 849.4 511 84.7
Sp6g40750 Schrenkiella parvula HOM05D003907 ORTHO05D004819 1.9e-244 849.0 511 85.5
Ca_20232_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 3.3e-244 848.2 511 85.9
Hund14296 Selenicereus undatus HOM05D003907 ORTHO05D004819 4.3e-244 847.8 512 85.9
Carub.0003s0804 Capsella rubella HOM05D003907 ORTHO05D004819 1.3e-243 846.3 511 84.5
EL10Ac5g12561 Beta vulgaris HOM05D003907 ORTHO05D004819 1.6e-243 845.9 511 84.5
Lj3A953T53 Lonicera japonica HOM05D003907 ORTHO05D004819 2.1e-243 845.5 523 84.7
Phvul.008G104400 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 2.8e-243 845.1 511 86.3
AT3G08930 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 3.6e-243 844.7 511 84.1
SalBow5G2920 Salvia bowleyana HOM05D003907 ORTHO05D004819 6.2e-243 844.0 511 84.7
BcaB04g18559 Brassica carinata HOM05D003907 ORTHO05D004819 8.1e-243 843.6 511 84.7
AUR62010458 Chenopodium quinoa HOM05D003907 ORTHO05D004819 8.1e-243 843.6 512 85.0
FAN09G4250 Fragaria x ananassa HOM05D003907 ORTHO05D004819 8.1e-243 843.6 511 85.9
unitig_8.g3229 Utricularia gibba HOM05D003907 ORTHO05D004819 1.4e-242 842.8 511 85.3
BolC5t34549H Brassica oleracea HOM05D003907 ORTHO05D004819 2.4e-242 842.0 511 84.3
C05p58960 Brassica napus HOM05D003907 ORTHO05D004819 3.1e-242 841.6 511 84.3
BraSC256t45932Z Brassica rapa HOM05D003907 ORTHO05D004819 6.9e-242 840.5 511 84.1
Thhalv10020541m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 6.9e-242 840.5 511 83.8
Sp3g07320 Schrenkiella parvula HOM05D003907 ORTHO05D004819 9.0e-242 840.1 511 83.8
FvH4_6g11450 Fragaria vesca HOM05D003907 ORTHO05D004819 1.2e-241 839.7 511 85.3
FAN14G1433 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.2e-241 839.7 511 85.3
FAN14G5854 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.2e-241 839.7 511 85.3
FAN02G2014 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.5e-241 839.3 511 85.3
CARHR083260 Cardamine hirsuta HOM05D003907 ORTHO05D004819 2.6e-241 838.6 511 83.8
Lalb_Chr03g0043281 Lupinus albus HOM05D003907 ORTHO05D004819 3.4e-241 838.2 512 85.0
Eucgr.B02811 Eucalyptus grandis HOM05D003907 ORTHO05D004819 7.9e-238 827.0 495 88.1
ECA247G1720 Erigeron canadensis HOM05D003907 ORTHO05D004819 2.8e-235 818.5 476 88.0
VMungo0331G1185 Vigna mungo HOM05D003907 ORTHO05D004819 1.1e-234 816.6 495 86.5
A03p36270 Brassica napus HOM05D003907 ORTHO05D004819 1.2e-233 813.1 511 82.0
C03p43910 Brassica napus HOM05D003907 ORTHO05D004819 1.2e-233 813.1 511 82.0
BolC3t16659H Brassica oleracea HOM05D003907 ORTHO05D004819 1.5e-233 812.8 511 81.8
A05p39920 Brassica napus HOM05D003907 ORTHO05D004819 3.4e-233 811.6 495 84.2
BraA03t12798Z Brassica rapa HOM05D003907 ORTHO05D004819 3.4e-233 811.6 511 81.8
Aa31LG1G23090 Aethionema arabicum HOM05D003907 ORTHO05D004819 9.9e-233 810.1 495 84.4
Oeu064499.2 Olea europaea HOM05D003907 ORTHO05D004819 1.7e-232 809.3 548 79.4
FAN05G4390 Fragaria x ananassa HOM05D003907 ORTHO05D004819 3.8e-232 808.1 495 85.3
Sabra06G0077000 Salix brachista HOM05D003907 ORTHO05D004819 3.8e-232 808.1 557 78.3
COL.COLO4_14536 Corchorus olitorius HOM05D003907 ORTHO05D004819 1.9e-231 805.8 473 88.8
CDE05G1648 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 1.3e-229 799.7 512 79.9
Lalb_Chr19g0124541 Lupinus albus HOM05D003907 ORTHO05D004819 1.5e-228 796.2 512 81.6
AUR62030453 Chenopodium quinoa HOM05D003907 ORTHO05D004819 4.8e-227 791.2 513 81.5
Zm00001eb269470 Zea mays HOM05D003907 ORTHO05D004819 6.2e-227 790.8 510 80.4
Peaxi162Scf00141g01026 Petunia axillaris HOM05D003907 ORTHO05D004819 4.5e-225 784.6 511 81.4
CDE05G1838 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 1.0e-224 783.5 512 78.5
Ca_07641_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 1.2e-222 776.5 525 79.4
Ca_30080_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 1.2e-222 776.5 525 79.4
Phvul.010G001200 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 1.2e-222 776.5 511 80.0
Zm00001eb378570 Zea mays HOM05D003907 ORTHO05D004819 7.9e-222 773.9 510 79.4
BcaC05g29627 Brassica carinata HOM05D003907 ORTHO05D004819 2.9e-208 728.8 441 84.6
Duzib128G0387 Durio zibethinus HOM05D003907 ORTHO05D004819 4.6e-206 721.5 511 76.5
MELO3C003291.2 Cucumis melo HOM05D003907 ORTHO05D004819 2.0e-204 716.1 473 82.2
Actinidia20733 Actinidia chinensis HOM05D003907 ORTHO05D004819 9.1e-202 707.2 511 75.7
Duzib093G1828 Durio zibethinus HOM05D003907 ORTHO05D004819 7.7e-201 704.1 503 75.1
Lj3g0026649 Lotus japonicus HOM05D003907 ORTHO05D004819 2.1e-198 696.0 414 87.7
Mapoly0058s0053 Marchantia polymorpha HOM05D003907 ORTHO05D004819 4.1e-194 681.8 516 66.7
SMO367G0485 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 3.5e-185 652.1 503 68.0
Cpa.g.sc11.141 Carica papaya HOM05D003907 ORTHO05D004819 8.8e-181 637.5 376 87.8
unitig_22.g6592 Utricularia gibba HOM05D003907 ORTHO05D004819 2.0e-180 636.3 469 72.9
Pp3c13_15020 Physcomitrium patens HOM05D003907 ORTHO05D004819 1.1e-175 620.5 516 62.0
Sc01g0006450 Simmondsia chinensis HOM05D003907 ORTHO05D004819 4.4e-172 608.6 366 86.9
HPP92_003698 Vanilla planifolia HOM05D003907 ORTHO05D004819 7.0e-170 601.3 380 82.4
CBR_g40208 Chara braunii HOM05D003907 ORTHO05D004819 1.6e-169 600.1 522 60.7
TPR.G7076 Trifolium pratense HOM05D003907 ORTHO05D004819 7.8e-169 597.8 365 86.0
DCAR_015417 Daucus carota HOM05D003907 ORTHO05D004819 8.9e-165 584.3 505 66.9
SMO146G0061 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.5e-164 583.6 496 60.7
CBR_g53729 Chara braunii HOM05D003907 ORTHO05D004819 2.0e-164 583.2 511 59.5
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 5.6e-159 565.1 348 85.3
Hma1.2p1_0362F.1_g136250 Hydrangea macrophylla HOM05D003907 ORTHO05D004819 1.6e-158 563.5 325 91.1
Pp3c23_4110 Physcomitrium patens HOM05D003907 ORTHO05D004819 8.3e-155 551.2 499 54.5
Actinidia11586 Actinidia chinensis HOM05D003907 ORTHO05D004819 3.5e-153 545.8 458 68.6
Glyma.16G099300 Glycine max HOM05D003907 ORTHO05D004819 2.7e-145 519.6 307 88.9
Actinidia27153 Actinidia chinensis HOM05D003907 ORTHO05D004819 3.6e-142 509.2 284 93.7
AagrBONN_evm.TU.Sc2ySwM_368.1024 Anthoceros agrestis HOM05D003907 ORTHO05D004819 9.9e-132 474.6 383 63.4
Actinidia29101 Actinidia chinensis HOM05D003907 ORTHO05D004819 2.5e-127 459.9 255 92.5
PRCOL_00002088 Prasinoderma coloniale HOM05D003907 ORTHO05D004819 4.5e-116 422.5 508 47.2
Actinidia29102 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.4e-114 417.5 245 89.8
MCO03G500 Micromonas commoda HOM05D003907 ORTHO05D004819 7.1e-106 388.7 488 44.5
SMO015G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 7.1e-106 388.7 388 55.4
SEGI_00285 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 3.0e-104 383.3 267 77.5
CSS0040994 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 2.3e-96 357.1 199 97.0
Cre01.g023400 Chlamydomonas reinhardtii HOM05D003907 ORTHO05D004819 6.7e-96 355.5 519 38.5
SMO173G0027 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 3.0e-72 276.9 345 48.1
TPR.G8133 Trifolium pratense HOM05D003907 ORTHO05D038338 2.1e-65 254.2 504 37.9
SEGI_07345 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 3.5e-60 236.9 144 84.7
SMO173G0021 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 7.2e-58 229.2 313 45.0
SMO023G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D376622 2.8e-57 227.3 366 41.8
ATR0759G042 Amborella trichopoda HOM05D003907 ORTHO05D038338 2.0e-47 194.5 117 81.2
ATR0759G047 Amborella trichopoda HOM05D003907 ORTHO05D004819 5.8e-47 193.0 150 74.0
SMO146G0194 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 7.5e-47 192.6 211 53.1
SMO173G0002 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.0e-43 182.2 197 52.3
Ca_20230_v3 Cicer arietinum L. HOM05D003907 ORTHO05D148210 9.5e-34 149.1 106 72.6
SMO146G0334 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 5.2e-32 143.3 119 58.8
BcaC01g04205 Brassica carinata HOM05D003907 ORTHO05D004819 1.6e-28 131.7 82 84.1
VMungo1080G1595 Vigna mungo HOM05D003907 ORTHO05D004819 5.4e-21 106.7 121 58.7
SMO173G0093 Selaginella moellendorffii HOM05D003907 ORTHO05D378519 1.1e-10 72.4 63 58.7
arahy.Tifrunner.gnm1.ann1.W1QHU6 Arachis hypogaea HOM05D003907 ORTHO05D018508 5.6e-10 70.1 39 84.6
arahy.Tifrunner.gnm1.ann1.7H636Z Arachis hypogaea HOM05D005380 ORTHO05D006601 1.1e-08 65.9 37 83.8
PSO541G6111 Papaver somniferum HOM05D003907 ORTHO05D305003 2.9e-06 57.8 38 76.3


User provided reference genes

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