Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040293 Camellia sinensis var. sinensis HOM05D014961 ORTHO05D010667 1.2e-146 523.1 258 100.0
CSS0022263 Camellia sinensis var. sinensis HOM05D014961 ORTHO05D010667 8.2e-135 483.8 257 92.2
CSS0038751 Camellia sinensis var. sinensis HOM05D014961 ORTHO05D010667 1.3e-95 353.6 258 71.7
CSS0037342 Camellia sinensis var. sinensis HOM05D014961 ORTHO05D010667 1.5e-80 303.5 261 65.1
Actinidia30913 Actinidia chinensis HOM05D014961 ORTHO05D010667 2.0e-32 143.7 309 35.9
Dinv03360 Davidia involucrata HOM05D002010 ORTHO05D001602 6.3e-26 122.1 280 37.9
Dinv17748 Davidia involucrata HOM05D014961 ORTHO05D010667 2.0e-24 117.1 270 37.0
Actinidia05752 Actinidia chinensis HOM05D014961 ORTHO05D010667 1.3e-23 114.4 360 31.7
Hma1.2p1_0083F.1_g042640 Hydrangea macrophylla HOM05D014961 ORTHO05D010667 5.2e-20 102.4 295 35.6
Potri.013G032900 Populus trichocarpa HOM05D009433 ORTHO05D010667 9.7e-19 98.2 281 30.6
Atru.chr2.648 Acer truncatum HOM05D009433 ORTHO05D010667 9.1e-17 91.7 339 31.0
CiPaw.07G009700 Carya illinoinensis HOM05D009433 ORTHO05D010667 2.7e-16 90.1 284 29.9
Manes.08G126300 Manihot esculenta HOM05D009433 ORTHO05D010667 3.2e-14 83.2 298 29.2
Sabra13G0032700 Salix brachista HOM05D009433 ORTHO05D010667 7.2e-14 82.0 289 29.4
TAR362G0181 Trochodendron aralioides HOM05D009433 ORTHO05D010667 9.4e-14 81.6 271 31.0
GSVIVG01021903001 Vitis vinifera HOM05D009433 ORTHO05D010667 9.4e-14 81.6 298 29.9
Thecc.05G291900 Theobroma cacao HOM05D009433 ORTHO05D010667 1.2e-13 81.3 347 30.3
Rhsim10G0110300 Rhododendron simsii HOM05D000105 ORTHO05D010667 1.4e-12 77.8 103 41.7
Prupe.6G336600 Prunus persica HOM05D014796 ORTHO05D010667 8.8e-12 75.1 281 26.0
Ciclev10001604m.g Citrus clementina HOM05D009433 ORTHO05D010667 2.8e-10 70.1 356 27.2
Potri.005G047000 Populus trichocarpa HOM05D009433 ORTHO05D010667 6.3e-10 68.9 161 31.1
Rhsim10G0109900 Rhododendron simsii HOM05D014961 ORTHO05D010667 1.4e-09 67.8 126 35.7
CiPaw.08G177600 Carya illinoinensis HOM05D009433 ORTHO05D010667 4.1e-09 66.2 210 29.5
FAN05G2376 Fragaria x ananassa HOM05D014796 ORTHO05D010667 4.1e-09 66.2 249 28.1
Cc02_g31110 Coffea canephora HOM05D014961 ORTHO05D010667 5.9e-08 62.4 210 29.0
Prupe.6G336700 Prunus persica HOM05D014796 ORTHO05D010667 7.7e-08 62.0 168 33.3
FAN02G2459 Fragaria x ananassa HOM05D014796 ORTHO05D010667 1.0e-07 61.6 251 27.9
FAN14G0553 Fragaria x ananassa HOM05D014796 ORTHO05D010667 1.7e-07 60.8 251 27.1
QL03p000754 Quercus lobata HOM05D009433 ORTHO05D010667 1.7e-07 60.8 101 40.6
FAN05G2611 Fragaria x ananassa HOM05D014796 ORTHO05D010667 2.2e-07 60.5 237 27.0
FAN09G0699 Fragaria x ananassa HOM05D014796 ORTHO05D010667 5.0e-07 59.3 248 27.0
Sabra05G0042800 Salix brachista HOM05D009433 ORTHO05D010667 1.5e-06 57.8 174 31.0
Cpa.g.sc117.35 Carica papaya HOM05D009433 ORTHO05D010667 1.9e-06 57.4 113 36.3
Aqoxy5G00608 Aquilegia oxysepala HOM05D009433 ORTHO05D010667 3.2e-06 56.6 306 28.1


User provided reference genes

Program Settings