Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003559 Camellia sinensis var. sinensis HOM05D010455 ORTHO05D010927 3.9e-30 134.8 107 100.0
CSS0040289 Camellia sinensis var. sinensis HOM05D010455 ORTHO05D010927 3.9e-30 134.8 107 100.0
Actinidia19768 Actinidia chinensis HOM05D010455 ORTHO05D010927 2.1e-12 75.9 34 97.1
Dinv24410 Davidia involucrata HOM05D010455 ORTHO05D010927 1.8e-11 72.8 34 88.2
ECA236G1914 Erigeron canadensis HOM05D000101 ORTHO05D000089 9.0e-11 70.5 35 80.0
Sabra05G0027500 Salix brachista HOM05D015247 ORTHO05D010927 9.0e-11 70.5 35 80.0
Sabra13G0010500 Salix brachista HOM05D015247 ORTHO05D010927 9.0e-11 70.5 35 80.0
Cpa.g.sc48.126 Carica papaya HOM05D010455 ORTHO05D010927 1.2e-10 70.1 35 85.7
Potri.005G021500 Populus trichocarpa HOM05D015247 ORTHO05D010927 1.2e-10 70.1 35 80.0
Migut.B01004 Erythranthe guttata HOM05D010455 ORTHO05D010927 1.5e-10 69.7 33 90.9
Nitab4.5_0001971g0050 Nicotiana tabacum HOM05D010455 ORTHO05D010927 3.4e-10 68.6 34 82.4
Peaxi162Scf00037g00185 Petunia axillaris HOM05D010455 ORTHO05D010927 5.8e-10 67.8 34 82.4
Nitab4.5_0002612g0010 Nicotiana tabacum HOM05D010455 ORTHO05D010927 7.6e-10 67.4 34 79.4
Potri.013G011950 Populus trichocarpa HOM05D015247 ORTHO05D010927 1.0e-09 67.0 35 77.1
Solyc01g100070.3 Solanum lycopersicum HOM05D010455 ORTHO05D010927 1.0e-09 67.0 34 82.4
PGSC0003DMG400024774 Solanum tuberosum HOM05D010455 ORTHO05D010927 1.0e-09 67.0 34 82.4
Rhsim05G0136000 Rhododendron simsii HOM05D010455 ORTHO05D010927 1.3e-09 66.6 34 82.4
unitig_42.g32309 Utricularia gibba HOM05D010455 ORTHO05D010927 1.3e-09 66.6 34 79.4
unitig_899.g14744 Utricularia gibba HOM05D010455 ORTHO05D010927 1.3e-09 66.6 34 79.4
CARHR186470 Cardamine hirsuta HOM05D012757 ORTHO05D010927 2.9e-09 65.5 34 76.5
QL03p018916 Quercus lobata HOM05D015247 ORTHO05D010927 4.9e-09 64.7 34 79.4
Sopen01g043600 Solanum pennellii HOM05D010455 ORTHO05D010927 4.9e-09 64.7 34 82.4
THA.LOC104802786 Tarenaya hassleriana HOM05D012757 ORTHO05D010927 6.5e-09 64.3 34 82.4
Lsat_1_v5_gn_9_124561 Lactuca sativa HOM05D010455 ORTHO05D010927 1.1e-08 63.5 33 72.7
Manes.09G174200 Manihot esculenta HOM05D010455 ORTHO05D010927 1.1e-08 63.5 35 74.3
Ciclev10003158m.g Citrus clementina HOM05D015247 ORTHO05D010927 1.4e-08 63.2 34 79.4
Prupe.6G317300 Prunus persica HOM05D010455 ORTHO05D010927 1.9e-08 62.8 35 71.4
Duzib177G0175 Durio zibethinus HOM05D016798 ORTHO05D016261 4.2e-08 61.6 35 68.6
BcaC04g23659 Brassica carinata HOM05D012757 ORTHO05D010927 5.5e-08 61.2 34 70.6
A09p05550 Brassica napus HOM05D012757 ORTHO05D010927 5.5e-08 61.2 34 70.6
C09p06040 Brassica napus HOM05D012757 ORTHO05D010927 5.5e-08 61.2 34 70.6
BolC9t53529H Brassica oleracea HOM05D012757 ORTHO05D010927 5.5e-08 61.2 34 70.6
BraA09t36196Z Brassica rapa HOM05D012757 ORTHO05D010927 5.5e-08 61.2 34 70.6
THA.LOC104820098 Tarenaya hassleriana HOM05D012757 ORTHO05D010927 5.5e-08 61.2 34 73.5
Thhalv10005673m.g Eutrema salsugineum HOM05D012757 ORTHO05D010927 7.1e-08 60.8 34 70.6
BcaB04g19697 Brassica carinata HOM05D012757 ORTHO05D010927 9.3e-08 60.5 34 67.6
Carub.0006s2524 Capsella rubella HOM05D012757 ORTHO05D010927 1.6e-07 59.7 34 70.6
Lalb_Chr02g0148001 Lupinus albus HOM05D014479 ORTHO05D010927 1.6e-07 59.7 35 68.6
Ah.06g190030 Amaranthus hybridus HOM05D031177 ORTHO05D026471 3.5e-07 58.5 33 78.8
Carub.0006s2463 Capsella rubella HOM05D012757 ORTHO05D010927 3.5e-07 58.5 34 67.6
AUR62005244 Chenopodium quinoa HOM05D031177 ORTHO05D026471 3.5e-07 58.5 33 78.8
AUR62000720 Chenopodium quinoa HOM05D031177 ORTHO05D026471 7.9e-07 57.4 33 75.8
AT5G27020 Arabidopsis thaliana HOM05D012757 ORTHO05D010927 1.8e-06 56.2 34 70.6
COL.COLO4_03800 Corchorus olitorius HOM05D016798 ORTHO05D016261 3.9e-06 55.1 34 73.5
Sc16g0008660 Simmondsia chinensis HOM05D031177 ORTHO05D026471 6.7e-06 54.3 34 64.7


User provided reference genes

Program Settings