Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040240 Camellia sinensis var. sinensis HOM05D007729 ORTHO05D009724 0.0e+00 1126.7 575 100.0
Actinidia16844 Actinidia chinensis HOM05D007729 ORTHO05D009724 6.2e-207 724.5 604 66.6
Dinv24421 Davidia involucrata HOM05D007729 ORTHO05D009724 4.3e-192 675.2 584 63.4
Hma1.2p1_1320F.1_g275420 Hydrangea macrophylla HOM05D007729 ORTHO05D009724 2.9e-180 636.0 536 63.8
vmacro01545 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 2.3e-169 599.7 535 63.2
Lj9A208G24 Lonicera japonica HOM05D007729 ORTHO05D009724 3.9e-169 599.0 561 59.7
GSVIVG01031211001 Vitis vinifera HOM05D007729 ORTHO05D009724 9.0e-166 587.8 599 54.6
TAR365G0479 Trochodendron aralioides HOM05D007729 ORTHO05D009724 3.4e-165 585.9 599 57.1
HanXRQChr09g0268291 Helianthus annuus HOM05D007729 ORTHO05D009724 2.1e-162 576.6 603 53.4
Lsat_1_v5_gn_7_73440 Lactuca sativa HOM05D007729 ORTHO05D009724 3.9e-161 572.4 592 53.5
Ciclev10000704m.g Citrus clementina HOM05D007729 ORTHO05D009724 3.7e-159 565.8 587 52.3
Nitab4.5_0000368g0330 Nicotiana tabacum HOM05D007729 ORTHO05D009724 3.7e-159 565.8 602 54.2
Nitab4.5_0006072g0050 Nicotiana tabacum HOM05D007729 ORTHO05D009724 9.0e-158 561.2 625 53.0
PGSC0003DMG400024735 Solanum tuberosum HOM05D007729 ORTHO05D009724 1.0e-156 557.8 603 53.7
Cpa.g.sc48.137 Carica papaya HOM05D007729 ORTHO05D009724 1.3e-156 557.4 584 53.9
ECA236G3528 Erigeron canadensis HOM05D007729 ORTHO05D009724 1.3e-156 557.4 565 54.0
Atru.chr2.143 Acer truncatum HOM05D007729 ORTHO05D009724 1.6e-154 550.4 611 52.4
QL03p018088 Quercus lobata HOM05D007729 ORTHO05D009724 7.9e-154 548.1 607 53.7
Solyc01g100260.4 Solanum lycopersicum HOM05D007729 ORTHO05D009724 5.1e-153 545.4 603 52.6
Potri.005G020100 Populus trichocarpa HOM05D007729 ORTHO05D009724 9.7e-152 541.2 574 53.1
Sopen01g043770 Solanum pennellii HOM05D007729 ORTHO05D009724 1.7e-151 540.4 603 51.9
DCAR_021068 Daucus carota HOM05D007729 ORTHO05D009724 2.8e-151 539.7 572 52.6
DCAR_021070 Daucus carota HOM05D007729 ORTHO05D009724 2.8e-151 539.7 572 52.6
Manes.09G175100 Manihot esculenta HOM05D007729 ORTHO05D009724 6.3e-151 538.5 594 52.4
Nn4g25665 Nelumbo nucifera HOM05D007729 ORTHO05D009724 5.3e-150 535.4 598 52.5
CAN.G1273.5 Capsicum annuum HOM05D007729 ORTHO05D009724 2.0e-149 533.5 605 52.4
Duzib177G0448 Durio zibethinus HOM05D007729 ORTHO05D009724 6.5e-148 528.5 604 51.2
Peaxi162Scf00673g00025 Petunia axillaris HOM05D007729 ORTHO05D009724 4.7e-146 522.3 588 51.5
Oeu053698.1 Olea europaea HOM05D007729 ORTHO05D009724 2.3e-145 520.0 529 54.8
MSTRG.20396 Avicennia marina HOM05D007729 ORTHO05D009724 2.6e-144 516.5 591 50.1
Migut.B00991 Erythranthe guttata HOM05D007729 ORTHO05D009724 2.6e-144 516.5 598 49.8
THA.LOC104805912 Tarenaya hassleriana HOM05D007729 ORTHO05D009724 3.3e-144 516.2 585 51.3
Sabra05G0026100 Salix brachista HOM05D005361 ORTHO05D006518 9.7e-144 514.6 567 51.5
Carub.0001s0852 Capsella rubella HOM05D007729 ORTHO05D009724 3.7e-143 512.7 583 52.7
Thhalv10007209m.g Eutrema salsugineum HOM05D007729 ORTHO05D009724 4.8e-143 512.3 593 51.3
RcHm_v2.0_Chr3g0456781 Rosa chinensis HOM05D007729 ORTHO05D009724 1.6e-141 507.3 589 50.3
FAN05G4184 Fragaria x ananassa HOM05D007729 ORTHO05D009724 2.0e-141 506.9 605 49.3
SalBow7G3736 Salvia bowleyana HOM05D007729 ORTHO05D009724 2.0e-141 506.9 602 48.5
FAN14G4369 Fragaria x ananassa HOM05D007729 ORTHO05D009724 2.6e-141 506.5 592 50.3
Cc02_g34750 Coffea canephora HOM05D007729 ORTHO05D009724 5.9e-141 505.4 603 49.3
MBI18_g24956_MAGBIO Magnolia biondii HOM05D007729 ORTHO05D009724 2.9e-140 503.1 592 50.8
Thecc.05G320400 Theobroma cacao HOM05D007729 ORTHO05D009724 5.0e-140 502.3 591 48.9
Aa31LG1G6090 Aethionema arabicum HOM05D007729 ORTHO05D009724 1.9e-139 500.4 565 52.4
AT1G09195 Arabidopsis thaliana HOM05D007729 ORTHO05D009724 5.5e-139 498.8 548 53.5
AL1G19670 Arabidopsis lyrata HOM05D007729 ORTHO05D009724 9.4e-139 498.0 584 51.0
PSO210G3025 Papaver somniferum HOM05D007729 ORTHO05D009724 9.4e-139 498.0 581 50.4
Sp1g07780 Schrenkiella parvula HOM05D007729 ORTHO05D009724 9.4e-139 498.0 583 51.1
Gohir.D13G114300 Gossypium hirsutum HOM05D007729 ORTHO05D009724 3.6e-138 496.1 574 50.9
PSO761G0658 Papaver somniferum HOM05D007729 ORTHO05D009724 8.0e-138 495.0 581 49.7
FvH4_6g07160 Fragaria vesca HOM05D007729 ORTHO05D009724 1.0e-137 494.6 529 53.3
Gorai.013G128200 Gossypium raimondii HOM05D007729 ORTHO05D009724 2.3e-137 493.4 574 50.9
Gohir.A13G111500 Gossypium hirsutum HOM05D007729 ORTHO05D009724 1.1e-136 491.1 574 50.5
FAN09G4655 Fragaria x ananassa HOM05D007729 ORTHO05D009724 2.0e-136 490.3 592 49.0
C08p12530 Brassica napus HOM05D007729 ORTHO05D009724 1.7e-135 487.3 579 51.3
COL.COLO4_04132 Corchorus olitorius HOM05D007729 ORTHO05D009724 2.8e-135 486.5 577 49.7
A08p34750 Brassica napus HOM05D007729 ORTHO05D009724 1.4e-134 484.2 569 51.7
BolC8t48891H Brassica oleracea HOM05D007729 ORTHO05D009724 4.1e-134 482.6 569 51.5
BraA08t35386Z Brassica rapa HOM05D007729 ORTHO05D009724 7.0e-134 481.9 569 51.3
Lalb_Chr02g0147931 Lupinus albus HOM05D007729 ORTHO05D009724 1.3e-132 477.6 504 53.8
CANSAT54G0579 Cannabis sativa HOM05D007729 ORTHO05D009724 3.8e-132 476.1 591 48.7
PGR031G2787 Punica granatum HOM05D007729 ORTHO05D009724 1.6e-130 470.7 584 48.3
EL10Ac4g09861 Beta vulgaris HOM05D007729 ORTHO05D009724 4.0e-129 466.1 573 48.3
TWI56G1038 Tripterygium wilfordii HOM05D007729 ORTHO05D009724 2.8e-127 459.9 598 45.8
Haze_04087 Corylus avellana HOM05D007729 ORTHO05D009724 1.0e-124 451.4 522 51.1
BcaC07g38483 Brassica carinata HOM05D007729 ORTHO05D009724 3.8e-124 449.5 564 50.0
vmacro05864 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 2.8e-119 433.3 406 61.3
CDE12G0453 Ceratophyllum demersum HOM05D007729 ORTHO05D009724 1.1e-118 431.4 553 45.9
SGA_v2.0_scaffold53G19323 Striga asiatica HOM05D007729 ORTHO05D009724 5.4e-118 429.1 489 48.3
AUR62000694 Chenopodium quinoa HOM05D007729 ORTHO05D009724 1.5e-115 421.0 573 44.5
AUR62005264 Chenopodium quinoa HOM05D007729 ORTHO05D009724 1.9e-115 420.6 587 43.6
CARHR009150 Cardamine hirsuta HOM05D007729 ORTHO05D009724 3.3e-107 393.3 365 60.3
Aqoxy2G02816 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 7.5e-104 382.1 362 57.5
Prupe.6G315600 Prunus persica HOM05D007729 ORTHO05D009724 9.8e-104 381.7 403 54.3
vmacro20072 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 6.0e-101 372.5 405 55.6
ATR0706G084 Amborella trichopoda HOM05D007729 ORTHO05D009724 2.1e-98 364.0 590 39.8
SEGI_22290 Sequoiadendron giganteum HOM05D007729 ORTHO05D009724 4.1e-94 349.7 604 38.9
Duzib147G0321 Durio zibethinus HOM05D007729 ORTHO05D009724 2.9e-87 327.0 362 52.2
Pp3c5_5230 Physcomitrium patens HOM05D007729 ORTHO05D009724 4.6e-85 319.7 596 36.4
Sc16g0008910 Simmondsia chinensis HOM05D007729 ORTHO05D009724 3.0e-84 317.0 403 47.6
Hund21744 Selenicereus undatus HOM05D007729 ORTHO05D009724 1.1e-83 315.1 574 38.5
Atru.chr2.136 Acer truncatum HOM05D007729 ORTHO05D009724 4.0e-81 306.6 313 56.5
Pp3c6_24770 Physcomitrium patens HOM05D007729 ORTHO05D009724 1.2e-80 305.1 598 36.6
Pp3c27_4900 Physcomitrium patens HOM05D007729 ORTHO05D009724 1.1e-73 282.0 586 34.8
PRCOL_00006313 Prasinoderma coloniale HOM05D007729 ORTHO05D009724 1.9e-59 234.6 558 33.0
Haze_25193 Corylus avellana HOM05D007729 ORTHO05D009724 4.6e-45 186.8 187 54.0
Aqoxy2G02815 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 1.5e-35 155.2 180 50.0
Haze_15474 Corylus avellana HOM05D000683 ORTHO05D000507 7.7e-32 142.9 154 47.4
CARHR009140 Cardamine hirsuta HOM05D007729 ORTHO05D009724 1.7e-31 141.7 199 42.7
Haze_25604 Corylus avellana HOM05D007729 ORTHO05D009724 1.5e-22 112.1 124 50.8
MD12G1208200 Malus domestica HOM05D007729 ORTHO05D009724 3.1e-17 94.4 120 45.0
PGSC0003DMG400033855 Solanum tuberosum HOM05D007729 ORTHO05D009724 6.1e-13 80.1 85 48.2
CBR_g1071 Chara braunii HOM05D036030 ORTHO05D009724 2.7e-08 64.7 170 32.9


User provided reference genes

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