Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040194 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.5e-302 1042.0 500 100.0
CSS0031015 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.4e-300 1035.4 500 99.0
CSS0035496 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 9.2e-300 1032.7 500 99.0
CSS0040116 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.2e-299 1032.3 500 99.0
CSS0037937 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.9e-298 1027.3 500 98.8
CSS0046160 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.1e-298 1026.9 500 98.6
CSS0037157 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 8.6e-298 1026.2 500 98.6
CSS0002387 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.1e-296 1021.5 500 98.2
CSS0014623 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.1e-296 1021.5 500 98.0
CSS0035234 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.6e-296 1020.8 500 98.2
CSS0019796 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.8e-295 1018.5 500 97.8
CSS0028923 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.1e-295 1017.7 500 97.8
CSS0005765 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.6e-294 1014.6 500 97.0
Prupe.4G266300 Prunus persica HOM05D007060 ORTHO05D009087 1.3e-213 746.5 500 71.2
TAR623G0941 Trochodendron aralioides HOM05D007060 ORTHO05D009087 4.7e-211 738.0 509 70.1
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 4.9e-208 728.0 499 70.1
CiPaw.13G043400 Carya illinoinensis HOM05D007060 ORTHO05D009087 3.1e-207 725.3 502 68.9
CANSAT56G2168 Cannabis sativa HOM05D007060 ORTHO05D009087 6.1e-203 711.1 498 68.5
Potri.008G018200 Populus trichocarpa HOM05D007060 ORTHO05D009087 2.6e-201 705.7 499 68.7
Manes.07G085000 Manihot esculenta HOM05D007060 ORTHO05D009087 7.5e-201 704.1 493 69.0
Gorai.N007800 Gossypium raimondii HOM05D007060 ORTHO05D009087 1.7e-200 703.0 474 70.0
Cc02_g09400 Coffea canephora HOM05D007060 ORTHO05D009087 4.9e-200 701.4 504 69.0
Duzib106G1772 Durio zibethinus HOM05D007060 ORTHO05D009087 3.2e-199 698.7 479 69.3
Thecc.10G116400 Theobroma cacao HOM05D007060 ORTHO05D009087 1.9e-196 689.5 470 68.9
MD03G1165900 Malus domestica HOM05D007060 ORTHO05D009087 7.3e-196 687.6 498 65.5
TWI63G0697 Tripterygium wilfordii HOM05D007060 ORTHO05D009087 2.8e-195 685.6 501 66.5
RcHm_v2.0_Chr1g0331951 Rosa chinensis HOM05D007060 ORTHO05D009087 1.8e-194 682.9 499 66.3
Nn6g34700 Nelumbo nucifera HOM05D007060 ORTHO05D009087 1.2e-193 680.2 497 66.0
Glyma.10G195800 Glycine max HOM05D007060 ORTHO05D009087 6.0e-190 667.9 497 65.4
QL04p047886 Quercus lobata HOM05D007060 ORTHO05D009087 1.9e-188 662.9 402 76.6
Solyc11g006560.3 Solanum lycopersicum HOM05D007060 ORTHO05D009087 3.3e-188 662.1 503 65.0
Lj5g0018387 Lotus japonicus HOM05D007060 ORTHO05D009087 1.6e-187 659.8 496 64.3
PGSC0003DMG400001998 Solanum tuberosum HOM05D007060 ORTHO05D009087 1.6e-187 659.8 509 64.4
ClCG05G021920 Citrullus lanatus HOM05D007060 ORTHO05D009087 3.4e-185 652.1 500 62.2
Lj3P923T49 Lonicera japonica HOM05D007060 ORTHO05D009087 1.7e-184 649.8 404 75.0
Aqoxy1G00669 Aquilegia oxysepala HOM05D007060 ORTHO05D009087 2.9e-184 649.0 502 63.9
Thhalv10020598m.g Eutrema salsugineum HOM05D007060 ORTHO05D009087 1.4e-183 646.7 492 65.2
Dinv08415 Davidia involucrata HOM05D007060 ORTHO05D009087 3.2e-183 645.6 360 80.8
Sabra08G0011800 Salix brachista HOM05D007060 ORTHO05D009087 1.2e-182 643.7 400 74.2
MSTRG.9036 Avicennia marina HOM05D007060 ORTHO05D009087 1.6e-182 643.3 502 62.9
Atru.chr12.1066 Acer truncatum HOM05D007060 ORTHO05D009087 2.1e-182 642.9 400 74.0
AL3G22100 Arabidopsis lyrata HOM05D007060 ORTHO05D009087 2.7e-182 642.5 496 63.7
Rhsim03G0096200 Rhododendron simsii HOM05D007060 ORTHO05D009087 2.7e-182 642.5 404 76.2
Hma1.2p1_0457F.1_g156870 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 3.5e-182 642.1 400 75.0
Carub.0003s0986 Capsella rubella HOM05D007060 ORTHO05D009087 6.0e-182 641.3 479 64.9
Medtr1g090540 Medicago truncatula HOM05D007060 ORTHO05D009087 7.8e-182 641.0 500 62.8
AT3G10630 Arabidopsis thaliana HOM05D007060 ORTHO05D009087 1.0e-181 640.6 496 63.3
Oeu033276.1 Olea europaea HOM05D007060 ORTHO05D009087 1.3e-181 640.2 415 71.6
TPR.G37861 Trifolium pratense HOM05D007060 ORTHO05D009087 3.0e-181 639.0 499 62.5
Psat6g172000 Pisum sativum HOM05D007060 ORTHO05D009087 3.9e-181 638.6 499 63.3
Sp3g08940 Schrenkiella parvula HOM05D007060 ORTHO05D009087 1.1e-180 637.1 494 63.6
GSVIVG01034635001 Vitis vinifera HOM05D007060 ORTHO05D009087 3.3e-180 635.6 398 74.6
VMungo0720G1293 Vigna mungo HOM05D007060 ORTHO05D009087 7.3e-180 634.4 502 63.3
Sopen11g002500 Solanum pennellii HOM05D007060 ORTHO05D009087 2.8e-179 632.5 409 72.1
MELO3C012336.2 Cucumis melo HOM05D007060 ORTHO05D009087 3.1e-178 629.0 501 61.7
CsaV3_5G035220 Cucumis sativus L. HOM05D007060 ORTHO05D009087 3.1e-178 629.0 501 61.5
THA.LOC104816472 Tarenaya hassleriana HOM05D007060 ORTHO05D009087 1.2e-177 627.1 501 62.5
CARHR085210 Cardamine hirsuta HOM05D007060 ORTHO05D009087 2.6e-177 625.9 479 64.3
Ciclev10015484m.g Citrus clementina HOM05D007060 ORTHO05D009087 4.4e-177 625.2 400 73.0
Migut.F00850 Erythranthe guttata HOM05D007060 ORTHO05D009087 4.4e-177 625.2 500 60.4
PGR142G1122 Punica granatum HOM05D007060 ORTHO05D009087 7.6e-177 624.4 507 61.1
COL.COLO4_07825 Corchorus olitorius HOM05D007060 ORTHO05D009087 9.9e-177 624.0 405 70.4
Gohir.D06G177400 Gossypium hirsutum HOM05D007060 ORTHO05D009087 1.1e-175 620.5 378 73.8
HanXRQChr02g0053541 Helianthus annuus HOM05D007060 ORTHO05D009087 1.9e-175 619.8 474 63.9
Sed0007060 Sechium edule HOM05D007060 ORTHO05D009087 2.1e-174 616.3 495 59.4
A01p41570 Brassica napus HOM05D007060 ORTHO05D009087 3.5e-174 615.5 487 62.6
BolC1t05373H Brassica oleracea HOM05D007060 ORTHO05D009087 3.5e-174 615.5 494 61.7
Cpa.g.sc54.25 Carica papaya HOM05D007060 ORTHO05D009087 6.0e-174 614.8 400 70.2
Actinidia03837 Actinidia chinensis HOM05D007060 ORTHO05D009087 8.7e-173 610.9 350 82.6
CAN.G143.24 Capsicum annuum HOM05D007060 ORTHO05D009087 1.1e-172 610.5 400 71.2
BraA01t04232Z Brassica rapa HOM05D007060 ORTHO05D009087 2.5e-172 609.4 487 62.0
Lsat_1_v5_gn_2_105821 Lactuca sativa HOM05D007060 ORTHO05D009087 1.6e-171 606.7 402 70.1
Nitab4.5_0001781g0140 Nicotiana tabacum HOM05D007060 ORTHO05D009087 2.8e-171 605.9 401 70.8
Phvul.007G138500 Phaseolus vulgaris HOM05D007060 ORTHO05D009087 2.8e-171 605.9 400 70.2
Peaxi162Scf00725g00056 Petunia axillaris HOM05D007060 ORTHO05D010136 4.0e-170 602.1 396 71.5
Ca_10429_v3 Cicer arietinum L. HOM05D007060 ORTHO05D009087 1.2e-169 600.5 393 71.5
Nitab4.5_0007799g0060 Nicotiana tabacum HOM05D007060 ORTHO05D009087 2.0e-169 599.7 502 60.2
PGR142G0278 Punica granatum HOM05D007060 ORTHO05D009087 4.4e-169 598.6 506 59.5
ECA238G3502 Erigeron canadensis HOM05D007060 ORTHO05D009087 4.2e-167 592.0 403 68.0
DCAR_005120 Daucus carota HOM05D007060 ORTHO05D009087 2.7e-166 589.3 370 73.2
unitig_46.g18644 Utricularia gibba HOM05D007060 ORTHO05D009087 3.1e-162 575.9 499 56.9
Sopen11g002480 Solanum pennellii HOM05D007060 ORTHO05D009087 9.3e-159 564.3 359 72.4
Sopen11g002460 Solanum pennellii HOM05D007060 ORTHO05D009087 1.2e-158 563.9 372 70.2
Os09g0296700 Oryza sativa ssp. japonica HOM05D007060 ORTHO05D009087 3.0e-157 559.3 443 60.5
SalBow1G5690 Salvia bowleyana HOM05D007060 ORTHO05D009087 1.1e-156 557.4 430 62.8
SEGI_33772 Sequoiadendron giganteum HOM05D007060 ORTHO05D009087 8.1e-155 551.2 510 55.3
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 1.1e-154 550.8 391 65.5
ATR0772G206 Amborella trichopoda HOM05D007060 ORTHO05D009087 2.0e-153 546.6 508 54.9
Eucgr.G02680 Eucalyptus grandis HOM05D007060 ORTHO05D009087 4.6e-150 535.4 350 69.7
BcaB04g21186 Brassica carinata HOM05D007060 ORTHO05D009087 1.8e-149 533.5 478 57.9
Zm00001eb309100 Zea mays HOM05D007060 ORTHO05D009087 1.8e-149 533.5 459 57.5
SMO203G0203 Selaginella moellendorffii HOM05D007060 ORTHO05D009087 9.1e-130 468.0 391 57.0
AagrBONN_evm.TU.Sc2ySwM_344.3615 Anthoceros agrestis HOM05D007060 ORTHO05D009087 2.6e-129 466.5 386 58.5
Lalb_Chr21g0312821 Lupinus albus HOM05D007060 ORTHO05D009087 1.5e-124 450.7 293 72.7
Glyma.20G194300 Glycine max HOM05D007060 ORTHO05D009087 2.5e-119 433.3 477 50.5
SHI22512 Sapria himalayana HOM05D007060 ORTHO05D009087 1.0e-117 427.9 353 59.5
Pp3c6_17860 Physcomitrium patens HOM05D007060 ORTHO05D009087 1.4e-109 401.0 407 49.4
CBR_g29369 Chara braunii HOM05D007060 ORTHO05D009087 5.5e-95 352.4 296 56.8
Hma1.2p1_0826F.1_g224930 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 1.2e-89 334.7 209 74.2
MCO11G427 Micromonas commoda HOM05D007060 ORTHO05D009087 1.8e-85 320.9 433 39.7
Cre02.g118801 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 2.4e-82 310.5 443 39.3
PRCOL_00001658 Prasinoderma coloniale HOM05D007060 ORTHO05D009087 5.6e-71 272.7 447 36.7
TAR625G0310 Trochodendron aralioides HOM05D007060 ORTHO05D009087 1.4e-66 258.1 302 45.7
FAN24G3568 Fragaria x ananassa HOM05D007060 ORTHO05D009087 7.3e-63 245.7 399 38.1
FvH4_5g28400 Fragaria vesca HOM05D007060 ORTHO05D009087 2.4e-61 240.7 162 69.1
HPP92_006362 Vanilla planifolia HOM05D007060 ORTHO05D009087 1.1e-42 178.7 224 47.3
Cre09.g386732 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 3.5e-41 173.7 322 31.1
FAN03G2415 Fragaria x ananassa HOM05D007060 ORTHO05D009087 1.2e-28 132.1 100 66.0
PRCOL_00006151 Prasinoderma coloniale HOM05D007060 ORTHO05D048979 1.2e-28 132.1 308 32.5
MCO05G161 Micromonas commoda HOM05D007060 ORTHO05D048979 1.5e-23 115.2 299 28.8
MBI01_g04536_MAGBIO Magnolia biondii HOM05D007060 ORTHO05D009087 4.2e-18 97.1 73 64.4
AL1G24060 Arabidopsis lyrata HOM05D007060 ORTHO05D023607 6.7e-16 89.7 59 64.4
CBR_g29367 Chara braunii HOM05D007060 ORTHO05D009087 9.4e-10 69.3 89 40.4


User provided reference genes

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