Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040185 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 7.7e-132 473.8 232 100.0
CSS0045228 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 6.5e-99 364.4 234 80.3
CSS0033678 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 6.6e-75 284.6 217 69.1
CSS0011924 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006706 1.3e-46 190.7 111 81.1
CSS0045721 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 1.2e-44 184.1 126 72.2
CSS0049472 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 1.6e-41 173.7 163 64.4
CSS0009587 Camellia sinensis var. sinensis HOM05D009091 ORTHO05D003768 3.5e-36 156.0 120 66.7
CSS0011469 Camellia sinensis var. sinensis HOM05D009091 ORTHO05D003768 3.5e-36 156.0 120 66.7
CSS0010964 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 2.5e-29 133.3 136 57.4
CSS0038469 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 2.3e-27 126.7 152 54.6
CSS0021689 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 9.7e-26 121.3 154 51.9
Atru.chr7.467 Acer truncatum HOM05D000107 ORTHO05D000062 1.8e-24 117.1 204 36.8
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 1.9e-21 107.1 199 38.7
FvH4_6g35541 Fragaria vesca HOM05D009091 ORTHO05D003768 4.2e-21 105.9 258 29.8
FvH4_3g45091 Fragaria vesca HOM05D009091 ORTHO05D003768 5.5e-21 105.5 227 33.9
FvH4_5g18843 Fragaria vesca HOM05D008321 ORTHO05D003768 2.7e-20 103.2 222 34.2
RcHm_v2.0_Chr2g0134701 Rosa chinensis HOM05D009091 ORTHO05D003768 2.7e-20 103.2 235 32.3
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 3.6e-20 102.8 242 30.6
MELO3C028846.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.1e-20 102.1 185 34.6
FAN18G4094 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.0e-19 101.3 222 34.2
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 1.0e-19 101.3 178 36.5
ClCG07G007700 Citrullus lanatus HOM05D007314 ORTHO05D003768 3.0e-19 99.8 195 35.4
MELO3C027594.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.0e-19 99.8 212 31.6
MELO3C028271.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.3e-18 95.9 179 34.6
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 4.3e-18 95.9 198 33.8
Atru.chr2.2530 Acer truncatum HOM05D001899 ORTHO05D001858 2.8e-17 93.2 85 52.9
FvH4_2g07142 Fragaria vesca HOM05D008321 ORTHO05D003768 4.8e-17 92.4 216 31.5
FvH4_4g10040 Fragaria vesca HOM05D009091 ORTHO05D003768 4.8e-17 92.4 247 30.4
FvH4_6g17382 Fragaria vesca HOM05D008321 ORTHO05D003768 6.3e-17 92.0 227 31.7
FAN19G2766 Fragaria x ananassa HOM05D008321 ORTHO05D003768 8.2e-17 91.7 240 29.2
Oeu041304.1 Olea europaea HOM05D009091 ORTHO05D003768 8.2e-17 91.7 170 37.1
MELO3C008679.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.4e-16 90.9 195 33.3
MELO3C031887.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.4e-16 90.9 172 34.9
RcHm_v2.0_Chr1g0315701 Rosa chinensis HOM05D009091 ORTHO05D003768 2.4e-16 90.1 263 29.3
Oeu047507.2 Olea europaea HOM05D007314 ORTHO05D003768 5.3e-16 89.0 138 40.6
MELO3C030512.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.9e-16 88.6 178 33.1
MELO3C030144.2 Cucumis melo HOM05D007314 ORTHO05D003768 9.1e-16 88.2 73 56.2
FvH4_4g06631 Fragaria vesca HOM05D008321 ORTHO05D003768 1.5e-15 87.4 213 30.0
CSS0033653 Camellia sinensis var. sinensis HOM05D034359 ORTHO05D003768 2.0e-15 87.0 114 47.4
MELO3C032718.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.0e-15 87.0 75 56.0
MELO3C028434.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.6e-15 86.7 80 50.0
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 5.9e-15 85.5 195 32.3
MELO3C035305.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.9e-15 85.5 193 31.6
FvH4_2g08144 Fragaria vesca HOM05D008321 ORTHO05D003768 5.9e-15 85.5 192 32.3
MELO3C001336.2 Cucumis melo HOM05D007314 ORTHO05D003768 7.7e-15 85.1 73 50.7
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 7.7e-15 85.1 79 50.6
FAN21G1044 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.3e-14 84.3 198 30.8
Sed0009392 Sechium edule HOM05D007314 ORTHO05D003768 1.3e-14 84.3 188 31.9
Atru.chr4.2623 Acer truncatum HOM05D008321 ORTHO05D003768 1.7e-14 84.0 198 31.3
FvH4_5g23172 Fragaria vesca HOM05D008321 ORTHO05D003768 2.9e-14 83.2 196 34.7
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 5.0e-14 82.4 74 51.4
FvH4_6g20172 Fragaria vesca HOM05D008321 ORTHO05D003768 8.5e-14 81.6 80 50.0
RcHm_v2.0_Chr3g0492801 Rosa chinensis HOM05D007314 ORTHO05D003768 1.4e-13 80.9 96 43.8
MELO3C029981.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.9e-13 80.5 80 48.8
MELO3C030644.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.9e-13 80.5 165 34.5
FvH4_4g16173 Fragaria vesca HOM05D008321 ORTHO05D003768 1.9e-13 80.5 240 29.6
RcHm_v2.0_Chr5g0064801 Rosa chinensis HOM05D007314 ORTHO05D003768 1.9e-13 80.5 74 50.0
CSS0018917 Camellia sinensis var. sinensis HOM05D034359 ORTHO05D003768 3.2e-13 79.7 97 50.5
CSS0036287 Camellia sinensis var. sinensis HOM05D034359 ORTHO05D003768 3.2e-13 79.7 97 50.5
MELO3C032996.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.2e-13 79.3 70 55.7
RcHm_v2.0_Chr1g0313071 Rosa chinensis HOM05D009091 ORTHO05D003768 4.2e-13 79.3 77 49.4
C09p36000 Brassica napus HOM05D007314 ORTHO05D003768 5.5e-13 79.0 75 50.7
FvH4_3g32731 Fragaria vesca HOM05D008321 ORTHO05D003768 5.5e-13 79.0 224 31.7
FvH4_1g29373 Fragaria vesca HOM05D008321 ORTHO05D003768 7.2e-13 78.6 80 47.5
FvH4_4g03221 Fragaria vesca HOM05D000014 ORTHO05D000016 7.2e-13 78.6 191 32.5
RcHm_v2.0_Chr4g0444771 Rosa chinensis HOM05D007314 ORTHO05D003768 9.4e-13 78.2 74 50.0
RcHm_v2.0_Chr5g0060161 Rosa chinensis HOM05D009091 ORTHO05D003768 9.4e-13 78.2 84 46.4
RcHm_v2.0_Chr1g0318841 Rosa chinensis HOM05D009091 ORTHO05D003768 1.2e-12 77.8 77 48.1
Oeu040990.1 Olea europaea HOM05D000700 ORTHO05D000397 2.1e-12 77.0 134 33.6
RcHm_v2.0_Chr5g0059371 Rosa chinensis HOM05D007314 ORTHO05D003768 2.1e-12 77.0 72 50.0
FAN07G1302 Fragaria x ananassa HOM05D008321 ORTHO05D003768 3.6e-12 76.3 82 47.6
MELO3C033672.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.1e-12 75.5 174 33.3
FvH4_1g29233 Fragaria vesca HOM05D008321 ORTHO05D003768 7.9e-12 75.1 206 30.6
MELO3C035542.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.0e-11 74.7 79 43.0
MELO3C029411.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.8e-11 73.9 126 39.7
RcHm_v2.0_Chr1g0326261 Rosa chinensis HOM05D009091 ORTHO05D003768 1.8e-11 73.9 64 53.1
MELO3C029040.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.0e-11 73.2 79 45.6
CsaV3_7G021120 Cucumis sativus L. HOM05D007314 ORTHO05D003768 3.0e-11 73.2 61 49.2
FvH4_4g12371 Fragaria vesca HOM05D007314 ORTHO05D003768 3.0e-11 73.2 73 46.6
RcHm_v2.0_Chr3g0496641 Rosa chinensis HOM05D009091 ORTHO05D003768 3.0e-11 73.2 80 47.5
CANSAT35G0660 Cannabis sativa HOM05D007314 ORTHO05D003768 3.9e-11 72.8 172 29.7
RcHm_v2.0_Chr0c28g0501051 Rosa chinensis HOM05D008321 ORTHO05D003768 3.9e-11 72.8 82 41.5
CANSAT25G2929 Cannabis sativa HOM05D007314 ORTHO05D003768 1.5e-10 70.9 191 29.8
FvH4_3g21852 Fragaria vesca HOM05D008321 ORTHO05D003768 2.0e-10 70.5 80 41.2
FAN15G1405 Fragaria x ananassa HOM05D008321 ORTHO05D003768 3.3e-10 69.7 75 46.7
RcHm_v2.0_Chr7g0200591 Rosa chinensis HOM05D007314 ORTHO05D003768 3.3e-10 69.7 73 46.6
FvH4_6g21082 Fragaria vesca HOM05D007314 ORTHO05D003768 4.4e-10 69.3 59 52.5
Aqoxy4G01546 Aquilegia oxysepala HOM05D003464 ORTHO05D003170 5.7e-10 68.9 239 23.8
Aqoxy3G03529 Aquilegia oxysepala HOM05D007314 ORTHO05D003768 7.4e-10 68.6 85 37.6
Aqoxy5G02986 Aquilegia oxysepala HOM05D007314 ORTHO05D000285 1.3e-09 67.8 85 37.6
CsaV3_4G009050 Cucumis sativus L. HOM05D007314 ORTHO05D003768 1.3e-09 67.8 72 43.1
Aqoxy1G03593 Aquilegia oxysepala HOM05D003464 ORTHO05D003170 2.8e-09 66.6 188 24.5
RcHm_v2.0_Chr6g0280321 Rosa chinensis HOM05D009091 ORTHO05D003768 6.3e-09 65.5 66 48.5
MELO3C029576.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.8e-08 63.9 159 31.4
MELO3C035437.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.8e-08 63.9 121 38.8
FvH4_4g01311 Fragaria vesca HOM05D007314 ORTHO05D003768 1.5e-07 60.8 71 47.9
Oeu060777.1 Olea europaea HOM05D009091 ORTHO05D003768 1.5e-07 60.8 133 30.8
Aqoxy4G01428 Aquilegia oxysepala HOM05D029945 ORTHO05D003170 2.6e-07 60.1 141 31.2
BolC2t08290H Brassica oleracea HOM05D007314 ORTHO05D003768 2.6e-07 60.1 78 41.0
FvH4_4g17212 Fragaria vesca HOM05D008321 ORTHO05D003768 3.4e-07 59.7 144 27.1
Oeu048290.1 Olea europaea HOM05D009091 ORTHO05D003768 3.4e-07 59.7 48 56.2
Oeu050751.1 Olea europaea HOM05D009091 ORTHO05D003768 3.4e-07 59.7 58 50.0
CANSAT25G1818 Cannabis sativa HOM05D007314 ORTHO05D003768 5.9e-07 58.9 132 34.1
FAN12G0755 Fragaria x ananassa HOM05D008321 ORTHO05D003768 5.9e-07 58.9 137 27.7
PSO675G1909 Papaver somniferum HOM05D008526 ORTHO05D010380 5.9e-07 58.9 153 28.1
Aqoxy3G00744 Aquilegia oxysepala HOM05D053128 ORTHO05D003768 1.0e-06 58.2 97 38.1
FvH4_5g18423 Fragaria vesca HOM05D009091 ORTHO05D000062 1.0e-06 58.2 137 33.6
Oeu007614.1 Olea europaea HOM05D009091 ORTHO05D003768 1.0e-06 58.2 50 52.0
PSO339G2614 Papaver somniferum HOM05D008526 ORTHO05D010380 1.0e-06 58.2 203 22.2
BolC2t10485H Brassica oleracea HOM05D007314 ORTHO05D003768 1.7e-06 57.4 84 36.9
Aqoxy2G01330 Aquilegia oxysepala HOM05D000167 ORTHO05D003170 3.8e-06 56.2 232 22.4
Ca_02221_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 3.8e-06 56.2 239 26.8
Ca_04791_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 3.8e-06 56.2 239 26.8
Ca_05353_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 3.8e-06 56.2 239 26.8
Ca_12950_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 3.8e-06 56.2 239 26.8
Ca_18593_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 3.8e-06 56.2 239 26.8
Ca_19281_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 3.8e-06 56.2 239 26.8
Ca_26256_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 3.8e-06 56.2 239 26.8
RcHm_v2.0_Chr4g0433611 Rosa chinensis HOM05D009091 ORTHO05D003768 3.8e-06 56.2 125 36.8
Prupe.7G026800 Prunus persica HOM05D000539 ORTHO05D000592 5.0e-06 55.8 70 45.7


User provided reference genes

Program Settings