Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040116 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.0e-303 1043.9 500 100.0
CSS0035496 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.8e-302 1040.0 500 99.6
CSS0031015 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 6.4e-301 1036.6 500 99.2
CSS0040194 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.1e-300 1033.9 500 99.0
CSS0037937 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.5e-297 1025.4 500 98.2
CSS0046160 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.4e-295 1018.8 500 97.6
CSS0037157 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.4e-295 1018.1 500 97.6
CSS0002387 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.8e-294 1013.4 500 97.2
CSS0014623 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.8e-294 1013.4 500 97.0
CSS0035234 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 9.9e-294 1012.7 500 97.2
CSS0019796 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.9e-293 1010.4 500 96.8
CSS0028923 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 8.4e-293 1009.6 500 96.8
CSS0005765 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 7.1e-292 1006.5 500 96.2
Prupe.4G266300 Prunus persica HOM05D007060 ORTHO05D009087 5.5e-212 741.1 500 70.6
TAR623G0941 Trochodendron aralioides HOM05D007060 ORTHO05D009087 9.5e-212 740.3 509 69.9
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 4.5e-206 721.5 499 69.5
CiPaw.13G043400 Carya illinoinensis HOM05D007060 ORTHO05D009087 7.8e-206 720.7 502 68.1
Manes.07G085000 Manihot esculenta HOM05D007060 ORTHO05D009087 5.2e-202 708.0 493 69.0
CANSAT56G2168 Cannabis sativa HOM05D007060 ORTHO05D009087 1.5e-201 706.4 498 67.9
Potri.008G018200 Populus trichocarpa HOM05D007060 ORTHO05D009087 3.4e-201 705.3 501 69.1
Duzib106G1772 Durio zibethinus HOM05D007060 ORTHO05D009087 5.4e-199 698.0 479 68.9
Gorai.N007800 Gossypium raimondii HOM05D007060 ORTHO05D009087 2.0e-198 696.0 474 69.2
Cc02_g09400 Coffea canephora HOM05D007060 ORTHO05D009087 2.7e-198 695.7 504 68.5
Thecc.10G116400 Theobroma cacao HOM05D007060 ORTHO05D009087 4.3e-196 688.3 470 68.5
MD03G1165900 Malus domestica HOM05D007060 ORTHO05D009087 2.8e-195 685.6 498 65.1
TWI63G0697 Tripterygium wilfordii HOM05D007060 ORTHO05D009087 8.0e-195 684.1 501 66.1
Nn6g34700 Nelumbo nucifera HOM05D007060 ORTHO05D009087 2.3e-194 682.6 497 66.2
RcHm_v2.0_Chr1g0331951 Rosa chinensis HOM05D007060 ORTHO05D009087 5.8e-193 677.9 499 65.7
Solyc11g006560.3 Solanum lycopersicum HOM05D007060 ORTHO05D009087 1.0e-189 667.2 503 65.0
Glyma.10G195800 Glycine max HOM05D007060 ORTHO05D009087 5.1e-189 664.8 497 65.0
PGSC0003DMG400001998 Solanum tuberosum HOM05D007060 ORTHO05D009087 5.1e-189 664.8 509 64.4
QL04p047886 Quercus lobata HOM05D007060 ORTHO05D009087 2.8e-187 659.1 402 75.9
Lj5g0018387 Lotus japonicus HOM05D007060 ORTHO05D009087 3.6e-187 658.7 496 63.9
Lj3P923T49 Lonicera japonica HOM05D007060 ORTHO05D009087 2.9e-184 649.0 404 74.5
Aqoxy1G00669 Aquilegia oxysepala HOM05D007060 ORTHO05D009087 1.1e-183 647.1 502 63.5
ClCG05G021920 Citrullus lanatus HOM05D007060 ORTHO05D009087 1.4e-183 646.7 500 61.6
Thhalv10020598m.g Eutrema salsugineum HOM05D007060 ORTHO05D009087 2.4e-183 646.0 492 65.0
Atru.chr12.1066 Acer truncatum HOM05D007060 ORTHO05D009087 4.1e-183 645.2 400 74.2
Sabra08G0011800 Salix brachista HOM05D007060 ORTHO05D009087 5.4e-183 644.8 400 74.2
Rhsim03G0096200 Rhododendron simsii HOM05D007060 ORTHO05D009087 7.1e-183 644.4 404 76.0
Dinv08415 Davidia involucrata HOM05D007060 ORTHO05D009087 9.2e-183 644.0 360 80.6
Hma1.2p1_0457F.1_g156870 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 1.2e-182 643.7 400 74.8
AL3G22100 Arabidopsis lyrata HOM05D007060 ORTHO05D009087 7.8e-182 641.0 496 63.3
Carub.0003s0986 Capsella rubella HOM05D007060 ORTHO05D009087 1.3e-181 640.2 479 64.5
MSTRG.9036 Avicennia marina HOM05D007060 ORTHO05D009087 2.3e-181 639.4 502 62.4
AT3G10630 Arabidopsis thaliana HOM05D007060 ORTHO05D009087 3.0e-181 639.0 496 62.9
Medtr1g090540 Medicago truncatula HOM05D007060 ORTHO05D009087 3.9e-181 638.6 500 62.4
Oeu033276.1 Olea europaea HOM05D007060 ORTHO05D009087 8.6e-181 637.5 411 72.0
GSVIVG01034635001 Vitis vinifera HOM05D007060 ORTHO05D009087 8.6e-181 637.5 398 74.4
Sopen11g002500 Solanum pennellii HOM05D007060 ORTHO05D009087 1.1e-180 637.1 425 70.1
TPR.G37861 Trifolium pratense HOM05D007060 ORTHO05D009087 1.1e-180 637.1 499 62.1
Sp3g08940 Schrenkiella parvula HOM05D007060 ORTHO05D009087 3.3e-180 635.6 494 63.0
Psat6g172000 Pisum sativum HOM05D007060 ORTHO05D009087 2.1e-179 632.9 499 62.7
VMungo0720G1293 Vigna mungo HOM05D007060 ORTHO05D009087 3.6e-179 632.1 502 62.9
MELO3C012336.2 Cucumis melo HOM05D007060 ORTHO05D009087 1.2e-177 627.1 501 61.3
CsaV3_5G035220 Cucumis sativus L. HOM05D007060 ORTHO05D009087 1.2e-177 627.1 501 61.1
Ciclev10015484m.g Citrus clementina HOM05D007060 ORTHO05D009087 1.5e-177 626.7 400 72.8
THA.LOC104816472 Tarenaya hassleriana HOM05D007060 ORTHO05D009087 2.0e-177 626.3 501 62.5
COL.COLO4_07825 Corchorus olitorius HOM05D007060 ORTHO05D009087 2.6e-177 625.9 405 70.1
CARHR085210 Cardamine hirsuta HOM05D007060 ORTHO05D009087 7.6e-177 624.4 479 63.9
Migut.F00850 Erythranthe guttata HOM05D007060 ORTHO05D009087 2.9e-176 622.5 500 59.8
PGR142G1122 Punica granatum HOM05D007060 ORTHO05D009087 8.4e-176 620.9 507 60.7
HanXRQChr02g0053541 Helianthus annuus HOM05D007060 ORTHO05D009087 4.2e-175 618.6 472 63.8
Sed0007060 Sechium edule HOM05D007060 ORTHO05D009087 4.2e-175 618.6 495 59.2
Gohir.D06G177400 Gossypium hirsutum HOM05D007060 ORTHO05D009087 2.1e-174 616.3 378 73.0
A01p41570 Brassica napus HOM05D007060 ORTHO05D009087 7.8e-174 614.4 487 62.2
Actinidia03837 Actinidia chinensis HOM05D007060 ORTHO05D009087 3.0e-173 612.5 350 82.3
BolC1t05373H Brassica oleracea HOM05D007060 ORTHO05D009087 3.0e-173 612.5 494 61.3
CAN.G143.24 Capsicum annuum HOM05D007060 ORTHO05D009087 3.9e-173 612.1 400 71.0
Cpa.g.sc54.25 Carica papaya HOM05D007060 ORTHO05D009087 5.1e-173 611.7 400 69.8
Nitab4.5_0001781g0140 Nicotiana tabacum HOM05D007060 ORTHO05D009087 9.6e-172 607.4 401 70.6
BraA01t04232Z Brassica rapa HOM05D007060 ORTHO05D009087 3.6e-171 605.5 487 61.6
Lsat_1_v5_gn_2_105821 Lactuca sativa HOM05D007060 ORTHO05D009087 8.1e-171 604.4 402 69.4
Peaxi162Scf00725g00056 Petunia axillaris HOM05D007060 ORTHO05D010136 1.1e-170 604.0 396 71.2
Phvul.007G138500 Phaseolus vulgaris HOM05D007060 ORTHO05D009087 1.8e-170 603.2 400 69.8
Nitab4.5_0007799g0060 Nicotiana tabacum HOM05D007060 ORTHO05D009087 5.3e-170 601.7 502 60.0
Ca_10429_v3 Cicer arietinum L. HOM05D007060 ORTHO05D009087 7.6e-169 597.8 393 71.0
PGR142G0278 Punica granatum HOM05D007060 ORTHO05D009087 4.9e-168 595.1 506 59.1
DCAR_005120 Daucus carota HOM05D007060 ORTHO05D009087 7.1e-167 591.3 370 73.0
ECA238G3502 Erigeron canadensis HOM05D007060 ORTHO05D009087 1.2e-166 590.5 403 67.5
unitig_46.g18644 Utricularia gibba HOM05D007060 ORTHO05D009087 2.6e-161 572.8 499 56.5
Sopen11g002460 Solanum pennellii HOM05D007060 ORTHO05D009087 3.2e-159 565.8 372 69.9
Sopen11g002480 Solanum pennellii HOM05D007060 ORTHO05D009087 2.7e-158 562.8 359 72.1
Os09g0296700 Oryza sativa ssp. japonica HOM05D007060 ORTHO05D009087 1.0e-157 560.8 443 60.3
SalBow1G5690 Salvia bowleyana HOM05D007060 ORTHO05D009087 4.3e-156 555.4 430 62.3
SEGI_33772 Sequoiadendron giganteum HOM05D007060 ORTHO05D009087 3.1e-154 549.3 510 54.9
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 5.3e-154 548.5 391 65.2
ATR0772G206 Amborella trichopoda HOM05D007060 ORTHO05D009087 7.6e-153 544.7 508 54.7
BcaB04g21186 Brassica carinata HOM05D007060 ORTHO05D009087 3.9e-149 532.3 478 57.5
Zm00001eb309100 Zea mays HOM05D007060 ORTHO05D009087 3.9e-149 532.3 459 57.5
Eucgr.G02680 Eucalyptus grandis HOM05D007060 ORTHO05D009087 6.7e-149 531.6 350 68.9
AagrBONN_evm.TU.Sc2ySwM_344.3615 Anthoceros agrestis HOM05D007060 ORTHO05D009087 5.9e-129 465.3 386 58.3
SMO203G0203 Selaginella moellendorffii HOM05D007060 ORTHO05D009087 5.9e-129 465.3 391 56.8
Lalb_Chr21g0312821 Lupinus albus HOM05D007060 ORTHO05D009087 3.3e-124 449.5 293 72.4
Glyma.20G194300 Glycine max HOM05D007060 ORTHO05D009087 7.2e-119 431.8 477 50.3
SHI22512 Sapria himalayana HOM05D007060 ORTHO05D009087 3.0e-117 426.4 353 59.2
Pp3c6_17860 Physcomitrium patens HOM05D007060 ORTHO05D009087 6.8e-109 398.7 407 48.9
CBR_g29369 Chara braunii HOM05D007060 ORTHO05D009087 9.5e-95 351.7 296 57.1
Hma1.2p1_0826F.1_g224930 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 1.4e-90 337.8 209 74.2
MCO11G427 Micromonas commoda HOM05D007060 ORTHO05D009087 8.9e-85 318.5 433 39.3
Cre02.g118801 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 1.0e-80 305.1 442 39.1
PRCOL_00001658 Prasinoderma coloniale HOM05D007060 ORTHO05D009087 3.6e-70 270.0 445 36.6
TAR625G0310 Trochodendron aralioides HOM05D007060 ORTHO05D009087 4.1e-66 256.5 302 45.4
FAN24G3568 Fragaria x ananassa HOM05D007060 ORTHO05D009087 5.6e-63 246.1 399 38.3
FvH4_5g28400 Fragaria vesca HOM05D007060 ORTHO05D009087 6.8e-61 239.2 162 68.5
HPP92_006362 Vanilla planifolia HOM05D007060 ORTHO05D009087 1.4e-42 178.3 228 46.5
Cre09.g386732 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 1.6e-41 174.9 337 30.9
PRCOL_00006151 Prasinoderma coloniale HOM05D007060 ORTHO05D048979 6.9e-29 132.9 314 31.8
FAN03G2415 Fragaria x ananassa HOM05D007060 ORTHO05D009087 1.5e-28 131.7 100 66.0
MCO05G161 Micromonas commoda HOM05D007060 ORTHO05D048979 2.5e-23 114.4 297 29.0
MBI01_g04536_MAGBIO Magnolia biondii HOM05D007060 ORTHO05D009087 3.8e-19 100.5 73 64.4
AL1G24060 Arabidopsis lyrata HOM05D007060 ORTHO05D023607 2.5e-15 87.8 59 62.7
CBR_g29367 Chara braunii HOM05D007060 ORTHO05D009087 1.1e-10 72.4 98 39.8


User provided reference genes

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