Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040059 Camellia sinensis var. sinensis HOM05D008278 ORTHO05D009926 7.2e-25 116.7 70 100.0
Thecc.05G292500 Theobroma cacao HOM05D008278 ORTHO05D009926 2.3e-15 85.1 58 67.2
Dinv04275 Davidia involucrata HOM05D008278 ORTHO05D009926 1.5e-14 82.4 59 67.8
COL.COLO4_13623 Corchorus olitorius HOM05D008278 ORTHO05D009926 5.7e-14 80.5 61 65.6
Manes.09G159200 Manihot esculenta HOM05D008278 ORTHO05D009926 2.8e-13 78.2 61 67.2
Gohir.A11G257700 Gossypium hirsutum HOM05D010912 ORTHO05D009926 3.7e-13 77.8 58 63.8
Cc01_g20290 Coffea canephora HOM05D008278 ORTHO05D009926 2.2e-10 68.6 71 69.0
TWI09G1464 Tripterygium wilfordii HOM05D008278 ORTHO05D009926 2.2e-10 68.6 33 81.8
Gohir.A11G257600 Gossypium hirsutum HOM05D010912 ORTHO05D009926 6.5e-10 67.0 42 78.6
Gohir.D11G267600 Gossypium hirsutum HOM05D010912 ORTHO05D009926 6.5e-10 67.0 42 78.6
Gorai.007G287300 Gossypium raimondii HOM05D010912 ORTHO05D009926 6.5e-10 67.0 42 78.6
Phvul.006G097300 Phaseolus vulgaris HOM05D008278 ORTHO05D009926 1.1e-09 66.2 68 70.6
PGR119G0374 Punica granatum HOM05D008278 ORTHO05D009926 1.1e-09 66.2 33 75.8
Actinidia21077 Actinidia chinensis HOM05D008278 ORTHO05D009926 3.2e-09 64.7 48 75.0
Lj1g0017232 Lotus japonicus HOM05D008278 ORTHO05D009926 3.2e-09 64.7 95 48.4
Duzib151G0456 Durio zibethinus HOM05D008278 ORTHO05D009926 9.4e-09 63.2 89 56.2
Psat3g024600 Pisum sativum HOM05D008278 ORTHO05D009926 9.4e-09 63.2 75 60.0
GSVIVG01021911001 Vitis vinifera HOM05D008278 ORTHO05D009926 1.2e-08 62.8 63 61.9
MD04G1216200 Malus domestica HOM05D010912 ORTHO05D009926 2.1e-08 62.0 33 75.8
RcHm_v2.0_Chr3g0452671 Rosa chinensis HOM05D010912 ORTHO05D009926 2.1e-08 62.0 30 80.0
Hma1.2p1_0209F.1_g089030 Hydrangea macrophylla HOM05D008278 ORTHO05D009926 6.1e-08 60.5 91 45.1
Thecc.04G277500 Theobroma cacao HOM05D008278 ORTHO05D009926 1.0e-07 59.7 69 52.2
FAN14G0650 Fragaria x ananassa HOM05D010912 ORTHO05D009926 2.3e-07 58.5 29 75.9
QL03p001140 Quercus lobata HOM05D010912 ORTHO05D009926 2.3e-07 58.5 33 72.7
CiPaw.07G100700 Carya illinoinensis HOM05D008278 ORTHO05D009926 3.0e-07 58.2 42 57.1
CiPaw.07G010500 Carya illinoinensis HOM05D010912 ORTHO05D009926 4.0e-07 57.8 30 73.3
Carub.0004s3061 Capsella rubella HOM05D008278 ORTHO05D009926 5.2e-07 57.4 42 59.5
PSO170G0879 Papaver somniferum HOM05D008278 ORTHO05D009926 5.2e-07 57.4 67 65.7
Duzib138G1619 Durio zibethinus HOM05D008278 ORTHO05D009926 6.7e-07 57.0 36 66.7
FAN05G5515 Fragaria x ananassa HOM05D010912 ORTHO05D009926 8.8e-07 56.6 28 75.0
Thecc.01G291200 Theobroma cacao HOM05D008278 ORTHO05D009926 8.8e-07 56.6 36 66.7
Dinv32998 Davidia involucrata HOM05D000003 ORTHO05D000126 1.2e-06 56.2 29 72.4
Actinidia24853 Actinidia chinensis HOM05D008278 ORTHO05D009926 1.5e-06 55.8 69 47.8
Manes.03G191100 Manihot esculenta HOM05D008278 ORTHO05D009926 1.5e-06 55.8 57 54.4
CiPaw.08G100100 Carya illinoinensis HOM05D008278 ORTHO05D009926 2.0e-06 55.5 73 58.9
FAN02G3698 Fragaria x ananassa HOM05D010912 ORTHO05D009926 2.0e-06 55.5 30 70.0
CANSAT78G0399 Cannabis sativa HOM05D008278 ORTHO05D009926 2.6e-06 55.1 25 80.0
Thhalv10001693m.g Eutrema salsugineum HOM05D008278 ORTHO05D009926 2.6e-06 55.1 49 53.1
PGR015G0009 Punica granatum HOM05D008278 ORTHO05D009926 2.6e-06 55.1 28 71.4
Cc03_g02370 Coffea canephora HOM05D008278 ORTHO05D009926 4.4e-06 54.3 53 45.3
vmacro14967 Vaccinium macrocarpon HOM05D008278 ORTHO05D009926 4.4e-06 54.3 31 67.7
Haze_04293 Corylus avellana HOM05D010912 ORTHO05D009926 5.7e-06 53.9 80 53.8
Eucgr.H04419 Eucalyptus grandis HOM05D010912 ORTHO05D009926 5.7e-06 53.9 38 63.2
Glyma.03G209200 Glycine max HOM05D008278 ORTHO05D009926 5.7e-06 53.9 39 59.0
Aqoxy5G00615 Aquilegia oxysepala HOM05D008278 ORTHO05D009926 7.5e-06 53.5 79 49.4
Glyma.13G215100 Glycine max HOM05D008278 ORTHO05D009926 7.5e-06 53.5 63 46.0
Psat0s1883g0120 Pisum sativum HOM05D008278 ORTHO05D009926 9.7e-06 53.1 73 61.6


User provided reference genes

Program Settings