Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040024 Camellia sinensis var. sinensis HOM05D006179 ORTHO05D008370 2.8e-35 151.4 75 100.0
CSS0020940 Camellia sinensis var. sinensis HOM05D006179 ORTHO05D008370 1.2e-30 136.0 68 98.5
Lj2C622G16 Lonicera japonica HOM05D006179 ORTHO05D008370 2.4e-26 121.7 68 86.8
Atru.chr3.2952 Acer truncatum HOM05D006179 ORTHO05D008370 4.1e-26 120.9 68 83.8
Atru.chr3.2957 Acer truncatum HOM05D006179 ORTHO05D008370 4.1e-26 120.9 68 83.8
Duzib170G0239 Durio zibethinus HOM05D006179 ORTHO05D008370 1.5e-25 119.0 68 82.4
Oeu061700.1 Olea europaea HOM05D006179 ORTHO05D008370 1.5e-25 119.0 65 84.6
vmacro14276 Vaccinium macrocarpon HOM05D006179 ORTHO05D008370 1.5e-25 119.0 68 83.8
Dinv36157 Davidia involucrata HOM05D006179 ORTHO05D008370 2.0e-25 118.6 68 85.3
Rhsim01G0195300 Rhododendron simsii HOM05D006179 ORTHO05D008370 2.6e-25 118.2 68 82.4
PGR119G2402 Punica granatum HOM05D006179 ORTHO05D008370 3.5e-25 117.9 68 82.4
RcHm_v2.0_Chr5g0050451 Rosa chinensis HOM05D006179 ORTHO05D008370 4.5e-25 117.5 68 80.9
SGA_v2.0_scaffold8G04541 Striga asiatica HOM05D006179 ORTHO05D008370 4.5e-25 117.5 68 83.8
Prupe.4G263800 Prunus persica HOM05D006179 ORTHO05D008370 7.7e-25 116.7 68 80.9
Hund21973 Selenicereus undatus HOM05D006179 ORTHO05D008370 7.7e-25 116.7 65 81.5
FvH4_3g27810 Fragaria vesca HOM05D006179 ORTHO05D008370 1.7e-24 115.5 68 80.9
FAN11G2659 Fragaria x ananassa HOM05D000059 ORTHO05D008370 1.7e-24 115.5 68 80.9
FAN21G1036 Fragaria x ananassa HOM05D006179 ORTHO05D008370 1.7e-24 115.5 68 80.9
FAN25G1664 Fragaria x ananassa HOM05D006179 ORTHO05D008370 1.7e-24 115.5 68 80.9
MD11G1184200 Malus domestica HOM05D006179 ORTHO05D008370 1.7e-24 115.5 68 80.9
Cc00_g17410 Coffea canephora HOM05D006179 ORTHO05D008370 2.9e-24 114.8 70 78.6
AUR62000204 Chenopodium quinoa HOM05D006179 ORTHO05D008370 3.8e-24 114.4 65 83.1
Hma1.2p1_0470F.1_g159226 Hydrangea macrophylla HOM05D006179 ORTHO05D008370 3.8e-24 114.4 65 83.1
DCAR_024400 Daucus carota HOM05D006179 ORTHO05D008370 5.0e-24 114.0 64 82.8
Sc16g0011000 Simmondsia chinensis HOM05D006179 ORTHO05D008370 5.0e-24 114.0 64 84.4
AUR62006552 Chenopodium quinoa HOM05D006179 ORTHO05D008370 6.5e-24 113.6 65 81.5
Solyc12g099800.2 Solanum lycopersicum HOM05D006179 ORTHO05D008370 6.5e-24 113.6 64 82.8
GSVIVG01037292001 Vitis vinifera HOM05D006179 ORTHO05D008370 6.5e-24 113.6 68 80.9
Nitab4.5_0002310g0120 Nicotiana tabacum HOM05D006179 ORTHO05D008370 8.5e-24 113.2 70 77.1
Potri.009G069300 Populus trichocarpa HOM05D006179 ORTHO05D008370 8.5e-24 113.2 69 81.2
Nitab4.5_0001290g0120 Nicotiana tabacum HOM05D006179 ORTHO05D008370 1.1e-23 112.8 68 79.4
Hund21974 Selenicereus undatus HOM05D006179 ORTHO05D008240 1.1e-23 112.8 65 78.5
PGSC0003DMG401004716 Solanum tuberosum HOM05D006179 ORTHO05D008370 1.1e-23 112.8 70 75.7
Sopen12g034430 Solanum pennellii HOM05D006179 ORTHO05D008370 1.4e-23 112.5 64 81.2
Cfa009884 Carpinus fangiana HOM05D006179 ORTHO05D008370 1.9e-23 112.1 68 80.9
AUR62040469 Chenopodium quinoa HOM05D006179 ORTHO05D008370 2.5e-23 111.7 65 83.1
AUR62037598 Chenopodium quinoa HOM05D006179 ORTHO05D007344 3.2e-23 111.3 64 82.8
EL10Ac4g10106 Beta vulgaris HOM05D006179 ORTHO05D008370 4.2e-23 110.9 64 79.7
ClCG02G022800 Citrullus lanatus HOM05D006179 ORTHO05D008370 4.2e-23 110.9 67 77.6
Haze_23248 Corylus avellana HOM05D006179 ORTHO05D008370 4.2e-23 110.9 68 79.4
Sabra09G0052200 Salix brachista HOM05D006179 ORTHO05D008370 4.2e-23 110.9 69 79.7
Nn2g14782 Nelumbo nucifera HOM05D006179 ORTHO05D008370 5.5e-23 110.5 67 79.1
Thecc.09G246900 Theobroma cacao HOM05D006179 ORTHO05D008370 5.5e-23 110.5 68 77.9
MELO3C014557.2 Cucumis melo HOM05D006179 ORTHO05D008370 7.2e-23 110.2 68 76.5
CsaV3_6G038930 Cucumis sativus L. HOM05D006179 ORTHO05D008370 7.2e-23 110.2 68 77.9
Glyma.14G035700 Glycine max HOM05D006179 ORTHO05D008370 7.2e-23 110.2 70 77.1
Gohir.A07G121100 Gossypium hirsutum HOM05D006179 ORTHO05D008370 7.2e-23 110.2 68 76.5
QL01p016926 Quercus lobata HOM05D006179 ORTHO05D008370 7.2e-23 110.2 68 77.9
Gohir.D07G125300 Gossypium hirsutum HOM05D006179 ORTHO05D008370 9.4e-23 109.8 68 76.5
Gorai.001G135100 Gossypium raimondii HOM05D006179 ORTHO05D008370 9.4e-23 109.8 68 76.5
unitig_62.g23875 Utricularia gibba HOM05D006179 ORTHO05D008370 9.4e-23 109.8 71 74.6
CiPaw.14G111900 Carya illinoinensis HOM05D006179 ORTHO05D008370 1.2e-22 109.4 68 80.9
SalBow6G4024 Salvia bowleyana HOM05D006179 ORTHO05D008370 1.2e-22 109.4 68 77.9
COL.COLO4_24491 Corchorus olitorius HOM05D006179 ORTHO05D008370 1.6e-22 109.0 68 75.0
PSO339G0647 Papaver somniferum HOM05D006179 ORTHO05D008370 1.6e-22 109.0 68 77.9
arahy.Tifrunner.gnm1.ann1.0RM1GA Arachis hypogaea HOM05D006179 ORTHO05D008370 2.7e-22 108.2 61 82.0
arahy.Tifrunner.gnm1.ann1.66DN5N Arachis hypogaea HOM05D006179 ORTHO05D008370 2.7e-22 108.2 61 82.0
Sed0005347 Sechium edule HOM05D006179 ORTHO05D008370 2.7e-22 108.2 68 75.0
Aqoxy1G00395 Aquilegia oxysepala HOM05D006179 ORTHO05D008370 3.6e-22 107.8 68 75.0
Ca_06199_v3 Cicer arietinum L. HOM05D006179 ORTHO05D008370 3.6e-22 107.8 62 80.6
Migut.D00669 Erythranthe guttata HOM05D006179 ORTHO05D008370 3.6e-22 107.8 68 77.9
LjContig00564g0004002 Lotus japonicus HOM05D006179 ORTHO05D008370 3.6e-22 107.8 68 75.0
Lalb_Chr04g0249261 Lupinus albus HOM05D006179 ORTHO05D008370 3.6e-22 107.8 65 76.9
PSO384G2846 Papaver somniferum HOM05D006179 ORTHO05D008370 3.6e-22 107.8 68 76.5
Cpa.g.sc157.57 Carica papaya HOM05D006179 ORTHO05D008370 4.7e-22 107.5 68 73.5
Glyma.02G279000 Glycine max HOM05D006179 ORTHO05D008370 4.7e-22 107.5 70 72.9
Manes.02G138400 Manihot esculenta HOM05D006179 ORTHO05D008370 4.7e-22 107.5 68 77.9
Phvul.008G201800 Phaseolus vulgaris HOM05D006179 ORTHO05D008370 4.7e-22 107.5 70 74.3
Ah.04g159740 Amaranthus hybridus HOM05D006179 ORTHO05D008370 8.0e-22 106.7 69 75.4
TPR.G16411 Trifolium pratense HOM05D006179 ORTHO05D008370 1.4e-21 105.9 62 79.0
VMungo0647G1137 Vigna mungo HOM05D006179 ORTHO05D008370 1.4e-21 105.9 67 74.6
Medtr5g089330 Medicago truncatula HOM05D006179 ORTHO05D008370 1.8e-21 105.5 62 77.4
Lsat_1_v5_gn_5_65341 Lactuca sativa HOM05D006179 ORTHO05D008370 2.3e-21 105.1 60 80.0
Psat2g020720 Pisum sativum HOM05D006179 ORTHO05D008370 2.3e-21 105.1 62 77.4
CANSAT54G1770 Cannabis sativa HOM05D006179 ORTHO05D008370 3.0e-21 104.8 68 72.1
HanXRQChr13g0390131 Helianthus annuus HOM05D006179 ORTHO05D008370 5.2e-21 104.0 65 73.8
TWI79G0794 Tripterygium wilfordii HOM05D006179 ORTHO05D008370 5.2e-21 104.0 68 70.6
TPR.G16393 Trifolium pratense HOM05D006179 ORTHO05D008370 8.8e-21 103.2 68 73.5
TWI31G1173 Tripterygium wilfordii HOM05D006179 ORTHO05D008370 8.8e-21 103.2 68 70.6
ATR0621G006 Amborella trichopoda HOM05D006179 ORTHO05D008370 1.5e-20 102.4 62 79.0
TAR623G0610 Trochodendron aralioides HOM05D006179 ORTHO05D008370 4.4e-20 100.9 68 70.6
Aa31LG1G8830 Aethionema arabicum HOM05D006179 ORTHO05D008370 7.4e-20 100.1 65 69.2
CARHR193590 Cardamine hirsuta HOM05D006179 ORTHO05D008370 7.4e-20 100.1 68 70.6
CDE02G1620 Ceratophyllum demersum HOM05D006179 ORTHO05D008370 9.7e-20 99.8 68 70.6
THA.LOC104811194 Tarenaya hassleriana HOM05D006179 ORTHO05D008370 1.3e-19 99.4 69 68.1
AL6G30860 Arabidopsis lyrata HOM05D006179 ORTHO05D008370 2.2e-19 98.6 71 64.8
BcaB01g04864 Brassica carinata HOM05D006179 ORTHO05D008370 2.2e-19 98.6 68 67.6
Thhalv10014227m.g Eutrema salsugineum HOM05D006179 ORTHO05D008370 2.2e-19 98.6 68 69.1
Sp6g25040 Schrenkiella parvula HOM05D006179 ORTHO05D008370 2.8e-19 98.2 68 67.6
Carub.0006s1771 Capsella rubella HOM05D006179 ORTHO05D008370 3.7e-19 97.8 71 66.2
AT5G19370 Arabidopsis thaliana HOM05D006179 ORTHO05D008370 8.2e-19 96.7 68 64.7
Nn7g36750 Nelumbo nucifera HOM05D006179 ORTHO05D008370 1.4e-18 95.9 67 68.7
C03p11040 Brassica napus HOM05D006179 ORTHO05D008370 3.1e-18 94.7 73 64.4
CAN.G1305.17 Capsicum annuum HOM05D006179 ORTHO05D008370 3.1e-18 94.7 71 64.8
BolC3t13573H Brassica oleracea HOM05D006179 ORTHO05D008370 4.1e-18 94.4 68 66.2
A03p09460 Brassica napus HOM05D006179 ORTHO05D008370 5.3e-18 94.0 68 63.2
BraA03t10264Z Brassica rapa HOM05D006179 ORTHO05D008370 5.3e-18 94.0 68 63.2
Os07g0687500 Oryza sativa ssp. japonica HOM05D006179 ORTHO05D008370 5.3e-18 94.0 61 73.8
A02p05510 Brassica napus HOM05D006179 ORTHO05D008370 3.5e-17 91.3 68 63.2
BraA02t05502Z Brassica rapa HOM05D006179 ORTHO05D008370 3.5e-17 91.3 68 63.2
Zm00001eb331180 Zea mays HOM05D006179 ORTHO05D008370 3.5e-17 91.3 60 73.3
Peaxi162Scf00272g00828 Petunia axillaris HOM05D006179 ORTHO05D008370 7.7e-17 90.1 51 78.4
AagrBONN_evm.TU.Sc2ySwM_117.3174 Anthoceros agrestis HOM05D006179 ORTHO05D008370 1.7e-16 89.0 76 57.9
BcaC03g13669 Brassica carinata HOM05D006179 ORTHO05D008370 1.7e-16 89.0 68 63.2
BNapus_Darmor_BZH_scaffold_38p02550 Brassica napus HOM05D006179 ORTHO05D008370 1.7e-16 89.0 68 63.2
SMO145G0007 Selaginella moellendorffii HOM05D006179 ORTHO05D008370 2.2e-16 88.6 66 69.7
CBR_g54969 Chara braunii HOM05D006179 ORTHO05D008370 6.5e-16 87.0 60 66.7
Mapoly0003s0043 Marchantia polymorpha HOM05D006179 ORTHO05D008370 4.2e-15 84.3 66 63.6
SalBow6G2129 Salvia bowleyana HOM05D006179 ORTHO05D353266 8.0e-14 80.1 55 72.7
Pp3c3_13280 Physcomitrium patens HOM05D006179 ORTHO05D008370 8.8e-13 76.6 74 52.7
HPP92_028459 Vanilla planifolia HOM05D006179 ORTHO05D008370 1.6e-09 65.9 33 84.8
SEGI_16296 Sequoiadendron giganteum HOM05D006179 ORTHO05D008370 2.7e-09 65.1 33 84.8
AUR62042212 Chenopodium quinoa HOM05D006179 ORTHO05D008370 6.5e-08 60.5 41 73.2
BcaB01g05143 Brassica carinata HOM05D006179 ORTHO05D008370 2.1e-06 55.5 29 75.9


User provided reference genes

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