Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040020 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 5.8e-155 550.8 272 100.0
CSS0041515 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 6.3e-109 397.9 273 78.4
CSS0017527 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 3.4e-107 392.1 271 75.6
CSS0001367 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 8.5e-106 387.5 258 77.1
CSS0047616 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 8.5e-74 281.2 292 56.2
CSS0037204 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 7.2e-73 278.1 297 54.9
CSS0007178 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 5.7e-70 268.5 296 54.1
CSS0010902 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 8.9e-63 244.6 297 50.5
Rhsim12G0092900 Rhododendron simsii HOM05D009300 ORTHO05D010234 2.7e-27 126.7 209 37.8
Rhsim01G0128900 Rhododendron simsii HOM05D009300 ORTHO05D010234 2.9e-21 106.7 265 28.7
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.4e-20 104.4 189 34.9
vmacro13454 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.6e-19 100.9 226 34.1
Rhsim10G0179100 Rhododendron simsii HOM05D009300 ORTHO05D010234 3.5e-19 99.8 120 49.2
vmacro12139 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 3.5e-19 99.8 298 28.9
vmacro00531 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 4.6e-19 99.4 281 28.5
vmacro12141 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 6.0e-19 99.0 254 30.3
vmacro14328 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 6.2e-16 89.0 256 27.7
vmacro13356 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 3.1e-15 86.7 198 28.8
RhsimUnG0101600 Rhododendron simsii HOM05D009300 ORTHO05D010234 4.0e-15 86.3 165 29.7
CSS0036223 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 4.5e-14 82.8 62 61.3
RhsimUnG0074200 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.7e-13 80.9 89 47.2
Rhsim05G0212100 Rhododendron simsii HOM05D007798 ORTHO05D009882 6.4e-13 79.0 217 27.2
Rhsim07G0185300 Rhododendron simsii HOM05D000107 ORTHO05D003213 4.2e-12 76.3 83 48.2
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 4.2e-12 76.3 285 24.2
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 9.3e-12 75.1 285 24.2
CSS0015616 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.2e-11 74.7 145 37.9
CSS0034635 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D003213 4.6e-11 72.8 33 93.9
RhsimUnG0025000 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.6e-11 72.8 126 35.7
Hma1.2p1_0101F.1_g049380 Hydrangea macrophylla HOM05D005507 ORTHO05D009882 2.3e-10 70.5 118 34.7
Rhsim06G0049000 Rhododendron simsii HOM05D009300 ORTHO05D010234 5.1e-10 69.3 103 39.8
CSS0020531 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 8.7e-10 68.6 33 87.9
Rhsim06G0120600 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.5e-09 67.8 206 24.8
Rhsim11G0014100 Rhododendron simsii HOM05D009300 ORTHO05D010234 3.3e-09 66.6 74 48.6
Rhsim10G0213800 Rhododendron simsii HOM05D008549 ORTHO05D010234 4.3e-09 66.2 273 23.8
CSS0004305 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 5.6e-09 65.9 182 26.9
vmacro04245 Vaccinium macrocarpon HOM05D017338 ORTHO05D010234 7.4e-09 65.5 282 25.2
Actinidia39405 Actinidia chinensis HOM05D007798 ORTHO05D009882 1.3e-08 64.7 94 36.2
Actinidia33688 Actinidia chinensis HOM05D007798 ORTHO05D009882 1.6e-08 64.3 96 38.5
Hma1.2p1_0613F.1_g189140 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 1.6e-08 64.3 138 29.0
MBI07_g22513_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.1e-08 63.9 155 29.0
CSS0029753 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.8e-08 63.5 248 23.4
Rhsim04G0140300 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.7e-08 63.2 251 27.9
CSS0048637 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 4.8e-08 62.8 71 39.4
Rhsim06G0127000 Rhododendron simsii HOM05D009565 ORTHO05D012252 4.8e-08 62.8 200 24.5
MBI16_g20833_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.2e-08 62.4 151 27.8
CSS0002050 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 8.1e-08 62.0 47 63.8
CSS0011165 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 8.1e-08 62.0 70 48.6
CSS0019851 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 8.1e-08 62.0 70 48.6
MELO3C027970.2 Cucumis melo HOM05D001963 ORTHO05D001863 8.1e-08 62.0 126 29.4
Rhsim01G0162400 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.1e-08 62.0 136 30.9
Rhsim01G0162500 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.1e-08 62.0 136 30.9
Rhsim10G0126600 Rhododendron simsii HOM05D009565 ORTHO05D012252 8.1e-08 62.0 200 24.0
CSS0008205 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.1e-07 61.6 248 23.0
CSS0033268 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.1e-07 61.6 248 23.0
CSS0047376 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.1e-07 61.6 248 22.2
MBI13_g12520_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.1e-07 61.6 151 29.1
MBI17_g38326_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.1e-07 61.6 105 33.3
Actinidia04231 Actinidia chinensis HOM05D007798 ORTHO05D009882 1.4e-07 61.2 99 37.4
CSS0045362 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 1.4e-07 61.2 72 47.2
CSS0007087 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.8e-07 60.8 145 35.2
MELO3C035485.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.8e-07 60.8 140 29.3
MBI11_g33696_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.8e-07 60.8 152 29.6
MBI14_g01819_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.8e-07 60.8 151 27.8
MBI19_g18856_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.8e-07 60.8 155 27.1
Rhsim04G0111400 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.8e-07 60.8 177 26.0
Rhsim09G0079100 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.8e-07 60.8 202 25.2
CSS0034332 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.4e-07 60.5 248 23.0
MELO3C028240.2 Cucumis melo HOM05D001963 ORTHO05D001863 2.4e-07 60.5 111 31.5
MELO3C030180.2 Cucumis melo HOM05D001963 ORTHO05D001863 2.4e-07 60.5 112 30.4
MBI14_g16528_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.4e-07 60.5 105 32.4
Rhsim11G0057000 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.4e-07 60.5 216 26.4
CSS0008322 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 3.1e-07 60.1 72 45.8
CSS0021747 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.1e-07 60.1 248 22.6
MELO3C032745.2 Cucumis melo HOM05D001963 ORTHO05D001863 3.1e-07 60.1 97 33.0
MBI04_g25418_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.1e-07 60.1 122 29.5
MBI19_g01025_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.1e-07 60.1 152 28.9
CSS0019606 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 4.0e-07 59.7 71 36.6
MELO3C030815.2 Cucumis melo HOM05D001963 ORTHO05D001863 4.0e-07 59.7 105 33.3
MELO3C033641.2 Cucumis melo HOM05D001963 ORTHO05D001863 4.0e-07 59.7 111 30.6
MELO3C034455.2 Cucumis melo HOM05D001963 ORTHO05D001863 4.0e-07 59.7 111 31.5
MBI13_g26213_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.0e-07 59.7 151 27.8
MBI19_g18851_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.0e-07 59.7 155 27.7
CSS0014258 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 5.3e-07 59.3 72 45.8
CSS0020249 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 5.3e-07 59.3 72 45.8
CSS0020818 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 5.3e-07 59.3 72 45.8
CSS0038432 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 5.3e-07 59.3 72 41.7
MELO3C028156.2 Cucumis melo HOM05D001963 ORTHO05D001863 5.3e-07 59.3 111 31.5
MELO3C034953.2 Cucumis melo HOM05D001963 ORTHO05D001863 5.3e-07 59.3 120 30.8
Dinv13764 Davidia involucrata HOM05D011313 ORTHO05D013316 5.3e-07 59.3 137 31.4
MBI05_g15995_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.3e-07 59.3 104 32.7
QL04p082690 Quercus lobata HOM05D007798 ORTHO05D009882 5.3e-07 59.3 271 22.9
CSS0002056 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 6.9e-07 58.9 71 36.6
CSS0009398 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 6.9e-07 58.9 71 36.6
QL02p083298 Quercus lobata HOM05D007798 ORTHO05D009882 6.9e-07 58.9 266 24.1
RcHm_v2.0_Chr1g0381191 Rosa chinensis HOM05D008705 ORTHO05D000669 6.9e-07 58.9 126 34.1
RcHm_v2.0_Chr3g0486961 Rosa chinensis HOM05D008705 ORTHO05D000669 6.9e-07 58.9 142 33.1
RcHm_v2.0_Chr7g0214031 Rosa chinensis HOM05D008705 ORTHO05D000669 6.9e-07 58.9 126 34.1
CSS0030614 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 9.0e-07 58.5 71 36.6
MELO3C034992.2 Cucumis melo HOM05D001963 ORTHO05D001863 9.0e-07 58.5 142 28.2
MBI07_g41667_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.0e-07 58.5 151 27.2
Rhsim01G0156700 Rhododendron simsii HOM05D007798 ORTHO05D009882 9.0e-07 58.5 186 24.2
CSS0015286 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 1.2e-06 58.2 72 44.4
CSS0015949 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 1.2e-06 58.2 72 45.8
MELO3C034470.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.2e-06 58.2 97 33.0
MBI10_g06414_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.2e-06 58.2 140 29.3
MELO3C027924.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.5e-06 57.8 122 28.7
Actinidia36705 Actinidia chinensis HOM05D007798 ORTHO05D009882 2.0e-06 57.4 90 35.6
MELO3C029550.2 Cucumis melo HOM05D001963 ORTHO05D001863 2.0e-06 57.4 106 31.1
Actinidia03841 Actinidia chinensis HOM05D007798 ORTHO05D009882 2.6e-06 57.0 129 29.5
CSS0007628 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 2.6e-06 57.0 29 82.8
MELO3C031923.2 Cucumis melo HOM05D001963 ORTHO05D001863 2.6e-06 57.0 105 34.3
MBI14_g25533_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.6e-06 57.0 151 27.2
MBI18_g19501_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.6e-06 57.0 104 34.6
MBI19_g27593_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.6e-06 57.0 169 26.0
CSS0019759 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 3.4e-06 56.6 142 36.6
MBI08_g40514_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.4e-06 56.6 102 32.4
CSS0049548 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 5.8e-06 55.8 50 54.0
Dinv11320 Davidia involucrata HOM05D000791 ORTHO05D000669 7.6e-06 55.5 129 26.4
FAN09G3738 Fragaria x ananassa HOM05D008705 ORTHO05D001863 7.6e-06 55.5 184 25.5
MBI12_g43234_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.6e-06 55.5 149 26.8
QL05p006610 Quercus lobata HOM05D007798 ORTHO05D009882 7.6e-06 55.5 258 20.5
QL05p075545 Quercus lobata HOM05D007798 ORTHO05D009882 7.6e-06 55.5 263 22.1
SGA_v2.0_scaffold752G53551 Striga asiatica HOM05D025956 ORTHO05D000669 7.6e-06 55.5 137 27.7
CSS0007712 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 1.0e-05 55.1 143 29.4
MBI05_g43492_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.0e-05 55.1 130 27.7


User provided reference genes

Program Settings